RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 KRTAP1-5Q9BYS1 174 aa12.93□□□□□ -0.34
TDG-208ENST00000544060 SDF2L1Q9HCN8 221 aa12.93□□□□□ -0.34
TDG-208ENST00000544060 RNF222A6NCQ9 220 aa12.92□□□□□ -0.34
TDG-208ENST00000544060 GNRH2O43555 120 aa12.92□□□□□ -0.34
TDG-208ENST00000544060 TCRAP04437 139 aa12.92□□□□□ -0.34
TDG-208ENST00000544060 SFTA3P0C7M3 94 aa12.92□□□□□ -0.34
TDG-208ENST00000544060 KIAA1109Q2LD37 5005 aa12.92□□□□□ -0.34
TDG-208ENST00000544060 RGS21Q2M5E4 152 aa12.92□□□□□ -0.34
TDG-208ENST00000544060 RPL7L1Q6DKI1 246 aaKnown RBP12.92□□□□□ -0.34
TDG-208ENST00000544060 SUN5Q8TC36 379 aa12.92□□□□□ -0.34
TDG-208ENST00000544060 PCNPQ8WW12 178 aaKnown RBP12.92□□□□□ -0.34
TDG-208ENST00000544060 ZNF479Q96JC4 524 aa12.92□□□□□ -0.34
TDG-208ENST00000544060 IGHV3-16A0A0C4DH30 117 aa12.91□□□□□ -0.34
TDG-208ENST00000544060 M0R2P5 195 aa12.91□□□□□ -0.34
TDG-208ENST00000544060 SIVA1O15304 175 aa12.91□□□□□ -0.34
TDG-208ENST00000544060 TYMSP04818 313 aa12.91□□□□□ -0.34
TDG-208ENST00000544060 SUMO1P63165 101 aaKnown RBP12.91□□□□□ -0.34
TDG-208ENST00000544060 TRAV4A0A0B4J268 109 aa12.9□□□□□ -0.34
TDG-208ENST00000544060 NXPH4O95158 308 aa12.9□□□□□ -0.34
TDG-208ENST00000544060 ZFP69Q49AA0 526 aa12.9□□□□□ -0.34
TDG-208ENST00000544060 OR4C5Q8NGB2 326 aa12.9□□□□□ -0.34
TDG-208ENST00000544060 C16orf90A8MZG2 172 aa12.89□□□□□ -0.35
TDG-208ENST00000544060 GGTLC3B5MD39 225 aa12.89□□□□□ -0.35
TDG-208ENST00000544060 SRIP30626 198 aa12.89□□□□□ -0.35
TDG-208ENST00000544060 FLI1Q01543 452 aaPredicted RBP12.89□□□□□ -0.35
TDG-208ENST00000544060 NEGR1Q7Z3B1 354 aa12.89□□□□□ -0.35
TDG-208ENST00000544060 CYB561D1Q8N8Q1 229 aa12.89□□□□□ -0.35
TDG-208ENST00000544060 EPDR1Q9UM22 224 aa12.89□□□□□ -0.35
TDG-208ENST00000544060 PSG8Q9UQ74 426 aa12.89□□□□□ -0.35
TDG-208ENST00000544060 GCGP01275 180 aa12.88□□□□□ -0.35
TDG-208ENST00000544060 ORM1P02763 201 aa12.88□□□□□ -0.35
TDG-208ENST00000544060 GYPEP15421 78 aa12.88□□□□□ -0.35
TDG-208ENST00000544060 BTF3P20290 206 aaKnown RBP12.88□□□□□ -0.35
TDG-208ENST00000544060 LYPD5Q6UWN5 251 aa12.88□□□□□ -0.35
TDG-208ENST00000544060 PRNTQ86SH4 94 aa12.88□□□□□ -0.35
TDG-208ENST00000544060 DYNC1H1Q14204 4646 aaKnown RBP12.88□□□□□ -0.35
TDG-208ENST00000544060 DNAH11Q96DT5 4516 aa12.88□□□□□ -0.35
TDG-208ENST00000544060 CTXND1A0A1B0GTU2 59 aa12.87□□□□□ -0.35
TDG-208ENST00000544060 FBLL1A6NHQ2 334 aaKnown RBP12.87□□□□□ -0.35
TDG-208ENST00000544060 C9JCJ5 164 aa12.87□□□□□ -0.35
TDG-208ENST00000544060 K7EQD1 137 aa12.87□□□□□ -0.35
TDG-208ENST00000544060 TAAR5O14804 337 aa12.87□□□□□ -0.35
TDG-208ENST00000544060 SMUG1Q53HV7 270 aa12.87□□□□□ -0.35
TDG-208ENST00000544060 AKR1C8PQ5T2L2 129 aa12.87□□□□□ -0.35
TDG-208ENST00000544060 TMEM75Q8N9X5 138 aa12.87□□□□□ -0.35
TDG-208ENST00000544060 A0A1W2PRE2 83 aa12.86□□□□□ -0.35
TDG-208ENST00000544060 ARPC5O15511 151 aa12.86□□□□□ -0.35
TDG-208ENST00000544060 ZNF80P51504 273 aaPredicted RBP12.86□□□□□ -0.35
TDG-208ENST00000544060 LINC00315P59091 139 aa12.86□□□□□ -0.35
TDG-208ENST00000544060 TXNDC17Q9BRA2 123 aa12.86□□□□□ -0.35
TDG-208ENST00000544060 IFNA7P01567 189 aa12.85□□□□□ -0.35
TDG-208ENST00000544060 IGLV2-11P01706 119 aa12.85□□□□□ -0.35
TDG-208ENST00000544060 PFN1P07737 140 aaKnown RBP12.85□□□□□ -0.35
TDG-208ENST00000544060 UBE2G2P60604 165 aa12.85□□□□□ -0.35
TDG-208ENST00000544060 ZNF726P1Q15940 193 aa12.85□□□□□ -0.35
TDG-208ENST00000544060 SAPCD1Q5SSQ6 148 aa12.85□□□□□ -0.35
TDG-208ENST00000544060 PPT1P50897 306 aa12.84□□□□□ -0.35
TDG-208ENST00000544060 C11orf21Q9P2W6 132 aa12.84□□□□□ -0.35
TDG-208ENST00000544060 G3V3Q6 166 aa12.83□□□□□ -0.36
TDG-208ENST00000544060 FGF8P55075 233 aaPredicted RBP12.83□□□□□ -0.36
TDG-208ENST00000544060 ZNF876PQ49A33 203 aa12.83□□□□□ -0.36
TDG-208ENST00000544060 SPATA12Q7Z6I5 190 aa12.83□□□□□ -0.36
TDG-208ENST00000544060 KRTAP17-1Q9BYP8 105 aa12.83□□□□□ -0.36
TDG-208ENST00000544060 TRAV9-2A0A087WT02 112 aa12.82□□□□□ -0.36
TDG-208ENST00000544060 TRAV34A0A0B4J273 112 aa12.82□□□□□ -0.36
TDG-208ENST00000544060 NHLRC2Q8NBF2 726 aa12.82□□□□□ -0.36
TDG-208ENST00000544060 NKX6-2Q9C056 277 aaPredicted RBP12.82□□□□□ -0.36
TDG-208ENST00000544060 LY96Q9Y6Y9 160 aa12.82□□□□□ -0.36
TDG-208ENST00000544060 MAP1LC3B2A6NCE7 125 aa12.81□□□□□ -0.36
TDG-208ENST00000544060 PEX7O00628 323 aa12.81□□□□□ -0.36
TDG-208ENST00000544060 SH2D6Q7Z4S9 175 aa12.81□□□□□ -0.36
TDG-208ENST00000544060 LINC00479Q96M42 142 aa12.81□□□□□ -0.36
TDG-208ENST00000544060 MAP1LC3BQ9GZQ8 125 aa12.81□□□□□ -0.36
TDG-208ENST00000544060 ARL2-SNX15V9GYD0 113 aa12.81□□□□□ -0.36
TDG-208ENST00000544060 LOC100131303A0A0U1RQF7 123 aa12.8□□□□□ -0.36
TDG-208ENST00000544060 FAM74A7A6NL05 159 aa12.8□□□□□ -0.36
TDG-208ENST00000544060 SMLR1H3BR10 107 aa12.8□□□□□ -0.36
TDG-208ENST00000544060 GATA1P15976 413 aaPredicted RBP12.8□□□□□ -0.36
TDG-208ENST00000544060 C9orf85Q96MD7 179 aa12.8□□□□□ -0.36
TDG-208ENST00000544060 CIDEAO60543 219 aa12.79□□□□□ -0.36
TDG-208ENST00000544060 EVI2AP22794 236 aa12.79□□□□□ -0.36
TDG-208ENST00000544060 CFAP126Q5VTH2 177 aa12.79□□□□□ -0.36
TDG-208ENST00000544060 NFE4Q86UQ8 179 aa12.79□□□□□ -0.36
TDG-208ENST00000544060 WFDC10BQ8IUB3 73 aa12.79□□□□□ -0.36
TDG-208ENST00000544060 STOML3Q8TAV4 291 aa12.79□□□□□ -0.36
TDG-208ENST00000544060 HIST1H2BAQ96A08 127 aa12.79□□□□□ -0.36
TDG-208ENST00000544060 CYTL1Q9NRR1 136 aa12.79□□□□□ -0.36
TDG-208ENST00000544060 IGHV3-73A0A0B4J1V6 119 aa12.78□□□□□ -0.36
TDG-208ENST00000544060 RS1O15537 224 aa12.78□□□□□ -0.36
TDG-208ENST00000544060 S100A4P26447 101 aaKnown RBP12.78□□□□□ -0.36
TDG-208ENST00000544060 ZNF506Q5JVG8 444 aa12.78□□□□□ -0.36
TDG-208ENST00000544060 Q6ZRN7 208 aaPredicted RBP12.78□□□□□ -0.36
TDG-208ENST00000544060 Q86TA4 180 aa12.78□□□□□ -0.36
TDG-208ENST00000544060 PRADC1Q9BSG0 188 aa12.78□□□□□ -0.36
TDG-208ENST00000544060 PGPEP1LA6NFU8 196 aa12.77□□□□□ -0.37
TDG-208ENST00000544060 FABP5P3A8MUU1 101 aa12.77□□□□□ -0.37
TDG-208ENST00000544060 K7EP13 123 aa12.77□□□□□ -0.37
TDG-208ENST00000544060 EREGO14944 169 aa12.77□□□□□ -0.37
TDG-208ENST00000544060 CDK2AP2O75956 126 aa12.77□□□□□ -0.37
TDG-208ENST00000544060 RNASE3P12724 160 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms