RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TCTE3Q8IZS6 198 aa10.99□□□□□ -0.65
CCDC78-216ENST00000544996 FAM213BQ8TBF2 198 aa10.99□□□□□ -0.65
CCDC78-216ENST00000544996 SFT2D1Q8WV19 159 aa10.99□□□□□ -0.65
CCDC78-216ENST00000544996 C8orf49Q96NF6 230 aa10.99□□□□□ -0.65
CCDC78-216ENST00000544996 VPS13DQ5THJ4 4388 aa10.98□□□□□ -0.65
CCDC78-216ENST00000544996 PEX7O00628 323 aa10.98□□□□□ -0.65
CCDC78-216ENST00000544996 GNRH2O43555 120 aa10.98□□□□□ -0.65
CCDC78-216ENST00000544996 PFN1P07737 140 aaKnown RBP10.98□□□□□ -0.65
CCDC78-216ENST00000544996 CST9LP1Q5W188 147 aa10.98□□□□□ -0.65
CCDC78-216ENST00000544996 Q6ZNX1 250 aa10.98□□□□□ -0.65
CCDC78-216ENST00000544996 LINC00479Q96M42 142 aa10.98□□□□□ -0.65
CCDC78-216ENST00000544996 KMT2AQ03164 3969 aa10.97□□□□□ -0.65
CCDC78-216ENST00000544996 TRAV34A0A0B4J273 112 aa10.97□□□□□ -0.65
CCDC78-216ENST00000544996 IGHV3-16A0A0C4DH30 117 aa10.97□□□□□ -0.65
CCDC78-216ENST00000544996 M0R2N4 97 aa10.97□□□□□ -0.65
CCDC78-216ENST00000544996 SLAQ13239 276 aa10.97□□□□□ -0.65
CCDC78-216ENST00000544996 EIF5AL1Q6IS14 154 aaKnown RBP10.97□□□□□ -0.65
CCDC78-216ENST00000544996 MBD3L1Q8WWY6 194 aa10.97□□□□□ -0.65
CCDC78-216ENST00000544996 RASL10AQ92737 203 aa10.97□□□□□ -0.65
CCDC78-216ENST00000544996 TCEAL7Q9BRU2 100 aa10.97□□□□□ -0.65
CCDC78-216ENST00000544996 ARL2-SNX15V9GYD0 113 aa10.97□□□□□ -0.65
CCDC78-216ENST00000544996 IGLV2-18A0A075B6J9 118 aa10.96□□□□□ -0.65
CCDC78-216ENST00000544996 IGHV3-53P01767 116 aa10.96□□□□□ -0.65
CCDC78-216ENST00000544996 TYMSP04818 313 aa10.96□□□□□ -0.65
CCDC78-216ENST00000544996 H2AFB1P0C5Y9 115 aa10.96□□□□□ -0.65
CCDC78-216ENST00000544996 ZNF80P51504 273 aaPredicted RBP10.96□□□□□ -0.65
CCDC78-216ENST00000544996 M0R2P5 195 aa10.95□□□□□ -0.66
CCDC78-216ENST00000544996 PAX4O43316 350 aa10.95□□□□□ -0.66
CCDC78-216ENST00000544996 LGALSLQ3ZCW2 172 aaPredicted RBP10.95□□□□□ -0.66
CCDC78-216ENST00000544996 VSIG2Q96IQ7 327 aa10.95□□□□□ -0.66
CCDC78-216ENST00000544996 PRO0255Q9UI72 69 aa10.95□□□□□ -0.66
CCDC78-216ENST00000544996 HHLA3Q9XRX5 114 aa10.95□□□□□ -0.66
CCDC78-216ENST00000544996 TRGV4A0A0C4DH28 118 aa10.94□□□□□ -0.66
CCDC78-216ENST00000544996 PAGE4O60829 102 aa10.94□□□□□ -0.66
CCDC78-216ENST00000544996 C1QBP02746 253 aa10.94□□□□□ -0.66
CCDC78-216ENST00000544996 UBE2G1P62253 170 aa10.94□□□□□ -0.66
CCDC78-216ENST00000544996 Q86TA4 180 aa10.94□□□□□ -0.66
CCDC78-216ENST00000544996 FMC1Q96HJ9 113 aa10.94□□□□□ -0.66
CCDC78-216ENST00000544996 ZFP30Q9Y2G7 519 aa10.94□□□□□ -0.66
CCDC78-216ENST00000544996 LINC00588Q9Y4M8 146 aa10.94□□□□□ -0.66
CCDC78-216ENST00000544996 A0A1B0GV50 99 aa10.93□□□□□ -0.66
CCDC78-216ENST00000544996 FABP5P3A8MUU1 101 aa10.93□□□□□ -0.66
CCDC78-216ENST00000544996 RAB5CP51148 216 aa10.93□□□□□ -0.66
CCDC78-216ENST00000544996 FHL2Q14192 279 aa10.93□□□□□ -0.66
CCDC78-216ENST00000544996 LINC00336Q6ZUF6 198 aa10.93□□□□□ -0.66
CCDC78-216ENST00000544996 AKAP14Q86UN6 197 aa10.93□□□□□ -0.66
CCDC78-216ENST00000544996 TRAV4A0A0B4J268 109 aa10.92□□□□□ -0.66
CCDC78-216ENST00000544996 CRYBA4P53673 196 aa10.92□□□□□ -0.66
CCDC78-216ENST00000544996 SOHLH1Q5JUK2 328 aa10.92□□□□□ -0.66
CCDC78-216ENST00000544996 Q6ZR54 194 aa10.92□□□□□ -0.66
CCDC78-216ENST00000544996 OR4C5Q8NGB2 326 aa10.92□□□□□ -0.66
CCDC78-216ENST00000544996 ZNRF2Q8NHG8 242 aa10.92□□□□□ -0.66
CCDC78-216ENST00000544996 C11orf21Q9P2W6 132 aa10.92□□□□□ -0.66
CCDC78-216ENST00000544996 ICOSQ9Y6W8 199 aa10.92□□□□□ -0.66
CCDC78-216ENST00000544996 hCG_2014768A0A024R1R8 64 aa10.91□□□□□ -0.66
CCDC78-216ENST00000544996 A0A096LPF7 62 aa10.91□□□□□ -0.66
CCDC78-216ENST00000544996 TEX46H3BTG2 121 aa10.91□□□□□ -0.66
CCDC78-216ENST00000544996 SFTA3P0C7M3 94 aa10.91□□□□□ -0.66
CCDC78-216ENST00000544996 AKR1C3P42330 323 aa10.91□□□□□ -0.66
CCDC78-216ENST00000544996 ESRGQ1W209 222 aa10.91□□□□□ -0.66
CCDC78-216ENST00000544996 ZNF876PQ49A33 203 aa10.91□□□□□ -0.66
CCDC78-216ENST00000544996 ZNF479Q96JC4 524 aa10.91□□□□□ -0.66
CCDC78-216ENST00000544996 TRBV6-1A0A0K0K1D8 114 aa10.9□□□□□ -0.66
CCDC78-216ENST00000544996 C9JCJ5 164 aa10.9□□□□□ -0.66
CCDC78-216ENST00000544996 S100A9P06702 114 aaKnown RBP10.9□□□□□ -0.66
CCDC78-216ENST00000544996 MRPL23Q16540 153 aaKnown RBP10.9□□□□□ -0.66
CCDC78-216ENST00000544996 SLC51BQ86UW2 128 aa10.9□□□□□ -0.66
CCDC78-216ENST00000544996 PCNPQ8WW12 178 aaKnown RBP10.9□□□□□ -0.66
CCDC78-216ENST00000544996 Q9H8V8 135 aa10.9□□□□□ -0.66
CCDC78-216ENST00000544996 NBDYA0A0U1RRE5 68 aa10.89□□□□□ -0.67
CCDC78-216ENST00000544996 LTAP01374 205 aa10.89□□□□□ -0.67
CCDC78-216ENST00000544996 ORM1P02763 201 aa10.89□□□□□ -0.67
CCDC78-216ENST00000544996 S100A4P26447 101 aaKnown RBP10.89□□□□□ -0.67
CCDC78-216ENST00000544996 FAM162BQ5T6X4 162 aa10.89□□□□□ -0.67
CCDC78-216ENST00000544996 C1orf134Q5TEV5 83 aa10.89□□□□□ -0.67
CCDC78-216ENST00000544996 COX8CQ7Z4L0 72 aa10.89□□□□□ -0.67
CCDC78-216ENST00000544996 ZC2HC1AQ96GY0 325 aa10.89□□□□□ -0.67
CCDC78-216ENST00000544996 C9orf85Q96MD7 179 aa10.89□□□□□ -0.67
CCDC78-216ENST00000544996 MRPS16Q9Y3D3 137 aaKnown RBP10.89□□□□□ -0.67
CCDC78-216ENST00000544996 EPPK1P58107 5090 aaKnown RBP10.88□□□□□ -0.67
CCDC78-216ENST00000544996 TRAV1-1A0A0B4J248 108 aa10.88□□□□□ -0.67
CCDC78-216ENST00000544996 IGKV3D-20A0A0C4DH25 116 aa10.88□□□□□ -0.67
CCDC78-216ENST00000544996 ASIPP42127 132 aa10.88□□□□□ -0.67
CCDC78-216ENST00000544996 UPK3BQ9BT76 320 aa10.88□□□□□ -0.67
CCDC78-216ENST00000544996 MANBALQ9NQG1 85 aa10.88□□□□□ -0.67
CCDC78-216ENST00000544996 B4DEV8 164 aa10.87□□□□□ -0.67
CCDC78-216ENST00000544996 CIDEAO60543 219 aa10.87□□□□□ -0.67
CCDC78-216ENST00000544996 RNASE3P12724 160 aaKnown RBP10.87□□□□□ -0.67
CCDC78-216ENST00000544996 SRIP30626 198 aa10.87□□□□□ -0.67
CCDC78-216ENST00000544996 SULT1A2P50226 295 aa10.87□□□□□ -0.67
CCDC78-216ENST00000544996 CRIP1P50238 77 aa10.87□□□□□ -0.67
CCDC78-216ENST00000544996 NEGR1Q7Z3B1 354 aa10.87□□□□□ -0.67
CCDC78-216ENST00000544996 PTH2Q96A98 100 aa10.87□□□□□ -0.67
CCDC78-216ENST00000544996 GNG13Q9P2W3 67 aa10.87□□□□□ -0.67
CCDC78-216ENST00000544996 DNAH6Q9C0G6 4158 aa10.86□□□□□ -0.67
CCDC78-216ENST00000544996 SCO2A0A1W2PP80 73 aa10.86□□□□□ -0.67
CCDC78-216ENST00000544996 PRSS29PA6NIE9 313 aa10.86□□□□□ -0.67
CCDC78-216ENST00000544996 RTL8CO15255 209 aa10.86□□□□□ -0.67
CCDC78-216ENST00000544996 SH2D1AO60880 128 aa10.86□□□□□ -0.67
CCDC78-216ENST00000544996 ZNF674Q2M3X9 581 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms