RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 IGLV2-18A0A075B6J9 118 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 A0A096LNT2 108 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 SLC25A16P16260 332 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 CEND1Q8N111 149 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 Q8N8P6 123 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 TMEM158Q8WZ71 300 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 FOXC2Q99958 501 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 IGHV1-69DA0A0B4J2H0 117 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 K7ERJ3 54 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 IGHV1-69P01742 117 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 CTSGP08311 255 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 NDPQ00604 133 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 BRD3OSQ6XYD6 125 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 GTSCR1Q86UQ5 136 aa14.44□□□□□ -0.1
MSLN-202ENST00000545450 TEX48A0A1B0GUV7 120 aa14.43□□□□□ -0.1
MSLN-202ENST00000545450 GATA1P15976 413 aaPredicted RBP14.43□□□□□ -0.1
MSLN-202ENST00000545450 ZC2HC1BQ5TFG8 222 aa14.43□□□□□ -0.1
MSLN-202ENST00000545450 Q8N9W7 124 aa14.43□□□□□ -0.1
MSLN-202ENST00000545450 ARPC1AQ92747 370 aa14.43□□□□□ -0.1
MSLN-202ENST00000545450 ZANQ9Y493 2812 aa14.43□□□□□ -0.1
MSLN-202ENST00000545450 NAV2Q8IVL1 2488 aa14.43□□□□□ -0.1
MSLN-202ENST00000545450 IGHV3-23P01764 117 aa14.43□□□□□ -0.1
MSLN-202ENST00000545450 IGHV4-38-2P0DP08 117 aa14.43□□□□□ -0.1
MSLN-202ENST00000545450 RPL24P83731 157 aaKnown RBP14.43□□□□□ -0.1
MSLN-202ENST00000545450 B4DSR2 109 aa14.42□□□□□ -0.1
MSLN-202ENST00000545450 HIF1ANQ9NWT6 349 aa14.42□□□□□ -0.1
MSLN-202ENST00000545450 E9PLD3 99 aa14.41□□□□□ -0.1
MSLN-202ENST00000545450 ERCC8Q13216 396 aa14.41□□□□□ -0.1
MSLN-202ENST00000545450 NHP2Q9NX24 153 aaKnown RBP14.41□□□□□ -0.1
MSLN-202ENST00000545450 HELZ2Q9BYK8 2649 aaKnown RBP14.41□□□□□ -0.1
MSLN-202ENST00000545450 PRSS47A8MTI9 375 aa14.41□□□□□ -0.1
MSLN-202ENST00000545450 CR1P17927 2039 aa14.41□□□□□ -0.1
MSLN-202ENST00000545450 IGHV7-81A0A0B4J1V7 117 aa14.4□□□□□ -0.1
MSLN-202ENST00000545450 PRAC2D3DTV9 90 aa14.4□□□□□ -0.1
MSLN-202ENST00000545450 J3QKU1 62 aa14.4□□□□□ -0.1
MSLN-202ENST00000545450 SCGB2A1O75556 95 aa14.4□□□□□ -0.1
MSLN-202ENST00000545450 AVPP01185 164 aa14.4□□□□□ -0.1
MSLN-202ENST00000545450 PPIFP30405 207 aaKnown RBP14.4□□□□□ -0.1
MSLN-202ENST00000545450 MAPK1IP1LQ8NDC0 245 aa14.4□□□□□ -0.1
MSLN-202ENST00000545450 RBAKDNA6NC62 111 aa14.39□□□□□ -0.11
MSLN-202ENST00000545450 TAL2Q16559 108 aa14.39□□□□□ -0.11
MSLN-202ENST00000545450 DEFB113Q30KQ7 82 aa14.39□□□□□ -0.11
MSLN-202ENST00000545450 TMEM160Q9NX00 188 aa14.39□□□□□ -0.11
MSLN-202ENST00000545450 MRPL35Q9NZE8 188 aaKnown RBP14.39□□□□□ -0.11
MSLN-202ENST00000545450 IGKV3D-20A0A0C4DH25 116 aa14.39□□□□□ -0.11
MSLN-202ENST00000545450 IGLL5B9A064 214 aa14.39□□□□□ -0.11
MSLN-202ENST00000545450 FOXI2Q6ZQN5 318 aa14.39□□□□□ -0.11
MSLN-202ENST00000545450 MAPKAPK5-AS1Q8N8E1 139 aa14.39□□□□□ -0.11
MSLN-202ENST00000545450 BEX4Q9NWD9 120 aaPredicted RBP14.39□□□□□ -0.11
MSLN-202ENST00000545450 CHTOPQ9Y3Y2 248 aaKnown RBP14.39□□□□□ -0.11
MSLN-202ENST00000545450 CSPG4Q6UVK1 2322 aa14.38□□□□□ -0.11
MSLN-202ENST00000545450 F8W1H4 67 aa14.38□□□□□ -0.11
MSLN-202ENST00000545450 HIST2H2BCQ6DN03 193 aa14.38□□□□□ -0.11
MSLN-202ENST00000545450 IL17RELQ6ZVW7 336 aa14.38□□□□□ -0.11
MSLN-202ENST00000545450 NRACQ8N912 160 aa14.38□□□□□ -0.11
MSLN-202ENST00000545450 SAMD13Q5VXD3 122 aa14.37□□□□□ -0.11
MSLN-202ENST00000545450 MYOZ3Q8TDC0 251 aa14.37□□□□□ -0.11
MSLN-202ENST00000545450 TRGV3P03979 118 aa14.37□□□□□ -0.11
MSLN-202ENST00000545450 LAGE3Q14657 143 aa14.37□□□□□ -0.11
MSLN-202ENST00000545450 C11orf21Q9P2W6 132 aa14.37□□□□□ -0.11
MSLN-202ENST00000545450 A0A087WX48 190 aa14.36□□□□□ -0.11
MSLN-202ENST00000545450 CIDEAO60543 219 aa14.36□□□□□ -0.11
MSLN-202ENST00000545450 TMEM219Q86XT9 240 aa14.36□□□□□ -0.11
MSLN-202ENST00000545450 LINC01356Q8N9X3 169 aa14.36□□□□□ -0.11
MSLN-202ENST00000545450 SPANXB1Q9NS25 103 aaPredicted RBP14.36□□□□□ -0.11
MSLN-202ENST00000545450 IGHV3OR16-8A0A075B7F1 116 aa14.36□□□□□ -0.11
MSLN-202ENST00000545450 RNF223E7ERA6 249 aa14.36□□□□□ -0.11
MSLN-202ENST00000545450 C12orf74Q32Q52 190 aa14.36□□□□□ -0.11
MSLN-202ENST00000545450 ZNF469Q96JG9 3925 aaPredicted RBP14.35□□□□□ -0.11
MSLN-202ENST00000545450 K7EMI3 77 aa14.35□□□□□ -0.11
MSLN-202ENST00000545450 SCGB1A1P11684 91 aa14.35□□□□□ -0.11
MSLN-202ENST00000545450 GATA3P23771 443 aa14.35□□□□□ -0.11
MSLN-202ENST00000545450 WFDC2Q14508 124 aa14.35□□□□□ -0.11
MSLN-202ENST00000545450 RNF182Q8N6D2 247 aa14.35□□□□□ -0.11
MSLN-202ENST00000545450 ZNF479Q96JC4 524 aa14.35□□□□□ -0.11
MSLN-202ENST00000545450 BUB3O43684 328 aa14.34□□□□□ -0.11
MSLN-202ENST00000545450 RAB9AP51151 201 aa14.34□□□□□ -0.11
MSLN-202ENST00000545450 Q5PR19 223 aa14.34□□□□□ -0.11
MSLN-202ENST00000545450 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.34□□□□□ -0.11
MSLN-202ENST00000545450 LRRC75A-AS1Q8N1F1 130 aa14.34□□□□□ -0.11
MSLN-202ENST00000545450 IGHV3-35A0A0C4DH35 117 aa14.34□□□□□ -0.11
MSLN-202ENST00000545450 IGHV7-4-1A0A0J9YVY3 117 aa14.34□□□□□ -0.11
MSLN-202ENST00000545450 C5orf56Q8N8D9 126 aa14.34□□□□□ -0.11
MSLN-202ENST00000545450 SIGMAR1Q99720 223 aa14.34□□□□□ -0.11
MSLN-202ENST00000545450 AGPAT4-IT1Q9H0P7 198 aa14.34□□□□□ -0.11
MSLN-202ENST00000545450 AZU1P20160 251 aa14.33□□□□□ -0.11
MSLN-202ENST00000545450 PLNP26678 52 aa14.33□□□□□ -0.11
MSLN-202ENST00000545450 SLC50A1Q9BRV3 221 aa14.33□□□□□ -0.11
MSLN-202ENST00000545450 ZFAND3Q9H8U3 227 aa14.33□□□□□ -0.11
MSLN-202ENST00000545450 IGHV4-4A0A075B6R2 117 aa14.33□□□□□ -0.12
MSLN-202ENST00000545450 CD300EQ496F6 205 aaPredicted RBP14.33□□□□□ -0.12
MSLN-202ENST00000545450 LINC01548A6NM66 108 aa14.32□□□□□ -0.12
MSLN-202ENST00000545450 ATP6V0E1O15342 81 aa14.32□□□□□ -0.12
MSLN-202ENST00000545450 ZNF502Q8TBZ5 544 aa14.32□□□□□ -0.12
MSLN-202ENST00000545450 TRAV26-2A0A0B4J265 109 aa14.32□□□□□ -0.12
MSLN-202ENST00000545450 LINC01619G3V211 115 aa14.32□□□□□ -0.12
MSLN-202ENST00000545450 TGFAP01135 160 aa14.32□□□□□ -0.12
MSLN-202ENST00000545450 KRTAP1-3Q8IUG1 177 aa14.32□□□□□ -0.12
MSLN-202ENST00000545450 GTSF1LQ9H1H1 148 aa14.32□□□□□ -0.12
MSLN-202ENST00000545450 MOB4Q9Y3A3 225 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms