RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-223	ENST00000545153	ZNF415	Q09FC8	603 aa		10.08	□□□□□ -0.8
PTPN6-223	ENST00000545153	TDRG1	Q3Y452	100 aa		10.08	□□□□□ -0.8
PTPN6-223	ENST00000545153	SMUG1	Q53HV7	270 aa		10.08	□□□□□ -0.8
PTPN6-223	ENST00000545153	TRGV11	A0A075B6L2	103 aa		10.07	□□□□□ -0.8
PTPN6-223	ENST00000545153	HOXA5	P20719	270 aa		10.07	□□□□□ -0.8
PTPN6-223	ENST00000545153	MRPL16	Q9NX20	251 aa	Known RBP	10.07	□□□□□ -0.8
PTPN6-223	ENST00000545153	C11orf21	Q9P2W6	132 aa		10.07	□□□□□ -0.8
PTPN6-223	ENST00000545153	ARL2-SNX15	V9GYD0	113 aa		10.07	□□□□□ -0.8
PTPN6-223	ENST00000545153	KMT2A	Q03164	3969 aa		10.06	□□□□□ -0.8
PTPN6-223	ENST00000545153		P0DMU3	169 aa		10.06	□□□□□ -0.8
PTPN6-223	ENST00000545153	FAM231A	P0DMU4	169 aa		10.06	□□□□□ -0.8
PTPN6-223	ENST00000545153	FAM231C	P0DMU5	169 aa		10.06	□□□□□ -0.8
PTPN6-223	ENST00000545153	SULT1A2	P50226	295 aa		10.06	□□□□□ -0.8
PTPN6-223	ENST00000545153	LGALS9B	Q3B8N2	356 aa		10.06	□□□□□ -0.8
PTPN6-223	ENST00000545153	KCNS1	Q96KK3	526 aa		10.06	□□□□□ -0.8
PTPN6-223	ENST00000545153	SDF2L1	Q9HCN8	221 aa		10.06	□□□□□ -0.8
PTPN6-223	ENST00000545153	TRAV26-1	A0A087WT03	109 aa		10.05	□□□□□ -0.8
PTPN6-223	ENST00000545153	IGHV3-16	A0A0C4DH30	117 aa		10.05	□□□□□ -0.8
PTPN6-223	ENST00000545153	NUDT3	O95989	172 aa		10.05	□□□□□ -0.8
PTPN6-223	ENST00000545153	TYMS	P04818	313 aa		10.05	□□□□□ -0.8
PTPN6-223	ENST00000545153	PFN1	P07737	140 aa	Known RBP	10.05	□□□□□ -0.8
PTPN6-223	ENST00000545153	UBE2G1	P62253	170 aa		10.05	□□□□□ -0.8
PTPN6-223	ENST00000545153	C15orf53	Q8NAA6	179 aa		10.05	□□□□□ -0.8
PTPN6-223	ENST00000545153	C18orf15	Q96N68	181 aa		10.05	□□□□□ -0.8
PTPN6-223	ENST00000545153	TCEAL7	Q9BRU2	100 aa		10.05	□□□□□ -0.8
PTPN6-223	ENST00000545153	SPX	Q9BT56	116 aa		10.05	□□□□□ -0.8
PTPN6-223	ENST00000545153	TRAV1-1	A0A0B4J248	108 aa		10.04	□□□□□ -0.8
PTPN6-223	ENST00000545153		A0A0J9YY99	117 aa		10.04	□□□□□ -0.8
PTPN6-223	ENST00000545153	FABP5P3	A8MUU1	101 aa		10.04	□□□□□ -0.8
PTPN6-223	ENST00000545153	IGHV3-53	P01767	116 aa		10.04	□□□□□ -0.8
PTPN6-223	ENST00000545153		Q86TA4	180 aa		10.04	□□□□□ -0.8
PTPN6-223	ENST00000545153	POM121L12	Q8N7R1	296 aa		10.04	□□□□□ -0.8
PTPN6-223	ENST00000545153	FMC1	Q96HJ9	113 aa		10.04	□□□□□ -0.8
PTPN6-223	ENST00000545153	GNG13	Q9P2W3	67 aa		10.04	□□□□□ -0.8
PTPN6-223	ENST00000545153	ZFP30	Q9Y2G7	519 aa		10.04	□□□□□ -0.8
PTPN6-223	ENST00000545153	DNAH10	Q8IVF4	4471 aa		10.03	□□□□□ -0.8
PTPN6-223	ENST00000545153	TEX46	H3BTG2	121 aa		10.03	□□□□□ -0.8
PTPN6-223	ENST00000545153	AKR1C3	P42330	323 aa		10.03	□□□□□ -0.8
PTPN6-223	ENST00000545153	CRIP1	P50238	77 aa		10.03	□□□□□ -0.8
PTPN6-223	ENST00000545153	NKX2-5	P52952	324 aa	Predicted RBP	10.03	□□□□□ -0.8
PTPN6-223	ENST00000545153	UBE2DNL	Q8IWF7	75 aa		10.03	□□□□□ -0.8
PTPN6-223	ENST00000545153	TRBV6-1	A0A0K0K1D8	114 aa		10.02	□□□□□ -0.81
PTPN6-223	ENST00000545153	SCO2	A0A1W2PP80	73 aa		10.02	□□□□□ -0.81
PTPN6-223	ENST00000545153	RASL10A	Q92737	203 aa		10.02	□□□□□ -0.81
PTPN6-223	ENST00000545153	ZC2HC1A	Q96GY0	325 aa		10.02	□□□□□ -0.81
PTPN6-223	ENST00000545153	BOLA1	Q9Y3E2	137 aa		10.02	□□□□□ -0.81
PTPN6-223	ENST00000545153	DNAH2	Q9P225	4427 aa		10.01	□□□□□ -0.81
PTPN6-223	ENST00000545153	IGKV3D-20	A0A0C4DH25	116 aa		10.01	□□□□□ -0.81
PTPN6-223	ENST00000545153		M0R2P5	195 aa		10.01	□□□□□ -0.81
PTPN6-223	ENST00000545153	S100A9	P06702	114 aa	Known RBP	10.01	□□□□□ -0.81
PTPN6-223	ENST00000545153	RNF212	Q495C1	297 aa		10.01	□□□□□ -0.81
PTPN6-223	ENST00000545153	COX8C	Q7Z4L0	72 aa		10.01	□□□□□ -0.81
PTPN6-223	ENST00000545153	MANBAL	Q9NQG1	85 aa		10.01	□□□□□ -0.81
PTPN6-223	ENST00000545153	LTA	P01374	205 aa		10	□□□□□ -0.81
PTPN6-223	ENST00000545153	ORM1	P02763	201 aa		10	□□□□□ -0.81
PTPN6-223	ENST00000545153	FHL2	Q14192	279 aa		10	□□□□□ -0.81
PTPN6-223	ENST00000545153	ALKAL2	Q6UX46	152 aa		10	□□□□□ -0.81
PTPN6-223	ENST00000545153	NHLRC2	Q8NBF2	726 aa		10	□□□□□ -0.81
PTPN6-223	ENST00000545153	VSIG2	Q96IQ7	327 aa		10	□□□□□ -0.81
PTPN6-223	ENST00000545153	EPPK1	P58107	5090 aa	Known RBP	10	□□□□□ -0.81
PTPN6-223	ENST00000545153		C9JCJ5	164 aa		9.99	□□□□□ -0.81
PTPN6-223	ENST00000545153	SH2D1A	O60880	128 aa		9.99	□□□□□ -0.81
PTPN6-223	ENST00000545153	SFTA3	P0C7M3	94 aa		9.99	□□□□□ -0.81
PTPN6-223	ENST00000545153	FAM162B	Q5T6X4	162 aa		9.99	□□□□□ -0.81
PTPN6-223	ENST00000545153	BAGE2	Q86Y30	109 aa		9.99	□□□□□ -0.81
PTPN6-223	ENST00000545153	ZNF479	Q96JC4	524 aa		9.99	□□□□□ -0.81
PTPN6-223	ENST00000545153	HHLA3	Q9XRX5	114 aa		9.99	□□□□□ -0.81
PTPN6-223	ENST00000545153	DNAH6	Q9C0G6	4158 aa		9.98	□□□□□ -0.81
PTPN6-223	ENST00000545153	TRGV4	A0A0C4DH28	118 aa		9.98	□□□□□ -0.81
PTPN6-223	ENST00000545153		B4DEV8	164 aa		9.98	□□□□□ -0.81
PTPN6-223	ENST00000545153	KRBOX1	C9JBD0	128 aa		9.98	□□□□□ -0.81
PTPN6-223	ENST00000545153		H3BNG1	76 aa		9.98	□□□□□ -0.81
PTPN6-223	ENST00000545153		M0R036	132 aa		9.98	□□□□□ -0.81
PTPN6-223	ENST00000545153	PAX4	O43316	350 aa		9.98	□□□□□ -0.81
PTPN6-223	ENST00000545153	ZNF674	Q2M3X9	581 aa		9.98	□□□□□ -0.81
PTPN6-223	ENST00000545153	ZNF876P	Q49A33	203 aa		9.98	□□□□□ -0.81
PTPN6-223	ENST00000545153	OR4C5	Q8NGB2	326 aa		9.98	□□□□□ -0.81
PTPN6-223	ENST00000545153	IGLV2-18	A0A075B6J9	118 aa		9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	GRIFIN	A4D1Z8	144 aa		9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153		M0R2N4	97 aa		9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	IFNA1	P01562	189 aa		9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	RNASE3	P12724	160 aa	Known RBP	9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	S100A4	P26447	101 aa	Known RBP	9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	RPL35	P42766	123 aa	Known RBP	9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	CRYBA4	P53673	196 aa		9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	CCL18	P55774	89 aa		9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	SLA	Q13239	276 aa		9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	C9orf85	Q96MD7	179 aa		9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	TXNDC17	Q9BRA2	123 aa		9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	MLST8	Q9BVC4	326 aa		9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	PRO0255	Q9UI72	69 aa		9.97	□□□□□ -0.81
PTPN6-223	ENST00000545153	TMSB15B	A0A087X1C1	80 aa		9.96	□□□□□ -0.82
PTPN6-223	ENST00000545153	TRAV4	A0A0B4J268	109 aa		9.96	□□□□□ -0.82
PTPN6-223	ENST00000545153	PGPEP1L	A6NFU8	196 aa		9.96	□□□□□ -0.82
PTPN6-223	ENST00000545153	ASIP	P42127	132 aa		9.96	□□□□□ -0.82
PTPN6-223	ENST00000545153	BLOC1S1	P78537	153 aa		9.96	□□□□□ -0.82
PTPN6-223	ENST00000545153	ESRG	Q1W209	222 aa		9.96	□□□□□ -0.82
PTPN6-223	ENST00000545153	ZNF575	Q86XF7	245 aa		9.96	□□□□□ -0.82
PTPN6-223	ENST00000545153	C11orf52	Q96A22	123 aa		9.96	□□□□□ -0.82
PTPN6-223	ENST00000545153	DERL1	Q9BUN8	251 aa		9.96	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms