RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 SMIM2Q9BVW6 85 aa9.45□□□□□ -0.9
PAAF1-215ENST00000544909 HHLA3Q9XRX5 114 aa9.45□□□□□ -0.9
PAAF1-215ENST00000544909 IGHV3OR16-13A0A075B7E8 117 aa9.45□□□□□ -0.9
PAAF1-215ENST00000544909 IGHV3-74A0A0B4J1X5 117 aa9.45□□□□□ -0.9
PAAF1-215ENST00000544909 ADAMTSL5Q6ZMM2 481 aa9.45□□□□□ -0.9
PAAF1-215ENST00000544909 TMEM158Q8WZ71 300 aa9.45□□□□□ -0.9
PAAF1-215ENST00000544909 C20orf173Q96LM9 149 aa9.45□□□□□ -0.9
PAAF1-215ENST00000544909 AP1S3Q96PC3 154 aa9.45□□□□□ -0.9
PAAF1-215ENST00000544909 UFC1Q9Y3C8 167 aa9.45□□□□□ -0.9
PAAF1-215ENST00000544909 NCOR2Q9Y618 2525 aa9.44□□□□□ -0.9
PAAF1-215ENST00000544909 IGHV4-30-2A0A087WSY4 118 aa9.44□□□□□ -0.9
PAAF1-215ENST00000544909 IGHV3-49A0A0A0MS15 119 aa9.44□□□□□ -0.9
PAAF1-215ENST00000544909 KLLNB2CW77 178 aa9.44□□□□□ -0.9
PAAF1-215ENST00000544909 H3BRM9 83 aa9.44□□□□□ -0.9
PAAF1-215ENST00000544909 PRB4P10163 310 aaPredicted RBP9.44□□□□□ -0.9
PAAF1-215ENST00000544909 PF4V1P10720 104 aa9.44□□□□□ -0.9
PAAF1-215ENST00000544909 VAMP3Q15836 100 aa9.44□□□□□ -0.9
PAAF1-215ENST00000544909 OR4C5Q8NGB2 326 aa9.44□□□□□ -0.9
PAAF1-215ENST00000544909 RHPN1-AS1Q9BWJ2 59 aa9.44□□□□□ -0.9
PAAF1-215ENST00000544909 CBY1Q9Y3M2 126 aa9.44□□□□□ -0.9
PAAF1-215ENST00000544909 H3BVH4 76 aa9.43□□□□□ -0.9
PAAF1-215ENST00000544909 PRSS1P07477 247 aa9.43□□□□□ -0.9
PAAF1-215ENST00000544909 DOPEY1Q5JWR5 2465 aa9.43□□□□□ -0.9
PAAF1-215ENST00000544909 A0A087WX48 190 aa9.42□□□□□ -0.9
PAAF1-215ENST00000544909 TRBV12-3P01733 135 aa9.42□□□□□ -0.9
PAAF1-215ENST00000544909 S100A4P26447 101 aaKnown RBP9.42□□□□□ -0.9
PAAF1-215ENST00000544909 PSMB8P28062 276 aa9.42□□□□□ -0.9
PAAF1-215ENST00000544909 SUMO2P61956 95 aaKnown RBP9.42□□□□□ -0.9
PAAF1-215ENST00000544909 PRR9Q5T870 116 aa9.42□□□□□ -0.9
PAAF1-215ENST00000544909 PHLDA3Q9Y5J5 127 aa9.42□□□□□ -0.9
PAAF1-215ENST00000544909 IGHV4OR15-8A0A075B7B6 117 aa9.42□□□□□ -0.9
PAAF1-215ENST00000544909 A0A087WW49 117 aa9.42□□□□□ -0.9
PAAF1-215ENST00000544909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.42□□□□□ -0.9
PAAF1-215ENST00000544909 DKK2Q9UBU2 259 aa9.42□□□□□ -0.9
PAAF1-215ENST00000544909 CHD8Q9HCK8 2581 aa9.42□□□□□ -0.9
PAAF1-215ENST00000544909 IGHV3OR16-10A0A075B7F0 116 aa9.41□□□□□ -0.9
PAAF1-215ENST00000544909 CBY3A6NI87 242 aa9.41□□□□□ -0.9
PAAF1-215ENST00000544909 LINC01619G3V211 115 aa9.41□□□□□ -0.9
PAAF1-215ENST00000544909 GAS8-AS1O95177 125 aa9.41□□□□□ -0.9
PAAF1-215ENST00000544909 TAL2Q16559 108 aa9.41□□□□□ -0.9
PAAF1-215ENST00000544909 LINC01356Q8N9X3 169 aa9.41□□□□□ -0.9
PAAF1-215ENST00000544909 TOMM6Q96B49 74 aa9.41□□□□□ -0.9
PAAF1-215ENST00000544909 TP73-AS1Q9UF72 201 aa9.41□□□□□ -0.9
PAAF1-215ENST00000544909 LINC00527Q9UJ94 153 aa9.41□□□□□ -0.9
PAAF1-215ENST00000544909 C9orf118A6NHY6 69 aa9.4□□□□□ -0.9
PAAF1-215ENST00000544909 LY6EQ16553 131 aa9.4□□□□□ -0.9
PAAF1-215ENST00000544909 GTF2H5Q6ZYL4 71 aa9.4□□□□□ -0.9
PAAF1-215ENST00000544909 RNF152Q8N8N0 203 aa9.4□□□□□ -0.9
PAAF1-215ENST00000544909 DCANP1Q8TF63 244 aa9.4□□□□□ -0.9
PAAF1-215ENST00000544909 C18orf15Q96N68 181 aa9.4□□□□□ -0.9
PAAF1-215ENST00000544909 KLK15Q9H2R5 256 aa9.4□□□□□ -0.9
PAAF1-215ENST00000544909 CACNA1AO00555 2505 aa9.4□□□□□ -0.9
PAAF1-215ENST00000544909 F8VRH5 84 aa9.4□□□□□ -0.91
PAAF1-215ENST00000544909 GATA1P15976 413 aaPredicted RBP9.4□□□□□ -0.91
PAAF1-215ENST00000544909 NMUP48645 174 aa9.4□□□□□ -0.91
PAAF1-215ENST00000544909 BLCAPP62952 87 aa9.4□□□□□ -0.91
PAAF1-215ENST00000544909 TM4SF20Q53R12 229 aa9.4□□□□□ -0.91
PAAF1-215ENST00000544909 FOXC2Q99958 501 aa9.4□□□□□ -0.91
PAAF1-215ENST00000544909 ITPR1Q14643 2758 aa9.39□□□□□ -0.91
PAAF1-215ENST00000544909 H7C1H1 209 aa9.39□□□□□ -0.91
PAAF1-215ENST00000544909 LGALS9O00182 355 aa9.39□□□□□ -0.91
PAAF1-215ENST00000544909 ANXA2RQ3ZCQ2 193 aa9.39□□□□□ -0.91
PAAF1-215ENST00000544909 RASL10AQ92737 203 aa9.39□□□□□ -0.91
PAAF1-215ENST00000544909 PKD1L2Q7Z442 2459 aa9.39□□□□□ -0.91
PAAF1-215ENST00000544909 ELANEP08246 267 aa9.38□□□□□ -0.91
PAAF1-215ENST00000544909 RNASE3P12724 160 aaKnown RBP9.38□□□□□ -0.91
PAAF1-215ENST00000544909 FXYD7P58549 80 aa9.38□□□□□ -0.91
PAAF1-215ENST00000544909 AKAP6Q13023 2319 aa9.38□□□□□ -0.91
PAAF1-215ENST00000544909 ZC2HC1BQ5TFG8 222 aa9.38□□□□□ -0.91
PAAF1-215ENST00000544909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.38□□□□□ -0.91
PAAF1-215ENST00000544909 IGHV3-11P01762 117 aa9.38□□□□□ -0.91
PAAF1-215ENST00000544909 SNRPD3P62318 126 aaKnown RBP9.38□□□□□ -0.91
PAAF1-215ENST00000544909 RPL11P62913 178 aaKnown RBP9.38□□□□□ -0.91
PAAF1-215ENST00000544909 PCP2Q8IVA1 136 aa9.38□□□□□ -0.91
PAAF1-215ENST00000544909 TM2D2Q9BX73 214 aa9.38□□□□□ -0.91
PAAF1-215ENST00000544909 A0A096LNT2 108 aa9.37□□□□□ -0.91
PAAF1-215ENST00000544909 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
PAAF1-215ENST00000544909 FAM159AQ6UWV7 190 aa9.37□□□□□ -0.91
PAAF1-215ENST00000544909 Q6ZVH6 145 aa9.37□□□□□ -0.91
PAAF1-215ENST00000544909 OR5A1Q8NGJ0 315 aa9.37□□□□□ -0.91
PAAF1-215ENST00000544909 MRPL35Q9NZE8 188 aaKnown RBP9.37□□□□□ -0.91
PAAF1-215ENST00000544909 PIEZO1Q92508 2521 aa9.36□□□□□ -0.91
PAAF1-215ENST00000544909 TRAV26-2A0A0B4J265 109 aa9.36□□□□□ -0.91
PAAF1-215ENST00000544909 RNASE4P34096 147 aaKnown RBP9.36□□□□□ -0.91
PAAF1-215ENST00000544909 AMMECR1LQ6DCA0 310 aa9.36□□□□□ -0.91
PAAF1-215ENST00000544909 ERASQ7Z444 233 aa9.36□□□□□ -0.91
PAAF1-215ENST00000544909 KIF25-AS1Q9Y6Z4 181 aa9.36□□□□□ -0.91
PAAF1-215ENST00000544909 TRBV25-1A0A075B6N4 114 aa9.35□□□□□ -0.91
PAAF1-215ENST00000544909 TRAV8-6A0A0B4J262 113 aa9.35□□□□□ -0.91
PAAF1-215ENST00000544909 TRBV6-5A0A0K0K1A5 114 aa9.35□□□□□ -0.91
PAAF1-215ENST00000544909 UFSP1Q6NVU6 142 aa9.35□□□□□ -0.91
PAAF1-215ENST00000544909 NEXN-AS1Q8NBZ9 246 aa9.35□□□□□ -0.91
PAAF1-215ENST00000544909 CHAC1Q9BUX1 264 aa9.35□□□□□ -0.91
PAAF1-215ENST00000544909 GAGE10A6NGK3 116 aa9.35□□□□□ -0.91
PAAF1-215ENST00000544909 DUSP14O95147 198 aaKnown RBP9.35□□□□□ -0.91
PAAF1-215ENST00000544909 FSHBP01225 129 aa9.35□□□□□ -0.91
PAAF1-215ENST00000544909 CDKN1BP46527 198 aa9.35□□□□□ -0.91
PAAF1-215ENST00000544909 C14orf178Q8N769 122 aaPredicted RBP9.35□□□□□ -0.91
PAAF1-215ENST00000544909 SCGB3A1Q96QR1 104 aa9.35□□□□□ -0.91
PAAF1-215ENST00000544909 VPREB3Q9UKI3 123 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms