RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 Q5VSD8 79 aa9.53□□□□□ -0.88
DDX11-228ENST00000545115 PQLC2Q6ZP29 291 aa9.53□□□□□ -0.88
DDX11-228ENST00000545115 GOLT1AQ6ZVE7 132 aa9.53□□□□□ -0.88
DDX11-228ENST00000545115 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
DDX11-228ENST00000545115 SMIM3Q9BZL3 60 aa9.53□□□□□ -0.88
DDX11-228ENST00000545115 SDF2L1Q9HCN8 221 aa9.53□□□□□ -0.88
DDX11-228ENST00000545115 MBD2Q9UBB5 411 aa9.53□□□□□ -0.88
DDX11-228ENST00000545115 LOC100131303A0A0U1RQF7 123 aa9.52□□□□□ -0.89
DDX11-228ENST00000545115 F6UZH7 168 aa9.52□□□□□ -0.89
DDX11-228ENST00000545115 EIF3GO75821 320 aaKnown RBP eCLIP9.52□□□□□ -0.89
DDX11-228ENST00000545115 TYMSP04818 313 aa9.52□□□□□ -0.89
DDX11-228ENST00000545115 GATA1P15976 413 aaPredicted RBP9.52□□□□□ -0.89
DDX11-228ENST00000545115 GCSHP23434 173 aa9.52□□□□□ -0.89
DDX11-228ENST00000545115 PPT1P50897 306 aa9.52□□□□□ -0.89
DDX11-228ENST00000545115 TIRAPP58753 221 aa9.52□□□□□ -0.89
DDX11-228ENST00000545115 ACOT6Q3I5F7 207 aaPredicted RBP9.52□□□□□ -0.89
DDX11-228ENST00000545115 NHLRC2Q8NBF2 726 aa9.52□□□□□ -0.89
DDX11-228ENST00000545115 KCNS1Q96KK3 526 aa9.52□□□□□ -0.89
DDX11-228ENST00000545115 TREM1Q9NP99 234 aa9.52□□□□□ -0.89
DDX11-228ENST00000545115 TRAV8-1A0A0A6YYK1 113 aa9.51□□□□□ -0.89
DDX11-228ENST00000545115 IGHV3-38A0A0C4DH36 116 aa9.51□□□□□ -0.89
DDX11-228ENST00000545115 A0A1W2PPV4 95 aa9.51□□□□□ -0.89
DDX11-228ENST00000545115 SSNA1O43805 119 aa9.51□□□□□ -0.89
DDX11-228ENST00000545115 MARVELD1Q9BSK0 173 aa9.51□□□□□ -0.89
DDX11-228ENST00000545115 FAT1Q14517 4588 aa9.51□□□□□ -0.89
DDX11-228ENST00000545115 FBLL1A6NHQ2 334 aaKnown RBP9.5□□□□□ -0.89
DDX11-228ENST00000545115 PSCAO43653 123 aa9.5□□□□□ -0.89
DDX11-228ENST00000545115 IFITM3Q01628 133 aa9.5□□□□□ -0.89
DDX11-228ENST00000545115 LINC01556Q5JQF7 62 aa9.5□□□□□ -0.89
DDX11-228ENST00000545115 ASB13Q8WXK3 278 aa9.5□□□□□ -0.89
DDX11-228ENST00000545115 TVP23CQ96ET8 276 aa9.5□□□□□ -0.89
DDX11-228ENST00000545115 NDFIP1Q9BT67 221 aa9.5□□□□□ -0.89
DDX11-228ENST00000545115 BOLA1Q9Y3E2 137 aa9.5□□□□□ -0.89
DDX11-228ENST00000545115 HERC1Q15751 4861 aa9.49□□□□□ -0.89
DDX11-228ENST00000545115 PFN1P07737 140 aaKnown RBP9.49□□□□□ -0.89
DDX11-228ENST00000545115 RAB2AP61019 212 aa9.49□□□□□ -0.89
DDX11-228ENST00000545115 GNG5P63218 68 aa9.49□□□□□ -0.89
DDX11-228ENST00000545115 NTN5Q8WTR8 489 aaPredicted RBP9.49□□□□□ -0.89
DDX11-228ENST00000545115 WFDC1Q9HC57 220 aa9.49□□□□□ -0.89
DDX11-228ENST00000545115 IGLV5-52A0A0A0MRZ9 124 aa9.48□□□□□ -0.89
DDX11-228ENST00000545115 TRAV8-6A0A0B4J262 113 aa9.48□□□□□ -0.89
DDX11-228ENST00000545115 SERTM2A0A1B0GWG4 89 aa9.48□□□□□ -0.89
DDX11-228ENST00000545115 CIDEAO60543 219 aa9.48□□□□□ -0.89
DDX11-228ENST00000545115 RHOHQ15669 191 aa9.48□□□□□ -0.89
DDX11-228ENST00000545115 ZNF876PQ49A33 203 aa9.48□□□□□ -0.89
DDX11-228ENST00000545115 SLC25A29Q8N8R3 303 aa9.48□□□□□ -0.89
DDX11-228ENST00000545115 OR10G9Q8NGN4 311 aa9.48□□□□□ -0.89
DDX11-228ENST00000545115 OR10G7Q8NGN6 311 aa9.48□□□□□ -0.89
DDX11-228ENST00000545115 PRADC1Q9BSG0 188 aa9.48□□□□□ -0.89
DDX11-228ENST00000545115 TRBV6-4A0A1B0GX49 114 aa9.47□□□□□ -0.89
DDX11-228ENST00000545115 LRCOL1A6NCL2 159 aa9.47□□□□□ -0.89
DDX11-228ENST00000545115 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
DDX11-228ENST00000545115 HMGB3O15347 200 aaKnown RBP9.47□□□□□ -0.89
DDX11-228ENST00000545115 SMR3BP02814 79 aaPredicted RBP9.47□□□□□ -0.89
DDX11-228ENST00000545115 OR10J3Q5JRS4 329 aa9.47□□□□□ -0.89
DDX11-228ENST00000545115 CFAP126Q5VTH2 177 aa9.47□□□□□ -0.89
DDX11-228ENST00000545115 SGK494Q96LW2 274 aa9.47□□□□□ -0.89
DDX11-228ENST00000545115 DMBT1Q9UGM3 2413 aaPredicted RBP9.46□□□□□ -0.89
DDX11-228ENST00000545115 K7EQM0 130 aa9.46□□□□□ -0.9
DDX11-228ENST00000545115 RS1O15537 224 aa9.46□□□□□ -0.9
DDX11-228ENST00000545115 ARL14EPLP0DKL9 152 aa9.46□□□□□ -0.9
DDX11-228ENST00000545115 CDC34P49427 236 aaPredicted RBP9.46□□□□□ -0.9
DDX11-228ENST00000545115 DEFA1P59665 94 aa9.46□□□□□ -0.9
DDX11-228ENST00000545115 DEFA3P59666 94 aa9.46□□□□□ -0.9
DDX11-228ENST00000545115 C5orf17Q8NAS9 161 aa9.46□□□□□ -0.9
DDX11-228ENST00000545115 TMEM70Q9BUB7 260 aa9.46□□□□□ -0.9
DDX11-228ENST00000545115 Q9HAA7 133 aa9.46□□□□□ -0.9
DDX11-228ENST00000545115 FAM229AH3BQW9 127 aa9.45□□□□□ -0.9
DDX11-228ENST00000545115 TAAR5O14804 337 aa9.45□□□□□ -0.9
DDX11-228ENST00000545115 TCRAP04437 139 aa9.45□□□□□ -0.9
DDX11-228ENST00000545115 STAG3L2P0CL84 134 aa9.45□□□□□ -0.9
DDX11-228ENST00000545115 STAG3L3P0CL85 134 aa9.45□□□□□ -0.9
DDX11-228ENST00000545115 ZNF80P51504 273 aaPredicted RBP9.45□□□□□ -0.9
DDX11-228ENST00000545115 LELP1Q5T871 98 aa9.45□□□□□ -0.9
DDX11-228ENST00000545115 DPPA3Q6W0C5 159 aa9.45□□□□□ -0.9
DDX11-228ENST00000545115 Q8N814 137 aa9.45□□□□□ -0.9
DDX11-228ENST00000545115 C9orf85Q96MD7 179 aa9.45□□□□□ -0.9
DDX11-228ENST00000545115 C11orf21Q9P2W6 132 aa9.45□□□□□ -0.9
DDX11-228ENST00000545115 IGHV3-73A0A0B4J1V6 119 aa9.44□□□□□ -0.9
DDX11-228ENST00000545115 GCGP01275 180 aa9.44□□□□□ -0.9
DDX11-228ENST00000545115 MGST1P10620 155 aaKnown RBP9.44□□□□□ -0.9
DDX11-228ENST00000545115 HAMPP81172 84 aa9.44□□□□□ -0.9
DDX11-228ENST00000545115 ZFP69Q49AA0 526 aa9.44□□□□□ -0.9
DDX11-228ENST00000545115 OR2G3Q8NGZ4 309 aa9.44□□□□□ -0.9
DDX11-228ENST00000545115 GTSF1LQ9H1H1 148 aa9.44□□□□□ -0.9
DDX11-228ENST00000545115 IGHV3-30P01768 117 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 IGHV3-33P01772 117 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 IGHV3-30-3P0DP02 117 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 IGHV3-30-5P0DP03 117 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 GCHFRP30047 84 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 FLI1Q01543 452 aaPredicted RBP9.43□□□□□ -0.9
DDX11-228ENST00000545115 LAGE3Q14657 143 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 SMUG1Q53HV7 270 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 ZNF506Q5JVG8 444 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 Q6ZSN1 163 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 TMEM75Q8N9X5 138 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 HSD17B11Q8NBQ5 300 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 SUN5Q8TC36 379 aa9.43□□□□□ -0.9
DDX11-228ENST00000545115 RAB24Q969Q5 203 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms