RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 RTL8AQ9BWD3 113 aa2.59□□□□□ -1.99
CPNE8-204ENST00000546603 SPANXDQ9BXN6 97 aa2.59□□□□□ -1.99
CPNE8-204ENST00000546603 MRPL32Q9BYC8 188 aaKnown RBP2.59□□□□□ -1.99
CPNE8-204ENST00000546603 C8orf17Q9NRJ1 99 aa2.59□□□□□ -1.99
CPNE8-204ENST00000546603 SPANXCQ9NY87 97 aa2.59□□□□□ -1.99
CPNE8-204ENST00000546603 SMPXQ9UHP9 88 aa2.59□□□□□ -1.99
CPNE8-204ENST00000546603 MPC1Q9Y5U8 109 aa2.59□□□□□ -1.99
CPNE8-204ENST00000546603 V9GYV3 84 aa2.59□□□□□ -1.99
CPNE8-204ENST00000546603 COL4A2P08572 1712 aa2.59□□□□□ -2
CPNE8-204ENST00000546603 ATG2BQ96BY7 2078 aa2.59□□□□□ -2
CPNE8-204ENST00000546603 IGKV1D-43A0A0B4J1Z2 117 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 TRAV8-6A0A0B4J262 113 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 A0A1B0GX78 115 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 TMEM189A5PLL7 270 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 FNDC10F2Z333 226 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 BPY2O14599 106 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 COX7A2P2O60397 106 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 APOMO95445 188 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 IGKV1D-33P01593 117 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 IGKV1-33P01594 117 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 IGKV1-5P01602 117 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 IGLV3-1P01715 115 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 ORM1P02763 201 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 SPINK8P0C7L1 97 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 CXCL12P48061 93 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 UBE2L3P68036 154 aaKnown RBP2.58□□□□□ -2
CPNE8-204ENST00000546603 PSG4Q00888 419 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 GUSBP1Q15486 140 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 Q6AWC8 147 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 EBLN2Q6P2I7 272 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 SPATA12Q7Z6I5 190 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 RPS19BP1Q86WX3 136 aaKnown RBP2.58□□□□□ -2
CPNE8-204ENST00000546603 PDPNQ86YL7 162 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 RPRMLQ8N4K4 120 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 DRAM1Q8N682 238 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 TEX29Q8N6K0 151 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 SLC37A2Q8TED4 501 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 H1FXQ92522 213 aaKnown RBP2.58□□□□□ -2
CPNE8-204ENST00000546603 TMEM243Q9BU79 118 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 OR2H1Q9GZK4 316 aa2.58□□□□□ -2
CPNE8-204ENST00000546603 RNASE7Q9H1E1 156 aaKnown RBP2.58□□□□□ -2
CPNE8-204ENST00000546603 AMMECR1Q9Y4X0 333 aaPredicted RBP2.58□□□□□ -2
CPNE8-204ENST00000546603 TNRC6AQ8NDV7 1962 aaKnown RBP2.58□□□□□ -2
CPNE8-204ENST00000546603 IGHV1OR15-9A0A0B4J2B8 117 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 IGHV1-69DA0A0B4J2H0 117 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 IGHV1-24A0A0C4DH33 117 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 C2orf70A6NJV1 201 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 HIGD1CA8MV81 97 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 F2Z2F3 143 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 J3QT63 122 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 SYNGR1O43759 233 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 SNCGO76070 127 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 CLPSP04118 112 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 SLC25A5P05141 298 aaKnown RBP2.57□□□□□ -2
CPNE8-204ENST00000546603 C8orf88P0DMB2 117 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 NPPCP23582 126 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 DSCR4P56555 118 aaPredicted RBP2.57□□□□□ -2
CPNE8-204ENST00000546603 SYNJ2BPP57105 145 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 KRTAP12-3P60328 96 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 SRSF6Q13247 344 aaKnown RBP2.57□□□□□ -2
CPNE8-204ENST00000546603 RNASE13Q5GAN3 156 aaKnown RBP2.57□□□□□ -2
CPNE8-204ENST00000546603 LINC01545Q5VT33 79 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 C10orf113Q5VZT2 155 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 MIC13Q5XKP0 118 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 TMEM42Q69YG0 159 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 OR8A1Q8NGG7 326 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 OR4A5Q8NH83 315 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 OR1L1Q8NH94 360 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 FMC1Q96HJ9 113 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 GPR82Q96P67 336 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 NABP2Q9BQ15 211 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 HES4Q9HCC6 221 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 FAM60AQ9NP50 221 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 IDI2-AS1Q9NZ38 188 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 PRNDQ9UKY0 176 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 BOKQ9UMX3 212 aaPredicted RBP2.57□□□□□ -2
CPNE8-204ENST00000546603 HILPDAQ9Y5L2 63 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 MYO7BQ6PIF6 2116 aa2.57□□□□□ -2
CPNE8-204ENST00000546603 FBN1P35555 2871 aaKnown RBP2.57□□□□□ -2
CPNE8-204ENST00000546603 KIAA2026Q5HYC2 2103 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 IGLV3-32A0A0A0MS00 114 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 IGKV1-12A0A0C4DH73 117 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 A0A1B0GUT8 65 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 C5orf49A4QMS7 147 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 MRPL33O75394 65 aaKnown RBP2.56□□□□□ -2
CPNE8-204ENST00000546603 CNIH1O95406 144 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 IGKV1D-12P01611 117 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 CRYGSP22914 178 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 FCER1GP30273 86 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 MYCNOSP40205 109 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 FOXA3P55318 350 aaPredicted RBP2.56□□□□□ -2
CPNE8-204ENST00000546603 CCL7P80098 99 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 ERHP84090 104 aaKnown RBP2.56□□□□□ -2
CPNE8-204ENST00000546603 RPL18AQ02543 176 aaKnown RBP2.56□□□□□ -2
CPNE8-204ENST00000546603 KLRD1Q13241 179 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 LGALS9BQ3B8N2 356 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 SPINK9Q5DT21 86 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 LGALS9CQ6DKI2 356 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 FOXI2Q6ZQN5 318 aa2.56□□□□□ -2
CPNE8-204ENST00000546603 Q6ZS92 163 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms