RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 IGLC6P0CF74 106 aa22.39■■□□□ 1.18
CCM2-219ENST00000544363 ANXA2RQ3ZCQ2 193 aa22.39■■□□□ 1.18
CCM2-219ENST00000544363 ATP5L2Q7Z4Y8 100 aa22.39■■□□□ 1.18
CCM2-219ENST00000544363 GTSCR1Q86UQ5 136 aa22.39■■□□□ 1.18
CCM2-219ENST00000544363 CRXO43186 299 aaPredicted RBP22.39■■□□□ 1.17
CCM2-219ENST00000544363 MUC21Q5SSG8 566 aa22.39■■□□□ 1.17
CCM2-219ENST00000544363 FER1L6-AS1Q8NA97 138 aa22.39■■□□□ 1.17
CCM2-219ENST00000544363 TPPP3Q9BW30 176 aa22.39■■□□□ 1.17
CCM2-219ENST00000544363 NOTCH3Q9UM47 2321 aa22.38■■□□□ 1.17
CCM2-219ENST00000544363 LYZL1Q6UWQ5 148 aa22.38■■□□□ 1.17
CCM2-219ENST00000544363 STAB1Q9NY15 2570 aa22.37■■□□□ 1.17
CCM2-219ENST00000544363 RASL11AQ6T310 242 aa22.37■■□□□ 1.17
CCM2-219ENST00000544363 COX19Q49B96 90 aa22.36■■□□□ 1.17
CCM2-219ENST00000544363 FAM159AQ6UWV7 190 aa22.36■■□□□ 1.17
CCM2-219ENST00000544363 A0A1B0GUT8 65 aa22.35■■□□□ 1.17
CCM2-219ENST00000544363 A0A1B0GXF2 115 aa22.35■■□□□ 1.17
CCM2-219ENST00000544363 TRGC2P03986 189 aa22.35■■□□□ 1.17
CCM2-219ENST00000544363 CTRLP40313 264 aa22.35■■□□□ 1.17
CCM2-219ENST00000544363 C1orf196B1AJZ1 125 aa22.35■■□□□ 1.17
CCM2-219ENST00000544363 ARMS2P0C7Q2 107 aa22.35■■□□□ 1.17
CCM2-219ENST00000544363 KCNS1Q96KK3 526 aa22.35■■□□□ 1.17
CCM2-219ENST00000544363 GNB1LQ9BYB4 327 aa22.35■■□□□ 1.17
CCM2-219ENST00000544363 AMBPP02760 352 aa22.34■■□□□ 1.17
CCM2-219ENST00000544363 NUTF2P61970 127 aaKnown RBP22.34■■□□□ 1.17
CCM2-219ENST00000544363 WDR73Q6P4I2 378 aa22.34■■□□□ 1.17
CCM2-219ENST00000544363 BORCS7Q96B45 105 aa22.34■■□□□ 1.17
CCM2-219ENST00000544363 COL6A5A8TX70 2615 aa22.34■■□□□ 1.17
CCM2-219ENST00000544363 HBBP68871 147 aa22.33■■□□□ 1.17
CCM2-219ENST00000544363 TDRG1Q3Y452 100 aa22.33■■□□□ 1.17
CCM2-219ENST00000544363 F2Z2F3 143 aa22.32■■□□□ 1.16
CCM2-219ENST00000544363 RIGQ13278 110 aa22.32■■□□□ 1.16
CCM2-219ENST00000544363 PRR31Q5SQ13 230 aa22.32■■□□□ 1.16
CCM2-219ENST00000544363 TMEM136Q6ZRR5 245 aa22.32■■□□□ 1.16
CCM2-219ENST00000544363 DEFB125Q8N687 156 aa22.32■■□□□ 1.16
CCM2-219ENST00000544363 TRAPPC1Q9Y5R8 145 aa22.32■■□□□ 1.16
CCM2-219ENST00000544363 SNURFLB1AK76 121 aa22.31■■□□□ 1.16
CCM2-219ENST00000544363 GNRH2O43555 120 aa22.31■■□□□ 1.16
CCM2-219ENST00000544363 RBMY1A1P0DJD3 496 aaKnown RBP22.31■■□□□ 1.16
CCM2-219ENST00000544363 RBMY1CP0DJD4 496 aa22.31■■□□□ 1.16
CCM2-219ENST00000544363 CAMPP49913 170 aa22.31■■□□□ 1.16
CCM2-219ENST00000544363 RBMY1FQ15415 496 aaKnown RBP22.31■■□□□ 1.16
CCM2-219ENST00000544363 ASIPP42127 132 aa22.31■■□□□ 1.16
CCM2-219ENST00000544363 DNLZQ5SXM8 178 aa22.31■■□□□ 1.16
CCM2-219ENST00000544363 SSBP4Q9BWG4 385 aaPredicted RBP22.31■■□□□ 1.16
CCM2-219ENST00000544363 IGHV1OR15-1A0A075B7D0 117 aa22.3■■□□□ 1.16
CCM2-219ENST00000544363 RAB4BP61018 213 aa22.3■■□□□ 1.16
CCM2-219ENST00000544363 PHOX2AO14813 284 aa22.29■■□□□ 1.16
CCM2-219ENST00000544363 INSP01308 110 aa22.29■■□□□ 1.16
CCM2-219ENST00000544363 MT-ND6P03923 174 aa22.29■■□□□ 1.16
CCM2-219ENST00000544363 OR5AL1P0C617 328 aa22.29■■□□□ 1.16
CCM2-219ENST00000544363 FABP9Q0Z7S8 132 aa22.29■■□□□ 1.16
CCM2-219ENST00000544363 C20orf144Q9BQM9 153 aa22.29■■□□□ 1.16
CCM2-219ENST00000544363 CNFNQ9BYD5 112 aa22.29■■□□□ 1.16
CCM2-219ENST00000544363 A0A1B0GW15 77 aa22.28■■□□□ 1.16
CCM2-219ENST00000544363 SNAI2O43623 268 aa22.28■■□□□ 1.16
CCM2-219ENST00000544363 S100A4P26447 101 aaKnown RBP22.28■■□□□ 1.16
CCM2-219ENST00000544363 RAB5BP61020 215 aa22.28■■□□□ 1.16
CCM2-219ENST00000544363 FRZBQ92765 325 aa22.28■■□□□ 1.16
CCM2-219ENST00000544363 XCL2Q9UBD3 114 aa22.28■■□□□ 1.16
CCM2-219ENST00000544363 MUC21A0A0G2JKD1 596 aa22.28■■□□□ 1.16
CCM2-219ENST00000544363 MUC21A0A140T8X8 626 aa22.28■■□□□ 1.16
CCM2-219ENST00000544363 H3BVH4 76 aa22.28■■□□□ 1.16
CCM2-219ENST00000544363 HLA-DQA1P01909 254 aa22.28■■□□□ 1.16
CCM2-219ENST00000544363 RPL35AP18077 110 aaKnown RBP22.28■■□□□ 1.16
CCM2-219ENST00000544363 MDFIQ99750 246 aa22.28■■□□□ 1.16
CCM2-219ENST00000544363 MED14OSP0DP75 135 aa22.27■■□□□ 1.16
CCM2-219ENST00000544363 OXLD1Q5BKU9 147 aa22.27■■□□□ 1.16
CCM2-219ENST00000544363 ZFP82Q8N141 532 aa22.27■■□□□ 1.16
CCM2-219ENST00000544363 MRPL18Q9H0U6 180 aaKnown RBP22.27■■□□□ 1.16
CCM2-219ENST00000544363 Q8N1Y9 231 aa22.26■■□□□ 1.15
CCM2-219ENST00000544363 S100A8P05109 93 aa22.25■■□□□ 1.15
CCM2-219ENST00000544363 SSTP61278 116 aa22.25■■□□□ 1.15
CCM2-219ENST00000544363 MORN3Q6PF18 240 aaPredicted RBP22.25■■□□□ 1.15
CCM2-219ENST00000544363 TP53TG3Q9ULZ0 132 aa22.25■■□□□ 1.15
CCM2-219ENST00000544363 RNASE3P12724 160 aaKnown RBP22.24■■□□□ 1.15
CCM2-219ENST00000544363 NTF3P20783 257 aa22.24■■□□□ 1.15
CCM2-219ENST00000544363 TIMM8BQ9Y5J9 83 aaPredicted RBP22.24■■□□□ 1.15
CCM2-219ENST00000544363 CMYA5Q8N3K9 4069 aa22.23■■□□□ 1.15
CCM2-219ENST00000544363 GIG44P09565 113 aaPredicted RBP22.23■■□□□ 1.15
CCM2-219ENST00000544363 TWIST1Q15672 202 aa22.23■■□□□ 1.15
CCM2-219ENST00000544363 GATD1Q8NB37 220 aa22.23■■□□□ 1.15
CCM2-219ENST00000544363 OR10AG1Q8NH19 301 aa22.23■■□□□ 1.15
CCM2-219ENST00000544363 SCRT2Q9NQ03 307 aa22.23■■□□□ 1.15
CCM2-219ENST00000544363 LURAP1LQ8IV03 231 aa22.22■■□□□ 1.15
CCM2-219ENST00000544363 LINC01587Q99440 93 aa22.22■■□□□ 1.15
CCM2-219ENST00000544363 LINC00467Q9BRT7 94 aa22.22■■□□□ 1.15
CCM2-219ENST00000544363 IGHV3-16A0A0C4DH30 117 aa22.21■■□□□ 1.15
CCM2-219ENST00000544363 CACNG7P62955 275 aa22.21■■□□□ 1.15
CCM2-219ENST00000544363 ANK2Q01484 3957 aa22.2■■□□□ 1.15
CCM2-219ENST00000544363 TRGV11A0A075B6L2 103 aa22.2■■□□□ 1.15
CCM2-219ENST00000544363 IGHV4-4A0A075B6R2 117 aa22.2■■□□□ 1.15
CCM2-219ENST00000544363 TRGC1P0CF51 173 aa22.2■■□□□ 1.15
CCM2-219ENST00000544363 C1QTNF4Q9BXJ3 329 aa22.2■■□□□ 1.15
CCM2-219ENST00000544363 CBY3A6NI87 242 aa22.2■■□□□ 1.14
CCM2-219ENST00000544363 APCSP02743 223 aa22.2■■□□□ 1.14
CCM2-219ENST00000544363 C1orf158Q8N1D5 194 aa22.2■■□□□ 1.14
CCM2-219ENST00000544363 TMEM256Q8N2U0 113 aa22.2■■□□□ 1.14
CCM2-219ENST00000544363 MSRB1Q9NZV6 116 aa22.2■■□□□ 1.14
CCM2-219ENST00000544363 PHLDA3Q9Y5J5 127 aa22.2■■□□□ 1.14
CCM2-219ENST00000544363 HIST1H2BKO60814 126 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms