RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 KLF12Q9Y4X4 402 aa12.48□□□□□ -0.41
CD9-211ENST00000546073 HUWE1Q7Z6Z7 4374 aaKnown RBP12.47□□□□□ -0.41
CD9-211ENST00000546073 SCO2A0A1W2PP80 73 aa12.47□□□□□ -0.41
CD9-211ENST00000546073 F5H768 121 aa12.47□□□□□ -0.41
CD9-211ENST00000546073 ORM1P02763 201 aa12.47□□□□□ -0.41
CD9-211ENST00000546073 LGALS9BQ3B8N2 356 aa12.47□□□□□ -0.41
CD9-211ENST00000546073 TDRG1Q3Y452 100 aa12.47□□□□□ -0.41
CD9-211ENST00000546073 FAM162BQ5T6X4 162 aa12.47□□□□□ -0.41
CD9-211ENST00000546073 EIF5A2Q9GZV4 153 aaKnown RBP12.46□□□□□ -0.41
CD9-211ENST00000546073 BIN3Q9NQY0 253 aa12.46□□□□□ -0.41
CD9-211ENST00000546073 LTAP01374 205 aa12.45□□□□□ -0.42
CD9-211ENST00000546073 DAZAP1Q96EP5 407 aaKnown RBP12.45□□□□□ -0.42
CD9-211ENST00000546073 TP53TG3Q9ULZ0 132 aa12.45□□□□□ -0.42
CD9-211ENST00000546073 IGHV4-4A0A075B6R2 117 aa12.44□□□□□ -0.42
CD9-211ENST00000546073 PLAC8L1A1L4L8 177 aa12.44□□□□□ -0.42
CD9-211ENST00000546073 RBFOX3A6NFN3 312 aa12.44□□□□□ -0.42
CD9-211ENST00000546073 ASIPP42127 132 aa12.44□□□□□ -0.42
CD9-211ENST00000546073 GNG4P50150 75 aa12.44□□□□□ -0.42
CD9-211ENST00000546073 RAB14P61106 215 aa12.44□□□□□ -0.42
CD9-211ENST00000546073 OR5I1Q13606 314 aa12.44□□□□□ -0.42
CD9-211ENST00000546073 B4DEV8 164 aa12.43□□□□□ -0.42
CD9-211ENST00000546073 GNRH2O43555 120 aa12.43□□□□□ -0.42
CD9-211ENST00000546073 RPL35P42766 123 aaKnown RBP12.43□□□□□ -0.42
CD9-211ENST00000546073 TEX261Q6UWH6 196 aa12.43□□□□□ -0.42
CD9-211ENST00000546073 C11orf72Q8NBR9 251 aa12.43□□□□□ -0.42
CD9-211ENST00000546073 C11orf52Q96A22 123 aa12.43□□□□□ -0.42
CD9-211ENST00000546073 M0R2P5 195 aa12.42□□□□□ -0.42
CD9-211ENST00000546073 SPINK4O60575 86 aa12.42□□□□□ -0.42
CD9-211ENST00000546073 MGST1P10620 155 aaKnown RBP12.42□□□□□ -0.42
CD9-211ENST00000546073 ZNF80P51504 273 aaPredicted RBP12.42□□□□□ -0.42
CD9-211ENST00000546073 SLAQ13239 276 aa12.42□□□□□ -0.42
CD9-211ENST00000546073 Q6ZQT7 251 aa12.42□□□□□ -0.42
CD9-211ENST00000546073 Q6ZTI0 123 aa12.42□□□□□ -0.42
CD9-211ENST00000546073 C15orf53Q8NAA6 179 aa12.42□□□□□ -0.42
CD9-211ENST00000546073 SMIM12Q96EX1 92 aa12.42□□□□□ -0.42
CD9-211ENST00000546073 ZC2HC1AQ96GY0 325 aa12.42□□□□□ -0.42
CD9-211ENST00000546073 MDFICQ9P1T7 246 aa12.42□□□□□ -0.42
CD9-211ENST00000546073 LY6G6CO95867 125 aa12.41□□□□□ -0.42
CD9-211ENST00000546073 TYMSP04818 313 aa12.41□□□□□ -0.42
CD9-211ENST00000546073 PRR27Q6MZM9 219 aa12.41□□□□□ -0.42
CD9-211ENST00000546073 COX8CQ7Z4L0 72 aa12.41□□□□□ -0.42
CD9-211ENST00000546073 MRPL16Q9NX20 251 aaKnown RBP12.41□□□□□ -0.42
CD9-211ENST00000546073 IGHV3-16A0A0C4DH30 117 aa12.4□□□□□ -0.42
CD9-211ENST00000546073 SH2D1AO60880 128 aa12.4□□□□□ -0.42
CD9-211ENST00000546073 CEBPGP53567 150 aa12.4□□□□□ -0.42
CD9-211ENST00000546073 NHLRC2Q8NBF2 726 aa12.4□□□□□ -0.42
CD9-211ENST00000546073 SYT8Q8NBV8 401 aa12.4□□□□□ -0.42
CD9-211ENST00000546073 TRGV4A0A0C4DH28 118 aa12.39□□□□□ -0.43
CD9-211ENST00000546073 TMEM250H0YL14 139 aa12.39□□□□□ -0.43
CD9-211ENST00000546073 M0R036 132 aa12.39□□□□□ -0.43
CD9-211ENST00000546073 ZNF674Q2M3X9 581 aa12.39□□□□□ -0.43
CD9-211ENST00000546073 CENPWQ5EE01 88 aa12.39□□□□□ -0.43
CD9-211ENST00000546073 C18orf15Q96N68 181 aa12.39□□□□□ -0.43
CD9-211ENST00000546073 LCE6AA0A183 80 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 XKRY2A2RUG3 117 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 C9JCJ5 164 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 CIDEAO60543 219 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 P0DMU3 169 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 FAM231AP0DMU4 169 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 FAM231CP0DMU5 169 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 ZNF876PQ49A33 203 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 TOR2AQ5JU69 321 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 ZNF506Q5JVG8 444 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 TMEM88Q6PEY1 159 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 UBE2DNLQ8IWF7 75 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 LINC00612Q8N6U2 182 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 OR4C5Q8NGB2 326 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 LYPD6BQ8NI32 183 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 RASL10AQ92737 203 aa12.38□□□□□ -0.43
CD9-211ENST00000546073 NUDT3O95989 172 aa12.37□□□□□ -0.43
CD9-211ENST00000546073 PEA15Q15121 130 aa12.37□□□□□ -0.43
CD9-211ENST00000546073 TMSB15BA0A087X1C1 80 aa12.36□□□□□ -0.43
CD9-211ENST00000546073 RPS20P60866 119 aaKnown RBP12.36□□□□□ -0.43
CD9-211ENST00000546073 LGALS9CQ6DKI2 356 aa12.36□□□□□ -0.43
CD9-211ENST00000546073 PCNPQ8WW12 178 aaKnown RBP12.36□□□□□ -0.43
CD9-211ENST00000546073 FAM210AQ96ND0 272 aa12.36□□□□□ -0.43
CD9-211ENST00000546073 APLNQ9ULZ1 77 aa12.36□□□□□ -0.43
CD9-211ENST00000546073 PHLDA3Q9Y5J5 127 aa12.36□□□□□ -0.43
CD9-211ENST00000546073 RAB19A4D1S5 217 aa12.35□□□□□ -0.43
CD9-211ENST00000546073 KRBOX1C9JBD0 128 aa12.35□□□□□ -0.43
CD9-211ENST00000546073 NDUFS6O75380 124 aaKnown RBP12.35□□□□□ -0.43
CD9-211ENST00000546073 IGHV3-53P01767 116 aa12.35□□□□□ -0.43
CD9-211ENST00000546073 LINC01559Q495D7 138 aa12.35□□□□□ -0.43
CD9-211ENST00000546073 DERL1Q9BUN8 251 aa12.35□□□□□ -0.43
CD9-211ENST00000546073 TRAV26-1A0A087WT03 109 aa12.34□□□□□ -0.43
CD9-211ENST00000546073 TRAV4A0A0B4J268 109 aa12.34□□□□□ -0.43
CD9-211ENST00000546073 IGKV3D-20A0A0C4DH25 116 aa12.34□□□□□ -0.43
CD9-211ENST00000546073 GRIFINA4D1Z8 144 aa12.34□□□□□ -0.43
CD9-211ENST00000546073 P01737 135 aa12.34□□□□□ -0.43
CD9-211ENST00000546073 CRIP1P50238 77 aa12.34□□□□□ -0.43
CD9-211ENST00000546073 LINC00476Q8WZB0 136 aa12.34□□□□□ -0.43
CD9-211ENST00000546073 MLST8Q9BVC4 326 aa12.34□□□□□ -0.43
CD9-211ENST00000546073 IL36BQ9NZH7 164 aa12.34□□□□□ -0.43
CD9-211ENST00000546073 C11orf21Q9P2W6 132 aa12.34□□□□□ -0.43
CD9-211ENST00000546073 PRO0255Q9UI72 69 aa12.34□□□□□ -0.43
CD9-211ENST00000546073 H3BNG1 76 aa12.33□□□□□ -0.44
CD9-211ENST00000546073 PAX4O43316 350 aa12.33□□□□□ -0.44
CD9-211ENST00000546073 ARMS2P0C7Q2 107 aa12.33□□□□□ -0.44
CD9-211ENST00000546073 CCL18P55774 89 aa12.33□□□□□ -0.44
CD9-211ENST00000546073 PTH2Q96A98 100 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms