RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 KCNS1Q96KK3 526 aa7.52□□□□□ -1.21
CIT-218ENST00000546026 MRPL18Q9H0U6 180 aaKnown RBP7.52□□□□□ -1.21
CIT-218ENST00000546026 NIPBLQ6KC79 2804 aaeCLIP7.52□□□□□ -1.21
CIT-218ENST00000546026 JMJD1CQ15652 2540 aa7.51□□□□□ -1.21
CIT-218ENST00000546026 ARMS2P0C7Q2 107 aa7.51□□□□□ -1.21
CIT-218ENST00000546026 TRGC1P0CF51 173 aa7.51□□□□□ -1.21
CIT-218ENST00000546026 RAB4BP61018 213 aa7.51□□□□□ -1.21
CIT-218ENST00000546026 KIR3DS1Q14943 382 aa7.51□□□□□ -1.21
CIT-218ENST00000546026 TDRG1Q3Y452 100 aa7.51□□□□□ -1.21
CIT-218ENST00000546026 ANXA2RQ3ZCQ2 193 aa7.51□□□□□ -1.21
CIT-218ENST00000546026 GFI1BQ5VTD9 330 aa7.51□□□□□ -1.21
CIT-218ENST00000546026 C12orf54Q6X4T0 127 aa7.51□□□□□ -1.21
CIT-218ENST00000546026 C3orf56Q8N813 242 aa7.51□□□□□ -1.21
CIT-218ENST00000546026 SSBP4Q9BWG4 385 aaPredicted RBP7.51□□□□□ -1.21
CIT-218ENST00000546026 CNFNQ9BYD5 112 aa7.51□□□□□ -1.21
CIT-218ENST00000546026 TEP1Q99973 2627 aaKnown RBP7.51□□□□□ -1.21
CIT-218ENST00000546026 TRAV12-3A0A0B4J271 114 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 RBMY1BA6NDE4 496 aaKnown RBP7.5□□□□□ -1.21
CIT-218ENST00000546026 RBMY1EA6NEQ0 496 aaKnown RBP7.5□□□□□ -1.21
CIT-218ENST00000546026 M0R2Z0 102 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 SNAI2O43623 268 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 HIST1H2BKO60814 126 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 APCSP02743 223 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 S100A6P06703 90 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 HIST1H2BJP06899 126 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 OR5AL1P0C617 328 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 RBMY1DP0C7P1 496 aaKnown RBP7.5□□□□□ -1.21
CIT-218ENST00000546026 HIST1H2BOP23527 126 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 HIST1H2BBP33778 126 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 ASIPP42127 132 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 CAMPP49913 170 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 HIST1H2BDP58876 126 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 HIST1H2BCP62807 126 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 CACNG7P62955 275 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 ZNF124Q15973 351 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 HIST2H2BEQ16778 126 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 SPINK13Q1W4C9 94 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.5□□□□□ -1.21
CIT-218ENST00000546026 FAM159AQ6UWV7 190 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 Q6ZQT7 251 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 TRPT1Q86TN4 253 aaKnown RBP7.5□□□□□ -1.21
CIT-218ENST00000546026 STHQ8IWL8 128 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 HIST1H2BHQ93079 126 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 HIST1H2BNQ99877 126 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 HIST1H2BMQ99879 126 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 C20orf144Q9BQM9 153 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 TPPP3Q9BW30 176 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 C19orf73Q9NVV2 129 aa7.5□□□□□ -1.21
CIT-218ENST00000546026 IGHV4-4A0A075B6R2 117 aa7.49□□□□□ -1.21
CIT-218ENST00000546026 CRXO43186 299 aaPredicted RBP7.49□□□□□ -1.21
CIT-218ENST00000546026 WIPF1O43516 503 aa7.49□□□□□ -1.21
CIT-218ENST00000546026 CD7P09564 240 aa7.49□□□□□ -1.21
CIT-218ENST00000546026 ZNF493Q6ZR52 646 aa7.49□□□□□ -1.21
CIT-218ENST00000546026 NAGKQ9UJ70 344 aa7.49□□□□□ -1.21
CIT-218ENST00000546026 SORL1Q92673 2214 aa7.48□□□□□ -1.21
CIT-218ENST00000546026 TRAV12-2A0A075B6T6 113 aa7.48□□□□□ -1.21
CIT-218ENST00000546026 IGHV1OR15-1A0A075B7D0 117 aa7.48□□□□□ -1.21
CIT-218ENST00000546026 GNRH2O43555 120 aa7.48□□□□□ -1.21
CIT-218ENST00000546026 NTF3P20783 257 aa7.48□□□□□ -1.21
CIT-218ENST00000546026 S100A4P26447 101 aaKnown RBP7.48□□□□□ -1.21
CIT-218ENST00000546026 NDUFA6P56556 154 aa7.48□□□□□ -1.21
CIT-218ENST00000546026 NUTF2P61970 127 aaKnown RBP7.48□□□□□ -1.21
CIT-218ENST00000546026 MUC21Q5SSG8 566 aa7.48□□□□□ -1.21
CIT-218ENST00000546026 LINC00467Q9BRT7 94 aa7.48□□□□□ -1.21
CIT-218ENST00000546026 SCRT2Q9NQ03 307 aa7.48□□□□□ -1.21
CIT-218ENST00000546026 ATRQ13535 2644 aa7.48□□□□□ -1.21
CIT-218ENST00000546026 LOC105371267A0A1B0GV96 52 aa7.47□□□□□ -1.21
CIT-218ENST00000546026 C5orf52A6NGY3 159 aa7.47□□□□□ -1.21
CIT-218ENST00000546026 FXYD7P58549 80 aa7.47□□□□□ -1.21
CIT-218ENST00000546026 SLAQ13239 276 aa7.47□□□□□ -1.21
CIT-218ENST00000546026 TWIST1Q15672 202 aa7.47□□□□□ -1.21
CIT-218ENST00000546026 MORN3Q6PF18 240 aaPredicted RBP7.47□□□□□ -1.21
CIT-218ENST00000546026 SPATA3Q8NHX4 192 aa7.47□□□□□ -1.21
CIT-218ENST00000546026 AGRNO00468 2067 aa7.47□□□□□ -1.21
CIT-218ENST00000546026 MAST4O15021 2626 aa7.47□□□□□ -1.21
CIT-218ENST00000546026 TENM1Q9UKZ4 2725 aa7.46□□□□□ -1.21
CIT-218ENST00000546026 TRGV11A0A075B6L2 103 aa7.46□□□□□ -1.22
CIT-218ENST00000546026 H3BVH4 76 aa7.46□□□□□ -1.22
CIT-218ENST00000546026 INSP01308 110 aa7.46□□□□□ -1.22
CIT-218ENST00000546026 RNASE3P12724 160 aaKnown RBP7.46□□□□□ -1.22
CIT-218ENST00000546026 SNRPEP62304 92 aaKnown RBP7.46□□□□□ -1.22
CIT-218ENST00000546026 Q0VG73 95 aa7.46□□□□□ -1.22
CIT-218ENST00000546026 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.22
CIT-218ENST00000546026 GTSCR1Q86UQ5 136 aa7.46□□□□□ -1.22
CIT-218ENST00000546026 TMEM256Q8N2U0 113 aa7.46□□□□□ -1.22
CIT-218ENST00000546026 TMEM191AQ9H0A3 160 aa7.46□□□□□ -1.22
CIT-218ENST00000546026 LOC102724200A0A096LPH7 203 aaPredicted RBP7.45□□□□□ -1.22
CIT-218ENST00000546026 IGHV3-16A0A0C4DH30 117 aa7.45□□□□□ -1.22
CIT-218ENST00000546026 RBMY1A1P0DJD3 496 aaKnown RBP7.45□□□□□ -1.22
CIT-218ENST00000546026 RBMY1CP0DJD4 496 aa7.45□□□□□ -1.22
CIT-218ENST00000546026 IGLL1P15814 213 aa7.45□□□□□ -1.22
CIT-218ENST00000546026 HOXA5P20719 270 aa7.45□□□□□ -1.22
CIT-218ENST00000546026 RBMY1FQ15415 496 aaKnown RBP7.45□□□□□ -1.22
CIT-218ENST00000546026 KIAA1644Q3SXP7 199 aa7.45□□□□□ -1.22
CIT-218ENST00000546026 OR10J3Q5JRS4 329 aa7.45□□□□□ -1.22
CIT-218ENST00000546026 SPANXN1Q5VSR9 72 aa7.45□□□□□ -1.22
CIT-218ENST00000546026 DMRTA1Q5VZB9 504 aa7.45□□□□□ -1.22
CIT-218ENST00000546026 FAM104BQ5XKR9 115 aa7.45□□□□□ -1.22
CIT-218ENST00000546026 SMIM15Q7Z3B0 74 aa7.45□□□□□ -1.22
CIT-218ENST00000546026 OR10AG1Q8NH19 301 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms