RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 TYMSP04818 313 aa18.54■□□□□ 0.56
PDCD2-211ENST00000544336 LINC00299Q6ZSB3 139 aa18.54■□□□□ 0.56
PDCD2-211ENST00000544336 FAT1Q14517 4588 aa18.54■□□□□ 0.56
PDCD2-211ENST00000544336 TRAV8-1A0A0A6YYK1 113 aa18.53■□□□□ 0.56
PDCD2-211ENST00000544336 TRAV21A0A0B4J279 112 aa18.53■□□□□ 0.56
PDCD2-211ENST00000544336 RPL12P30050 165 aaKnown RBP18.53■□□□□ 0.56
PDCD2-211ENST00000544336 IFITM3Q01628 133 aa18.53■□□□□ 0.56
PDCD2-211ENST00000544336 FAM74A1Q5RGS3 127 aa18.53■□□□□ 0.56
PDCD2-211ENST00000544336 FRZBQ92765 325 aa18.53■□□□□ 0.56
PDCD2-211ENST00000544336 HERC1Q15751 4861 aa18.52■□□□□ 0.56
PDCD2-211ENST00000544336 SSNA1O43805 119 aa18.52■□□□□ 0.56
PDCD2-211ENST00000544336 GCSHP23434 173 aa18.52■□□□□ 0.56
PDCD2-211ENST00000544336 PPT1P50897 306 aa18.52■□□□□ 0.56
PDCD2-211ENST00000544336 GNG5P63218 68 aa18.52■□□□□ 0.56
PDCD2-211ENST00000544336 TVP23CQ96ET8 276 aa18.52■□□□□ 0.56
PDCD2-211ENST00000544336 TREM1Q9NP99 234 aa18.52■□□□□ 0.56
PDCD2-211ENST00000544336 SMR3BP02814 79 aaPredicted RBP18.51■□□□□ 0.55
PDCD2-211ENST00000544336 PET100P0DJ07 73 aa18.51■□□□□ 0.55
PDCD2-211ENST00000544336 C10orf126Q8N4M7 172 aa18.51■□□□□ 0.55
PDCD2-211ENST00000544336 WFDC1Q9HC57 220 aa18.51■□□□□ 0.55
PDCD2-211ENST00000544336 SDF2L1Q9HCN8 221 aa18.51■□□□□ 0.55
PDCD2-211ENST00000544336 A0A1W2PPV4 95 aa18.5■□□□□ 0.55
PDCD2-211ENST00000544336 HMGB3O15347 200 aaKnown RBP18.5■□□□□ 0.55
PDCD2-211ENST00000544336 HAMPP81172 84 aa18.5■□□□□ 0.55
PDCD2-211ENST00000544336 ACOT6Q3I5F7 207 aaPredicted RBP18.5■□□□□ 0.55
PDCD2-211ENST00000544336 SGK494Q96LW2 274 aa18.5■□□□□ 0.55
PDCD2-211ENST00000544336 PSCAO43653 123 aa18.49■□□□□ 0.55
PDCD2-211ENST00000544336 GATA1P15976 413 aaPredicted RBP18.49■□□□□ 0.55
PDCD2-211ENST00000544336 RAB2AP61019 212 aa18.49■□□□□ 0.55
PDCD2-211ENST00000544336 IGHV3-38A0A0C4DH36 116 aa18.48■□□□□ 0.55
PDCD2-211ENST00000544336 PQLC2Q6ZP29 291 aa18.48■□□□□ 0.55
PDCD2-211ENST00000544336 SH2D6Q7Z4S9 175 aa18.48■□□□□ 0.55
PDCD2-211ENST00000544336 ASB13Q8WXK3 278 aa18.48■□□□□ 0.55
PDCD2-211ENST00000544336 FBLL1A6NHQ2 334 aaKnown RBP18.47■□□□□ 0.55
PDCD2-211ENST00000544336 KCNS1Q96KK3 526 aa18.47■□□□□ 0.55
PDCD2-211ENST00000544336 MARVELD1Q9BSK0 173 aa18.46■□□□□ 0.55
PDCD2-211ENST00000544336 IGLV5-52A0A0A0MRZ9 124 aa18.45■□□□□ 0.54
PDCD2-211ENST00000544336 Q9HAA7 133 aa18.45■□□□□ 0.54
PDCD2-211ENST00000544336 IGHV3-73A0A0B4J1V6 119 aa18.44■□□□□ 0.54
PDCD2-211ENST00000544336 TIRAPP58753 221 aa18.44■□□□□ 0.54
PDCD2-211ENST00000544336 OR10J3Q5JRS4 329 aa18.44■□□□□ 0.54
PDCD2-211ENST00000544336 SLC25A29Q8N8R3 303 aa18.44■□□□□ 0.54
PDCD2-211ENST00000544336 OR10G9Q8NGN4 311 aa18.44■□□□□ 0.54
PDCD2-211ENST00000544336 OR10G7Q8NGN6 311 aa18.44■□□□□ 0.54
PDCD2-211ENST00000544336 ZNF876PQ49A33 203 aa18.43■□□□□ 0.54
PDCD2-211ENST00000544336 LINC01556Q5JQF7 62 aa18.43■□□□□ 0.54
PDCD2-211ENST00000544336 ARL6IP6Q8N6S5 226 aa18.43■□□□□ 0.54
PDCD2-211ENST00000544336 NDFIP1Q9BT67 221 aa18.43■□□□□ 0.54
PDCD2-211ENST00000544336 TRAV8-6A0A0B4J262 113 aa18.42■□□□□ 0.54
PDCD2-211ENST00000544336 LRCOL1A6NCL2 159 aa18.42■□□□□ 0.54
PDCD2-211ENST00000544336 IGHV3-30P01768 117 aa18.42■□□□□ 0.54
PDCD2-211ENST00000544336 IGHV3-33P01772 117 aa18.42■□□□□ 0.54
PDCD2-211ENST00000544336 PFN1P07737 140 aaKnown RBP18.42■□□□□ 0.54
PDCD2-211ENST00000544336 ARL14EPLP0DKL9 152 aa18.42■□□□□ 0.54
PDCD2-211ENST00000544336 IGHV3-30-3P0DP02 117 aa18.42■□□□□ 0.54
PDCD2-211ENST00000544336 IGHV3-30-5P0DP03 117 aa18.42■□□□□ 0.54
PDCD2-211ENST00000544336 ZNF80P51504 273 aaPredicted RBP18.42■□□□□ 0.54
PDCD2-211ENST00000544336 DPPA3Q6W0C5 159 aa18.42■□□□□ 0.54
PDCD2-211ENST00000544336 PRADC1Q9BSG0 188 aa18.42■□□□□ 0.54
PDCD2-211ENST00000544336 C11orf21Q9P2W6 132 aa18.42■□□□□ 0.54
PDCD2-211ENST00000544336 DMBT1Q9UGM3 2413 aaPredicted RBP18.41■□□□□ 0.54
PDCD2-211ENST00000544336 CFAP126Q5VTH2 177 aa18.41■□□□□ 0.54
PDCD2-211ENST00000544336 IBA57-AS1B1ANH7 110 aa18.4■□□□□ 0.54
PDCD2-211ENST00000544336 RS1O15537 224 aa18.4■□□□□ 0.54
PDCD2-211ENST00000544336 TMEM75Q8N9X5 138 aa18.4■□□□□ 0.54
PDCD2-211ENST00000544336 CDC34P49427 236 aaPredicted RBP18.39■□□□□ 0.53
PDCD2-211ENST00000544336 RHOHQ15669 191 aa18.39■□□□□ 0.53
PDCD2-211ENST00000544336 VPS13BQ7Z7G8 4022 aa18.39■□□□□ 0.53
PDCD2-211ENST00000544336 GCGP01275 180 aa18.38■□□□□ 0.53
PDCD2-211ENST00000544336 NTN5Q8WTR8 489 aaPredicted RBP18.38■□□□□ 0.53
PDCD2-211ENST00000544336 FAM229AH3BQW9 127 aa18.37■□□□□ 0.53
PDCD2-211ENST00000544336 TCRAP04437 139 aa18.37■□□□□ 0.53
PDCD2-211ENST00000544336 C5orf17Q8NAS9 161 aa18.37■□□□□ 0.53
PDCD2-211ENST00000544336 PSG8Q9UQ74 426 aa18.37■□□□□ 0.53
PDCD2-211ENST00000544336 SERTM2A0A1B0GWG4 89 aa18.36■□□□□ 0.53
PDCD2-211ENST00000544336 TRBV6-4A0A1B0GX49 114 aa18.36■□□□□ 0.53
PDCD2-211ENST00000544336 PGPEP1LA6NFU8 196 aa18.36■□□□□ 0.53
PDCD2-211ENST00000544336 TAAR5O14804 337 aa18.36■□□□□ 0.53
PDCD2-211ENST00000544336 DEFA1P59665 94 aa18.36■□□□□ 0.53
PDCD2-211ENST00000544336 DEFA3P59666 94 aa18.36■□□□□ 0.53
PDCD2-211ENST00000544336 ZNF506Q5JVG8 444 aa18.36■□□□□ 0.53
PDCD2-211ENST00000544336 Q8N814 137 aa18.36■□□□□ 0.53
PDCD2-211ENST00000544336 HSD17B11Q8NBQ5 300 aa18.36■□□□□ 0.53
PDCD2-211ENST00000544336 C9orf85Q96MD7 179 aa18.36■□□□□ 0.53
PDCD2-211ENST00000544336 K7EQM0 130 aa18.35■□□□□ 0.53
PDCD2-211ENST00000544336 STAG3L2P0CL84 134 aa18.35■□□□□ 0.53
PDCD2-211ENST00000544336 STAG3L3P0CL85 134 aa18.35■□□□□ 0.53
PDCD2-211ENST00000544336 LELP1Q5T871 98 aa18.35■□□□□ 0.53
PDCD2-211ENST00000544336 PRNTQ86SH4 94 aa18.35■□□□□ 0.53
PDCD2-211ENST00000544336 TMEM70Q9BUB7 260 aa18.35■□□□□ 0.53
PDCD2-211ENST00000544336 SRRM2Q9UQ35 2752 aaKnown RBP18.35■□□□□ 0.53
PDCD2-211ENST00000544336 GCHFRP30047 84 aa18.34■□□□□ 0.53
PDCD2-211ENST00000544336 ATP6V0E2Q8NHE4 81 aa18.34■□□□□ 0.53
PDCD2-211ENST00000544336 RAB24Q969Q5 203 aa18.34■□□□□ 0.53
PDCD2-211ENST00000544336 CIDEAO60543 219 aa18.33■□□□□ 0.52
PDCD2-211ENST00000544336 ZFP69Q49AA0 526 aa18.33■□□□□ 0.52
PDCD2-211ENST00000544336 SMUG1Q53HV7 270 aa18.33■□□□□ 0.52
PDCD2-211ENST00000544336 GTSF1LQ9H1H1 148 aa18.33■□□□□ 0.52
PDCD2-211ENST00000544336 FLG2Q5D862 2391 aaPredicted RBP18.33■□□□□ 0.52
PDCD2-211ENST00000544336 MYCBP2O75592 4640 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms