RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 MEF2BQ02080 365 aaPredicted RBP11.94□□□□□ -0.5
LTBR-215ENST00000546296 TDRG1Q3Y452 100 aa11.94□□□□□ -0.5
LTBR-215ENST00000546296 MDFICQ9P1T7 246 aa11.94□□□□□ -0.5
LTBR-215ENST00000546296 VAX2Q9UIW0 290 aa11.94□□□□□ -0.5
LTBR-215ENST00000546296 TRGV1A0A0A0MS02 117 aa11.93□□□□□ -0.5
LTBR-215ENST00000546296 PDE6DO43924 150 aa11.93□□□□□ -0.5
LTBR-215ENST00000546296 LTAP01374 205 aa11.93□□□□□ -0.5
LTBR-215ENST00000546296 Q6ZTI0 123 aa11.93□□□□□ -0.5
LTBR-215ENST00000546296 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
LTBR-215ENST00000546296 ATP5G1P05496 136 aa11.92□□□□□ -0.5
LTBR-215ENST00000546296 BAGE2Q86Y30 109 aa11.92□□□□□ -0.5
LTBR-215ENST00000546296 ZC2HC1AQ96GY0 325 aa11.92□□□□□ -0.5
LTBR-215ENST00000546296 IGHV4-4A0A075B6R2 117 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 F5H768 121 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 SPINK4O60575 86 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 ORM1P02763 201 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 TYMSP04818 313 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 RPL35P42766 123 aaKnown RBP11.91□□□□□ -0.5
LTBR-215ENST00000546296 TCTAP57738 103 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 FAM162BQ5T6X4 162 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 TEX261Q6UWH6 196 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 NHLRC2Q8NBF2 726 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 C11orf52Q96A22 123 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 SPXQ9BT56 116 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 MED9Q9NWA0 146 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 C11orf21Q9P2W6 132 aa11.91□□□□□ -0.5
LTBR-215ENST00000546296 DYNC2H1Q8NCM8 4307 aaKnown RBP11.9□□□□□ -0.5
LTBR-215ENST00000546296 IGHV3-16A0A0C4DH30 117 aa11.9□□□□□ -0.5
LTBR-215ENST00000546296 RBFOX3A6NFN3 312 aa11.9□□□□□ -0.5
LTBR-215ENST00000546296 COX8CQ7Z4L0 72 aa11.9□□□□□ -0.5
LTBR-215ENST00000546296 LINC00612Q8N6U2 182 aa11.9□□□□□ -0.5
LTBR-215ENST00000546296 NDUFAF3Q9BU61 184 aa11.9□□□□□ -0.5
LTBR-215ENST00000546296 MRPL16Q9NX20 251 aaKnown RBP11.9□□□□□ -0.5
LTBR-215ENST00000546296 SH2D1AO60880 128 aa11.89□□□□□ -0.51
LTBR-215ENST00000546296 CRIP1P50238 77 aa11.89□□□□□ -0.51
LTBR-215ENST00000546296 LGALS9BQ3B8N2 356 aa11.89□□□□□ -0.51
LTBR-215ENST00000546296 LYPD6BQ8NI32 183 aa11.89□□□□□ -0.51
LTBR-215ENST00000546296 FAM210BQ96KR6 192 aa11.89□□□□□ -0.51
LTBR-215ENST00000546296 DERL1Q9BUN8 251 aa11.89□□□□□ -0.51
LTBR-215ENST00000546296 LCE6AA0A183 80 aa11.88□□□□□ -0.51
LTBR-215ENST00000546296 B4DEV8 164 aa11.88□□□□□ -0.51
LTBR-215ENST00000546296 OR5I1Q13606 314 aa11.88□□□□□ -0.51
LTBR-215ENST00000546296 APLNQ9ULZ1 77 aa11.88□□□□□ -0.51
LTBR-215ENST00000546296 RAB19A4D1S5 217 aa11.87□□□□□ -0.51
LTBR-215ENST00000546296 M0R036 132 aa11.87□□□□□ -0.51
LTBR-215ENST00000546296 S100A4P26447 101 aaKnown RBP11.87□□□□□ -0.51
LTBR-215ENST00000546296 ZNF674Q2M3X9 581 aa11.87□□□□□ -0.51
LTBR-215ENST00000546296 TMEM88Q6PEY1 159 aa11.87□□□□□ -0.51
LTBR-215ENST00000546296 EIF5A2Q9GZV4 153 aaKnown RBP11.87□□□□□ -0.51
LTBR-215ENST00000546296 PLECQ15149 4684 aaKnown RBP11.86□□□□□ -0.51
LTBR-215ENST00000546296 IGKV3D-20A0A0C4DH25 116 aa11.86□□□□□ -0.51
LTBR-215ENST00000546296 M0R2P5 195 aa11.86□□□□□ -0.51
LTBR-215ENST00000546296 LY6G6CO95867 125 aa11.86□□□□□ -0.51
LTBR-215ENST00000546296 ASIPP42127 132 aa11.86□□□□□ -0.51
LTBR-215ENST00000546296 GNG4P50150 75 aa11.86□□□□□ -0.51
LTBR-215ENST00000546296 CENPWQ5EE01 88 aa11.86□□□□□ -0.51
LTBR-215ENST00000546296 ZNF506Q5JVG8 444 aa11.86□□□□□ -0.51
LTBR-215ENST00000546296 PRR27Q6MZM9 219 aa11.86□□□□□ -0.51
LTBR-215ENST00000546296 PCNPQ8WW12 178 aaKnown RBP11.86□□□□□ -0.51
LTBR-215ENST00000546296 MLST8Q9BVC4 326 aa11.86□□□□□ -0.51
LTBR-215ENST00000546296 TMSB15BA0A087X1C1 80 aa11.85□□□□□ -0.51
LTBR-215ENST00000546296 KRBOX1C9JBD0 128 aa11.85□□□□□ -0.51
LTBR-215ENST00000546296 MGST1P10620 155 aaKnown RBP11.85□□□□□ -0.51
LTBR-215ENST00000546296 TOR2AQ5JU69 321 aa11.85□□□□□ -0.51
LTBR-215ENST00000546296 GRIFINA4D1Z8 144 aa11.84□□□□□ -0.51
LTBR-215ENST00000546296 C9JCJ5 164 aa11.84□□□□□ -0.51
LTBR-215ENST00000546296 IGHV3-53P01767 116 aa11.84□□□□□ -0.51
LTBR-215ENST00000546296 CEBPGP53567 150 aa11.84□□□□□ -0.51
LTBR-215ENST00000546296 RASL10AQ92737 203 aa11.84□□□□□ -0.51
LTBR-215ENST00000546296 C18orf15Q96N68 181 aa11.84□□□□□ -0.51
LTBR-215ENST00000546296 KMT2CQ8NEZ4 4911 aaKnown RBP11.84□□□□□ -0.51
LTBR-215ENST00000546296 HOXA5P20719 270 aa11.83□□□□□ -0.52
LTBR-215ENST00000546296 ZNF876PQ49A33 203 aa11.83□□□□□ -0.52
LTBR-215ENST00000546296 LINC00476Q8WZB0 136 aa11.83□□□□□ -0.52
LTBR-215ENST00000546296 DAZAP1Q96EP5 407 aaKnown RBP11.83□□□□□ -0.52
LTBR-215ENST00000546296 FAM210AQ96ND0 272 aa11.83□□□□□ -0.52
LTBR-215ENST00000546296 TRAV26-1A0A087WT03 109 aa11.82□□□□□ -0.52
LTBR-215ENST00000546296 TMEM250H0YL14 139 aa11.82□□□□□ -0.52
LTBR-215ENST00000546296 NUDT3O95989 172 aa11.82□□□□□ -0.52
LTBR-215ENST00000546296 RNASE3P12724 160 aaKnown RBP11.82□□□□□ -0.52
LTBR-215ENST00000546296 LINC01559Q495D7 138 aa11.82□□□□□ -0.52
LTBR-215ENST00000546296 LGALS9CQ6DKI2 356 aa11.82□□□□□ -0.52
LTBR-215ENST00000546296 C15orf53Q8NAA6 179 aa11.82□□□□□ -0.52
LTBR-215ENST00000546296 C9orf85Q96MD7 179 aa11.82□□□□□ -0.52
LTBR-215ENST00000546296 A0A0J9YY99 117 aa11.81□□□□□ -0.52
LTBR-215ENST00000546296 OR4C5Q8NGB2 326 aa11.81□□□□□ -0.52
LTBR-215ENST00000546296 SMIM12Q96EX1 92 aa11.81□□□□□ -0.52
LTBR-215ENST00000546296 BIN3Q9NQY0 253 aa11.81□□□□□ -0.52
LTBR-215ENST00000546296 TRGV4A0A0C4DH28 118 aa11.8□□□□□ -0.52
LTBR-215ENST00000546296 PGPEP1LA6NFU8 196 aa11.8□□□□□ -0.52
LTBR-215ENST00000546296 H3BVH4 76 aa11.8□□□□□ -0.52
LTBR-215ENST00000546296 IGLV2-8P01709 118 aa11.8□□□□□ -0.52
LTBR-215ENST00000546296 ARMS2P0C7Q2 107 aa11.8□□□□□ -0.52
LTBR-215ENST00000546296 RAB14P61106 215 aa11.8□□□□□ -0.52
LTBR-215ENST00000546296 PARLQ9H300 379 aa11.8□□□□□ -0.52
LTBR-215ENST00000546296 IL36BQ9NZH7 164 aa11.8□□□□□ -0.52
LTBR-215ENST00000546296 LYSTQ99698 3801 aa11.8□□□□□ -0.52
LTBR-215ENST00000546296 TRBV20OR9-2A0A075B6H5 130 aa11.79□□□□□ -0.52
LTBR-215ENST00000546296 TRAV4A0A0B4J268 109 aa11.79□□□□□ -0.52
LTBR-215ENST00000546296 SFTA3P0C7M3 94 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms