RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	TEPP	Q6URK8	271 aa		4.82	□□□□□ -1.64
CIT-213	ENST00000543324	FAM19A2	Q8N3H0	131 aa		4.82	□□□□□ -1.64
CIT-213	ENST00000543324	SRSF12	Q8WXF0	261 aa	Known RBP	4.82	□□□□□ -1.64
CIT-213	ENST00000543324	USMG5	Q96IX5	58 aa		4.82	□□□□□ -1.64
CIT-213	ENST00000543324	MRPL32	Q9BYC8	188 aa	Known RBP	4.82	□□□□□ -1.64
CIT-213	ENST00000543324	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.82	□□□□□ -1.64
CIT-213	ENST00000543324	TECR	Q9NZ01	308 aa	Known RBP	4.82	□□□□□ -1.64
CIT-213	ENST00000543324	PKHD1L1	Q86WI1	4243 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	OR2T8	A6NH00	312 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	CGB1	A6NKQ9	187 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	FAM223B	A6NKX1	122 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324		E7EUB6	86 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324		H3BRM9	83 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	SYS1-DBNDD2	H3BUS1	97 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	OR7C2	O60412	319 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	CSN3	P07498	182 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	OR9G9	P0C7N8	305 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	TAS2R45	P59539	299 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	POU2AF1	Q16633	256 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	MAJIN	Q3KP22	176 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	KIAA1644	Q3SXP7	199 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	VMA21	Q3ZAQ7	101 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	CT83	Q5H943	113 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	C10orf55	Q5SWW7	151 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	AMMECR1L	Q6DCA0	310 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	LCN12	Q6JVE5	192 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.81	□□□□□ -1.64
CIT-213	ENST00000543324	GTF2H5	Q6ZYL4	71 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	NEGR1	Q7Z3B1	354 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	FAM223A	Q8IWN6	122 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	TTC9C	Q8N5M4	171 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	STPG3	Q8N7X2	389 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	FER1L6-AS1	Q8NA97	138 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	OR9G4	Q8NGQ1	327 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	TMEM167A	Q8TBQ9	72 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	URB1-AS1	Q96HZ7	61 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	SMPX	Q9UHP9	88 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	FSIP2	Q5CZC0	6907 aa		4.81	□□□□□ -1.64
CIT-213	ENST00000543324	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	4.8	□□□□□ -1.64
CIT-213	ENST00000543324	TRAV8-6	A0A0B4J262	113 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	MUC21	A0A0G2JKD1	596 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	MUC21	A0A140T8X8	626 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	NUPR2	A6NF83	97 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	C9orf118	A6NHY6	69 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	NPIPB5	A8MRT5	1133 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	RTL8C	O15255	209 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	SIVA1	O15304	175 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	NUDT3	O95989	172 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	CRYGC	P07315	174 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	IGHV4-30-4	P0DP06	118 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	COX8A	P10176	69 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	BMI1	P35226	326 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324		Q56UQ5	140 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	MUC21	Q5SSG8	566 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	SPATA31B1P	Q5VZV4	182 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	SPATA12	Q7Z6I5	190 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	ATOH7	Q8N100	152 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	GATD1	Q8NB37	220 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	NUP35	Q8NFH5	326 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	OR5A1	Q8NGJ0	315 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	OR2K2	Q8NGT1	345 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	OR4A16	Q8NH70	328 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	TMEM190	Q8WZ59	177 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	CCDC140	Q96MF4	163 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	FANCD2OS	Q96PS1	177 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	RNASE7	Q9H1E1	156 aa	Known RBP	4.8	□□□□□ -1.64
CIT-213	ENST00000543324	HEYL	Q9NQ87	328 aa	Predicted RBP	4.8	□□□□□ -1.64
CIT-213	ENST00000543324	ZNF492	Q9P255	531 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	RPH3AL	Q9UNE2	315 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	ZNF257	Q9Y2Q1	563 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	OR51B2	Q9Y5P1	312 aa		4.8	□□□□□ -1.64
CIT-213	ENST00000543324	FAM231B	A6NCW3	169 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324		A6NDN8	102 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	C15orf61	A6NNL5	157 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	GGTLC3	B5MD39	225 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324		K7EP34	96 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	LGALS9	O00182	355 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	FCGR3B	O75015	233 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	CNIH1	O95406	144 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	C8orf88	P0DMB2	117 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	APELA	P0DMC3	54 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	HIST1H1E	P10412	219 aa	Known RBP	4.79	□□□□□ -1.64
CIT-213	ENST00000543324	GPR183	P32249	361 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	SYNJ2BP	P57105	145 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	ERVK-16	P61578	105 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	GDF5OS	Q5U4N7	250 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	LINC01545	Q5VT33	79 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	RNASEK	Q6P5S7	137 aa	Known RBP	4.79	□□□□□ -1.64
CIT-213	ENST00000543324	C2orf91	Q6ZV80	131 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	MIR17HG	Q75NE6	70 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	VKORC1L1	Q8N0U8	176 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	OR1B1	Q8NGR6	318 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	ZNF414	Q96IQ9	312 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	NDFIP1	Q9BT67	221 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	GFRA4	Q9GZZ7	299 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	HSPB8	Q9UJY1	196 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	RNF24	Q9Y225	148 aa		4.79	□□□□□ -1.64
CIT-213	ENST00000543324	IGLV11-55	A0A075B6I3	123 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	IGHV1-24	A0A0C4DH33	117 aa		4.78	□□□□□ -1.64
CIT-213	ENST00000543324	C7orf71	A4D174	169 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms