RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 PFN1P07737 140 aaKnown RBP7.93□□□□□ -1.14
YBX3-216ENST00000544622 TMEM183BQ1AE95 376 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 LGALSLQ3ZCW2 172 aaPredicted RBP7.93□□□□□ -1.14
YBX3-216ENST00000544622 SAPCD1Q5SSQ6 148 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 TMUB2Q71RG4 321 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 COX8CQ7Z4L0 72 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 TMEM183AQ8IXX5 376 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 ZNRF2Q8NHG8 242 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 STOML3Q8TAV4 291 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 HIST1H2BAQ96A08 127 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 SPXQ9BT56 116 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 ZNF471Q9BX82 626 aaPredicted RBP7.93□□□□□ -1.14
YBX3-216ENST00000544622 MRPL16Q9NX20 251 aaKnown RBP7.93□□□□□ -1.14
YBX3-216ENST00000544622 LINC00588Q9Y4M8 146 aa7.93□□□□□ -1.14
YBX3-216ENST00000544622 GCGP01275 180 aa7.92□□□□□ -1.14
YBX3-216ENST00000544622 UBE2G2P60604 165 aa7.92□□□□□ -1.14
YBX3-216ENST00000544622 FHL2Q14192 279 aa7.92□□□□□ -1.14
YBX3-216ENST00000544622 PRNTQ86SH4 94 aa7.92□□□□□ -1.14
YBX3-216ENST00000544622 UBE2DNLQ8IWF7 75 aa7.92□□□□□ -1.14
YBX3-216ENST00000544622 IQCF2Q8IXL9 164 aa7.92□□□□□ -1.14
YBX3-216ENST00000544622 KCNS1Q96KK3 526 aa7.92□□□□□ -1.14
YBX3-216ENST00000544622 NDFIP1Q9BT67 221 aa7.92□□□□□ -1.14
YBX3-216ENST00000544622 ARL2-SNX15V9GYD0 113 aa7.92□□□□□ -1.14
YBX3-216ENST00000544622 PKHD1P08F94 4074 aa7.91□□□□□ -1.14
YBX3-216ENST00000544622 A0A096LPF7 62 aa7.91□□□□□ -1.14
YBX3-216ENST00000544622 TRAV34A0A0B4J273 112 aa7.91□□□□□ -1.14
YBX3-216ENST00000544622 PEX7O00628 323 aa7.91□□□□□ -1.14
YBX3-216ENST00000544622 RTL8CO15255 209 aa7.91□□□□□ -1.14
YBX3-216ENST00000544622 CCL18P55774 89 aa7.91□□□□□ -1.14
YBX3-216ENST00000544622 ESRGQ1W209 222 aa7.91□□□□□ -1.14
YBX3-216ENST00000544622 SMUG1Q53HV7 270 aa7.91□□□□□ -1.14
YBX3-216ENST00000544622 DPPA3Q6W0C5 159 aa7.91□□□□□ -1.14
YBX3-216ENST00000544622 ZNF575Q86XF7 245 aa7.91□□□□□ -1.14
YBX3-216ENST00000544622 TCEAL7Q9BRU2 100 aa7.91□□□□□ -1.14
YBX3-216ENST00000544622 DYNC1H1Q14204 4646 aaKnown RBP7.91□□□□□ -1.14
YBX3-216ENST00000544622 IGLV2-18A0A075B6J9 118 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 IGKV3D-20A0A0C4DH25 116 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 TRBV6-1A0A0K0K1D8 114 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 M0R2N4 97 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 M0R2P5 195 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 IFNA7P01567 189 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 C1QBP02746 253 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 TPT1P13693 172 aaKnown RBP7.9□□□□□ -1.14
YBX3-216ENST00000544622 CRIP1P50238 77 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 CRYBA4P53673 196 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 EIF5AP63241 154 aaKnown RBP7.9□□□□□ -1.14
YBX3-216ENST00000544622 ZNF479Q96JC4 524 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 UPK3BQ9BT76 320 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 SDF2L1Q9HCN8 221 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 PRO0255Q9UI72 69 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 NAGKQ9UJ70 344 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 KIAA1109Q2LD37 5005 aa7.9□□□□□ -1.14
YBX3-216ENST00000544622 PAGE4O60829 102 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 IGHV3-53P01767 116 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 RNASE3P12724 160 aaKnown RBP7.89□□□□□ -1.15
YBX3-216ENST00000544622 SLAQ13239 276 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 ZFP69Q49AA0 526 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 LINC00336Q6ZUF6 198 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 Q86TA4 180 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 FAM213BQ8TBF2 198 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 SFT2D1Q8WV19 159 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 PTH2Q96A98 100 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 C9orf85Q96MD7 179 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 HHLA3Q9XRX5 114 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 ZFP30Q9Y2G7 519 aa7.89□□□□□ -1.15
YBX3-216ENST00000544622 TRAV4A0A0B4J268 109 aa7.88□□□□□ -1.15
YBX3-216ENST00000544622 FABP5P3A8MUU1 101 aa7.88□□□□□ -1.15
YBX3-216ENST00000544622 PAX4O43316 350 aa7.88□□□□□ -1.15
YBX3-216ENST00000544622 PFDN1O60925 122 aa7.88□□□□□ -1.15
YBX3-216ENST00000544622 LTAP01374 205 aa7.88□□□□□ -1.15
YBX3-216ENST00000544622 H2AFB1P0C5Y9 115 aa7.88□□□□□ -1.15
YBX3-216ENST00000544622 SFTA3P0C7M3 94 aa7.88□□□□□ -1.15
YBX3-216ENST00000544622 PPT1P50897 306 aa7.88□□□□□ -1.15
YBX3-216ENST00000544622 FMC1Q96HJ9 113 aa7.88□□□□□ -1.15
YBX3-216ENST00000544622 Q9H8V8 135 aa7.88□□□□□ -1.15
YBX3-216ENST00000544622 TRAV1-1A0A0B4J248 108 aa7.87□□□□□ -1.15
YBX3-216ENST00000544622 NBDYA0A0U1RRE5 68 aa7.87□□□□□ -1.15
YBX3-216ENST00000544622 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
YBX3-216ENST00000544622 RAB5CP51148 216 aa7.87□□□□□ -1.15
YBX3-216ENST00000544622 CCL20P78556 96 aa7.87□□□□□ -1.15
YBX3-216ENST00000544622 CST9LP1Q5W188 147 aa7.87□□□□□ -1.15
YBX3-216ENST00000544622 ZC2HC1AQ96GY0 325 aa7.87□□□□□ -1.15
YBX3-216ENST00000544622 ZNF674Q2M3X9 581 aa7.86□□□□□ -1.15
YBX3-216ENST00000544622 ZNF876PQ49A33 203 aa7.86□□□□□ -1.15
YBX3-216ENST00000544622 PIK3CD-AS1Q5SR53 167 aa7.86□□□□□ -1.15
YBX3-216ENST00000544622 DNLZQ5SXM8 178 aa7.86□□□□□ -1.15
YBX3-216ENST00000544622 SLC51BQ86UW2 128 aa7.86□□□□□ -1.15
YBX3-216ENST00000544622 MLST8Q9BVC4 326 aa7.86□□□□□ -1.15
YBX3-216ENST00000544622 MRPS16Q9Y3D3 137 aaKnown RBP7.86□□□□□ -1.15
YBX3-216ENST00000544622 HERC2O95714 4834 aa7.86□□□□□ -1.15
YBX3-216ENST00000544622 TRGV4A0A0C4DH28 118 aa7.85□□□□□ -1.15
YBX3-216ENST00000544622 PGPEP1LA6NFU8 196 aa7.85□□□□□ -1.15
YBX3-216ENST00000544622 K7EQD1 137 aa7.85□□□□□ -1.15
YBX3-216ENST00000544622 RS1O15537 224 aa7.85□□□□□ -1.15
YBX3-216ENST00000544622 CIDEAO60543 219 aa7.85□□□□□ -1.15
YBX3-216ENST00000544622 SULT1A2P50226 295 aa7.85□□□□□ -1.15
YBX3-216ENST00000544622 MRPL23Q16540 153 aaKnown RBP7.85□□□□□ -1.15
YBX3-216ENST00000544622 CFAP126Q5VTH2 177 aa7.85□□□□□ -1.15
YBX3-216ENST00000544622 EIF5AL1Q6IS14 154 aaKnown RBP7.85□□□□□ -1.15
YBX3-216ENST00000544622 LYPD5Q6UWN5 251 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms