RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 BCL2L11O43521 198 aa8.24□□□□□ -1.09
HDAC4-216ENST00000544989 PFN1P07737 140 aaKnown RBP8.24□□□□□ -1.09
HDAC4-216ENST00000544989 HOXA5P20719 270 aa8.24□□□□□ -1.09
HDAC4-216ENST00000544989 FHITP49789 147 aa8.24□□□□□ -1.09
HDAC4-216ENST00000544989 ZNF726P1Q15940 193 aa8.24□□□□□ -1.09
HDAC4-216ENST00000544989 DPPA3Q6W0C5 159 aa8.24□□□□□ -1.09
HDAC4-216ENST00000544989 Q6ZR54 194 aa8.24□□□□□ -1.09
HDAC4-216ENST00000544989 SSX7Q7RTT5 188 aa8.24□□□□□ -1.09
HDAC4-216ENST00000544989 MAP1LC3BQ9GZQ8 125 aa8.24□□□□□ -1.09
HDAC4-216ENST00000544989 PRO0255Q9UI72 69 aa8.24□□□□□ -1.09
HDAC4-216ENST00000544989 A0A0J9YY99 117 aa8.23□□□□□ -1.09
HDAC4-216ENST00000544989 SMLR1H3BR10 107 aa8.23□□□□□ -1.09
HDAC4-216ENST00000544989 M0R2P5 195 aa8.23□□□□□ -1.09
HDAC4-216ENST00000544989 PAX4O43316 350 aa8.23□□□□□ -1.09
HDAC4-216ENST00000544989 Q6ZQT7 251 aa8.23□□□□□ -1.09
HDAC4-216ENST00000544989 TVP23CQ96ET8 276 aa8.23□□□□□ -1.09
HDAC4-216ENST00000544989 ZNF471Q9BX82 626 aaPredicted RBP8.23□□□□□ -1.09
HDAC4-216ENST00000544989 MRPL16Q9NX20 251 aaKnown RBP8.23□□□□□ -1.09
HDAC4-216ENST00000544989 MDFICQ9P1T7 246 aa8.23□□□□□ -1.09
HDAC4-216ENST00000544989 IGLV2-18A0A075B6J9 118 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 IGHV3-16A0A0C4DH30 117 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 FAM74A7A6NL05 159 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 M0R2N4 97 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 PEX7O00628 323 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 CIDEAO60543 219 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 PFDN1O60925 122 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 GCGP01275 180 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 IGLV2-11P01706 119 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 LGALSLQ3ZCW2 172 aaPredicted RBP8.22□□□□□ -1.09
HDAC4-216ENST00000544989 TTC32Q5I0X7 151 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 C1orf134Q5TEV5 83 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 EIF5AL1Q6IS14 154 aaKnown RBP8.22□□□□□ -1.09
HDAC4-216ENST00000544989 PRNTQ86SH4 94 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 ZNRF2Q8NHG8 242 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 UPK3BQ9BT76 320 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 HHLA3Q9XRX5 114 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 LINC00588Q9Y4M8 146 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 ICOSQ9Y6W8 199 aa8.22□□□□□ -1.09
HDAC4-216ENST00000544989 TRAV4A0A0B4J268 109 aa8.21□□□□□ -1.1
HDAC4-216ENST00000544989 TRGV4A0A0C4DH28 118 aa8.21□□□□□ -1.1
HDAC4-216ENST00000544989 ORM1P02763 201 aa8.21□□□□□ -1.1
HDAC4-216ENST00000544989 TYMSP04818 313 aa8.21□□□□□ -1.1
HDAC4-216ENST00000544989 TPT1P13693 172 aaKnown RBP8.21□□□□□ -1.1
HDAC4-216ENST00000544989 FGF8P55075 233 aaPredicted RBP8.21□□□□□ -1.1
HDAC4-216ENST00000544989 UBE2G2P60604 165 aa8.21□□□□□ -1.1
HDAC4-216ENST00000544989 MRPL23Q16540 153 aaKnown RBP8.21□□□□□ -1.1
HDAC4-216ENST00000544989 OR11H4Q8NGC9 324 aa8.21□□□□□ -1.1
HDAC4-216ENST00000544989 FMC1Q96HJ9 113 aa8.21□□□□□ -1.1
HDAC4-216ENST00000544989 SGK494Q96LW2 274 aa8.21□□□□□ -1.1
HDAC4-216ENST00000544989 ZFP30Q9Y2G7 519 aa8.21□□□□□ -1.1
HDAC4-216ENST00000544989 MRPS16Q9Y3D3 137 aaKnown RBP8.21□□□□□ -1.1
HDAC4-216ENST00000544989 NACAE9PAV3 2078 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 A0A096LPF7 62 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 NBDYA0A0U1RRE5 68 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 A0A1W2PPQ1 181 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 GNRH2O43555 120 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 IGHV3-53P01767 116 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 BTF3P20290 206 aaKnown RBP8.2□□□□□ -1.1
HDAC4-216ENST00000544989 UBE2G1P62253 170 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 SH2D6Q7Z4S9 175 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 OR4C5Q8NGB2 326 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 PCNPQ8WW12 178 aaKnown RBP8.2□□□□□ -1.1
HDAC4-216ENST00000544989 MBD3L1Q8WWY6 194 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 PTH2Q96A98 100 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 VSIG2Q96IQ7 327 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 C8orf49Q96NF6 230 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 Q9H8V8 135 aa8.2□□□□□ -1.1
HDAC4-216ENST00000544989 PRSS29PA6NIE9 313 aa8.19□□□□□ -1.1
HDAC4-216ENST00000544989 FABP5P3A8MUU1 101 aa8.19□□□□□ -1.1
HDAC4-216ENST00000544989 S100A9P06702 114 aaKnown RBP8.19□□□□□ -1.1
HDAC4-216ENST00000544989 RAB5CP51148 216 aa8.19□□□□□ -1.1
HDAC4-216ENST00000544989 CRYBA4P53673 196 aa8.19□□□□□ -1.1
HDAC4-216ENST00000544989 FHL2Q14192 279 aa8.19□□□□□ -1.1
HDAC4-216ENST00000544989 CST9LP1Q5W188 147 aa8.19□□□□□ -1.1
HDAC4-216ENST00000544989 TMUB2Q71RG4 321 aa8.19□□□□□ -1.1
HDAC4-216ENST00000544989 Q86TA4 180 aa8.19□□□□□ -1.1
HDAC4-216ENST00000544989 TCTE3Q8IZS6 198 aa8.19□□□□□ -1.1
HDAC4-216ENST00000544989 FAM213BQ8TBF2 198 aa8.19□□□□□ -1.1
HDAC4-216ENST00000544989 SFT2D1Q8WV19 159 aa8.19□□□□□ -1.1
HDAC4-216ENST00000544989 TRBV6-1A0A0K0K1D8 114 aa8.18□□□□□ -1.1
HDAC4-216ENST00000544989 C9JCJ5 164 aa8.18□□□□□ -1.1
HDAC4-216ENST00000544989 TEX46H3BTG2 121 aa8.18□□□□□ -1.1
HDAC4-216ENST00000544989 RTL8CO15255 209 aa8.18□□□□□ -1.1
HDAC4-216ENST00000544989 H2AFB1P0C5Y9 115 aa8.18□□□□□ -1.1
HDAC4-216ENST00000544989 ZNF80P51504 273 aaPredicted RBP8.18□□□□□ -1.1
HDAC4-216ENST00000544989 ESRGQ1W209 222 aa8.18□□□□□ -1.1
HDAC4-216ENST00000544989 PIK3CD-AS1Q5SR53 167 aa8.18□□□□□ -1.1
HDAC4-216ENST00000544989 NEGR1Q7Z3B1 354 aa8.18□□□□□ -1.1
HDAC4-216ENST00000544989 COX8CQ7Z4L0 72 aa8.18□□□□□ -1.1
HDAC4-216ENST00000544989 TXNDC17Q9BRA2 123 aa8.18□□□□□ -1.1
HDAC4-216ENST00000544989 PKD1P98161 4303 aa8.18□□□□□ -1.1
HDAC4-216ENST00000544989 HERC1Q15751 4861 aa8.17□□□□□ -1.1
HDAC4-216ENST00000544989 TRAV34A0A0B4J273 112 aa8.17□□□□□ -1.1
HDAC4-216ENST00000544989 S100A4P26447 101 aaKnown RBP8.17□□□□□ -1.1
HDAC4-216ENST00000544989 SRIP30626 198 aa8.17□□□□□ -1.1
HDAC4-216ENST00000544989 AKR1C3P42330 323 aa8.17□□□□□ -1.1
HDAC4-216ENST00000544989 ZNF876PQ49A33 203 aa8.17□□□□□ -1.1
HDAC4-216ENST00000544989 FAM162BQ5T6X4 162 aa8.17□□□□□ -1.1
HDAC4-216ENST00000544989 C6orf223Q8N319 242 aa8.17□□□□□ -1.1
HDAC4-216ENST00000544989 ZNF479Q96JC4 524 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms