RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 FAM167A-AS1Q96KT0 104 aa10.13□□□□□ -0.79
PTCH1-212ENST00000546744 Q6ZS92 163 aa10.13□□□□□ -0.79
PTCH1-212ENST00000546744 LINC00173Q6ZV60 143 aa10.13□□□□□ -0.79
PTCH1-212ENST00000546744 BAALC-AS2P0C853 105 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 ROS1P08922 2347 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 A0A087WWL8 130 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 FAM236AA0A1B0GUQ0 79 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 FAM236BA0A1B0GV22 79 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 NDUFA4O00483 81 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 MED14OSP0DP75 135 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 ODF1Q14990 250 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 LINC01560Q8TB33 94 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 TIMM17AQ99595 171 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 KAAG1Q9UBP8 84 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 DOPEY2Q9Y3R5 2298 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 CACNA1BQ00975 2339 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 UQCRQO14949 82 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 C5orf47Q569G3 176 aa10.12□□□□□ -0.79
PTCH1-212ENST00000546744 IGHV1OR15-1A0A075B7D0 117 aa10.11□□□□□ -0.79
PTCH1-212ENST00000546744 IGLV1-44P01699 117 aa10.11□□□□□ -0.79
PTCH1-212ENST00000546744 EGR2P11161 476 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-212ENST00000546744 C7orf69Q9H7B7 122 aa10.11□□□□□ -0.79
PTCH1-212ENST00000546744 IGLV3-9A0A075B6K5 115 aa10.11□□□□□ -0.79
PTCH1-212ENST00000546744 C19orf71A6NCJ1 209 aa10.11□□□□□ -0.79
PTCH1-212ENST00000546744 KNCNA6PVL3 124 aa10.11□□□□□ -0.79
PTCH1-212ENST00000546744 SPANXB1Q9NS25 103 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-212ENST00000546744 MYO7BQ6PIF6 2116 aa10.11□□□□□ -0.79
PTCH1-212ENST00000546744 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
PTCH1-212ENST00000546744 NDUFV3P56181 108 aaKnown RBP10.1□□□□□ -0.79
PTCH1-212ENST00000546744 C1orf43Q9BWL3 253 aa10.1□□□□□ -0.79
PTCH1-212ENST00000546744 DSCR8Q96T75 97 aa10.1□□□□□ -0.79
PTCH1-212ENST00000546744 A4D1N5 150 aa10.1□□□□□ -0.79
PTCH1-212ENST00000546744 ZNF524Q96C55 264 aa10.1□□□□□ -0.79
PTCH1-212ENST00000546744 ICOSQ9Y6W8 199 aa10.1□□□□□ -0.79
PTCH1-212ENST00000546744 ANXA2RQ3ZCQ2 193 aa10.1□□□□□ -0.79
PTCH1-212ENST00000546744 Q6ZR03 302 aa10.1□□□□□ -0.79
PTCH1-212ENST00000546744 WFDC12Q8WWY7 111 aa10.1□□□□□ -0.79
PTCH1-212ENST00000546744 ZNF625Q96I27 306 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-212ENST00000546744 KMT2EQ8IZD2 1858 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 hADV29S1A0JD25 119 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 ORMDL1Q9P0S3 153 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 LY6G6EA0A0G2JKS1 128 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 C10orf142B7Z368 130 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 ZNF134P52741 427 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 Q0VFX4 171 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 U3KQA8 63 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 FER1L5A0AVI2 2057 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 C11orf86A6NJI1 115 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 F8WEM9 126 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 IMUPQ9GZP8 106 aa10.09□□□□□ -0.79
PTCH1-212ENST00000546744 HAMPP81172 84 aa10.08□□□□□ -0.8
PTCH1-212ENST00000546744 JMJD7-PLA2G4BH0Y9G9 81 aa10.08□□□□□ -0.8
PTCH1-212ENST00000546744 P0C879 139 aa10.08□□□□□ -0.8
PTCH1-212ENST00000546744 DUX4L9Q6RFH8 374 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-212ENST00000546744 WDR87Q6ZQQ6 2873 aa10.08□□□□□ -0.8
PTCH1-212ENST00000546744 SPATA25Q9BR10 227 aa10.08□□□□□ -0.8
PTCH1-212ENST00000546744 TMEM243Q9BU79 118 aa10.08□□□□□ -0.8
PTCH1-212ENST00000546744 PROK2Q9HC23 129 aa10.08□□□□□ -0.8
PTCH1-212ENST00000546744 CDH23Q9H251 3354 aa10.08□□□□□ -0.8
PTCH1-212ENST00000546744 A0A1B0GX51 115 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 H3BUA1 57 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 DSCR9P59020 149 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 RNF183Q96D59 192 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 USF3Q68DE3 2245 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 PF4P02776 101 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 IGFL4Q6B9Z1 124 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 MBD6Q96DN6 1003 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 CCL19Q99731 98 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 TRGV1A0A0A0MS02 117 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 LOXP28300 417 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-212ENST00000546744 TOMM6Q96B49 74 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 PCDH15Q96QU1 1955 aa10.07□□□□□ -0.8
PTCH1-212ENST00000546744 UBE2E1P51965 193 aa10.06□□□□□ -0.8
PTCH1-212ENST00000546744 ATRXP46100 2492 aa10.06□□□□□ -0.8
PTCH1-212ENST00000546744 TRAV26-2A0A0B4J265 109 aa10.06□□□□□ -0.8
PTCH1-212ENST00000546744 F6UB75 175 aa10.06□□□□□ -0.8
PTCH1-212ENST00000546744 MUC6Q6W4X9 2439 aa10.06□□□□□ -0.8
PTCH1-212ENST00000546744 NDPQ00604 133 aa10.06□□□□□ -0.8
PTCH1-212ENST00000546744 PATE2Q6UY27 113 aa10.06□□□□□ -0.8
PTCH1-212ENST00000546744 EML6Q6ZMW3 1958 aa10.06□□□□□ -0.8
PTCH1-212ENST00000546744 IGHG2P01859 326 aa10.05□□□□□ -0.8
PTCH1-212ENST00000546744 LINC01619G3V211 115 aa10.05□□□□□ -0.8
PTCH1-212ENST00000546744 AGPAT4-IT1Q9H0P7 198 aa10.05□□□□□ -0.8
PTCH1-212ENST00000546744 CEP192Q8TEP8 1941 aa10.05□□□□□ -0.8
PTCH1-212ENST00000546744 COX6B1P14854 86 aa10.05□□□□□ -0.8
PTCH1-212ENST00000546744 CRLF1O75462 422 aa10.05□□□□□ -0.8
PTCH1-212ENST00000546744 NDUFA11Q86Y39 141 aa10.04□□□□□ -0.8
PTCH1-212ENST00000546744 BPTFQ12830 3046 aa10.04□□□□□ -0.8
PTCH1-212ENST00000546744 PDE6GP18545 87 aa10.04□□□□□ -0.8
PTCH1-212ENST00000546744 YLPM1P49750 1951 aaKnown RBP10.04□□□□□ -0.8
PTCH1-212ENST00000546744 IGHV3OR16-10A0A075B7F0 116 aa10.03□□□□□ -0.8
PTCH1-212ENST00000546744 IGHV1-69P01742 117 aa10.03□□□□□ -0.8
PTCH1-212ENST00000546744 MUSTN1Q8IVN3 82 aa10.03□□□□□ -0.8
PTCH1-212ENST00000546744 LYPD2Q6UXB3 125 aa10.03□□□□□ -0.8
PTCH1-212ENST00000546744 SLC25A29Q8N8R3 303 aa10.03□□□□□ -0.8
PTCH1-212ENST00000546744 PCNX2A6NKB5 2137 aa10.03□□□□□ -0.8
PTCH1-212ENST00000546744 COL4A2P08572 1712 aa10.03□□□□□ -0.8
PTCH1-212ENST00000546744 WISP1O95388 367 aa10.03□□□□□ -0.8
PTCH1-212ENST00000546744 ATP5EP2Q5VTU8 51 aa10.03□□□□□ -0.8
PTCH1-212ENST00000546744 RNF152Q8N8N0 203 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms