RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 PSG8Q9UQ74 426 aa12.05□□□□□ -0.48
LTBR-210ENST00000542830 DNAH11Q96DT5 4516 aa12.05□□□□□ -0.48
LTBR-210ENST00000542830 IGHV3-16A0A0C4DH30 117 aa12.04□□□□□ -0.48
LTBR-210ENST00000542830 GGTLC3B5MD39 225 aa12.04□□□□□ -0.48
LTBR-210ENST00000542830 G3V3Q6 166 aa12.04□□□□□ -0.48
LTBR-210ENST00000542830 M0R2P5 195 aa12.04□□□□□ -0.48
LTBR-210ENST00000542830 GNRH2O43555 120 aa12.04□□□□□ -0.48
LTBR-210ENST00000542830 BTF3P20290 206 aaKnown RBP12.04□□□□□ -0.48
LTBR-210ENST00000542830 MRPL23Q16540 153 aaKnown RBP12.04□□□□□ -0.48
LTBR-210ENST00000542830 ZFP69Q49AA0 526 aa12.04□□□□□ -0.48
LTBR-210ENST00000542830 AKR1C8PQ5T2L2 129 aa12.04□□□□□ -0.48
LTBR-210ENST00000542830 SGK494Q96LW2 274 aa12.04□□□□□ -0.48
LTBR-210ENST00000542830 C8orf49Q96NF6 230 aa12.04□□□□□ -0.48
LTBR-210ENST00000542830 PKD1P98161 4303 aa12.03□□□□□ -0.48
LTBR-210ENST00000542830 TRAV4A0A0B4J268 109 aa12.03□□□□□ -0.48
LTBR-210ENST00000542830 ARPC5O15511 151 aa12.03□□□□□ -0.48
LTBR-210ENST00000542830 TYMSP04818 313 aa12.03□□□□□ -0.48
LTBR-210ENST00000542830 MED14OSP0DP75 135 aa12.03□□□□□ -0.48
LTBR-210ENST00000542830 FLI1Q01543 452 aaPredicted RBP12.03□□□□□ -0.48
LTBR-210ENST00000542830 TMEM75Q8N9X5 138 aa12.03□□□□□ -0.48
LTBR-210ENST00000542830 DYNC1H1Q14204 4646 aaKnown RBP12.03□□□□□ -0.48
LTBR-210ENST00000542830 SFTA3P0C7M3 94 aa12.02□□□□□ -0.49
LTBR-210ENST00000542830 TNP2Q05952 138 aa12.02□□□□□ -0.49
LTBR-210ENST00000542830 SMUG1Q53HV7 270 aa12.02□□□□□ -0.49
LTBR-210ENST00000542830 SAPCD1Q5SSQ6 148 aa12.02□□□□□ -0.49
LTBR-210ENST00000542830 NEGR1Q7Z3B1 354 aa12.02□□□□□ -0.49
LTBR-210ENST00000542830 PCNPQ8WW12 178 aaKnown RBP12.02□□□□□ -0.49
LTBR-210ENST00000542830 ZNF479Q96JC4 524 aa12.02□□□□□ -0.49
LTBR-210ENST00000542830 NKX6-2Q9C056 277 aaPredicted RBP12.02□□□□□ -0.49
LTBR-210ENST00000542830 HERC2O95714 4834 aa12.01□□□□□ -0.49
LTBR-210ENST00000542830 GCGP01275 180 aa12.01□□□□□ -0.49
LTBR-210ENST00000542830 IGLV2-11P01706 119 aa12.01□□□□□ -0.49
LTBR-210ENST00000542830 ORM1P02763 201 aa12.01□□□□□ -0.49
LTBR-210ENST00000542830 PFN1P07737 140 aaKnown RBP12.01□□□□□ -0.49
LTBR-210ENST00000542830 ZNF726P1Q15940 193 aa12.01□□□□□ -0.49
LTBR-210ENST00000542830 PRNTQ86SH4 94 aa12.01□□□□□ -0.49
LTBR-210ENST00000542830 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
LTBR-210ENST00000542830 SIVA1O15304 175 aa12□□□□□ -0.49
LTBR-210ENST00000542830 IFNA7P01567 189 aa12□□□□□ -0.49
LTBR-210ENST00000542830 SRIP30626 198 aa12□□□□□ -0.49
LTBR-210ENST00000542830 PPT1P50897 306 aa12□□□□□ -0.49
LTBR-210ENST00000542830 KRTAP1-5Q9BYS1 174 aa12□□□□□ -0.49
LTBR-210ENST00000542830 KIAA1109Q2LD37 5005 aa11.99□□□□□ -0.49
LTBR-210ENST00000542830 C9JCJ5 164 aa11.99□□□□□ -0.49
LTBR-210ENST00000542830 K7EQD1 137 aa11.99□□□□□ -0.49
LTBR-210ENST00000542830 NXPH4O95158 308 aa11.99□□□□□ -0.49
LTBR-210ENST00000542830 ZNF80P51504 273 aaPredicted RBP11.99□□□□□ -0.49
LTBR-210ENST00000542830 LYPD5Q6UWN5 251 aa11.99□□□□□ -0.49
LTBR-210ENST00000542830 CYTL1Q9NRR1 136 aa11.99□□□□□ -0.49
LTBR-210ENST00000542830 CIDEAO60543 219 aa11.98□□□□□ -0.49
LTBR-210ENST00000542830 UBE2G2P60604 165 aa11.98□□□□□ -0.49
LTBR-210ENST00000542830 ZNF345Q14585 488 aa11.98□□□□□ -0.49
LTBR-210ENST00000542830 HIST1H2BAQ96A08 127 aa11.98□□□□□ -0.49
LTBR-210ENST00000542830 TXNDC17Q9BRA2 123 aa11.98□□□□□ -0.49
LTBR-210ENST00000542830 MAP1LC3B2A6NCE7 125 aa11.97□□□□□ -0.49
LTBR-210ENST00000542830 FAM74A7A6NL05 159 aa11.97□□□□□ -0.49
LTBR-210ENST00000542830 PEX7O00628 323 aa11.97□□□□□ -0.49
LTBR-210ENST00000542830 GYPEP15421 78 aa11.97□□□□□ -0.49
LTBR-210ENST00000542830 FGF8P55075 233 aaPredicted RBP11.97□□□□□ -0.49
LTBR-210ENST00000542830 STOML3Q8TAV4 291 aa11.97□□□□□ -0.49
LTBR-210ENST00000542830 MAP1LC3BQ9GZQ8 125 aa11.97□□□□□ -0.49
LTBR-210ENST00000542830 C11orf21Q9P2W6 132 aa11.97□□□□□ -0.49
LTBR-210ENST00000542830 SMLR1H3BR10 107 aa11.96□□□□□ -0.49
LTBR-210ENST00000542830 ZNF876PQ49A33 203 aa11.96□□□□□ -0.49
LTBR-210ENST00000542830 SH2D6Q7Z4S9 175 aa11.96□□□□□ -0.49
LTBR-210ENST00000542830 KCNRGQ8N5I3 272 aa11.96□□□□□ -0.49
LTBR-210ENST00000542830 LINC00479Q96M42 142 aa11.96□□□□□ -0.49
LTBR-210ENST00000542830 C9orf85Q96MD7 179 aa11.96□□□□□ -0.49
LTBR-210ENST00000542830 ARL2-SNX15V9GYD0 113 aa11.96□□□□□ -0.49
LTBR-210ENST00000542830 TRAV34A0A0B4J273 112 aa11.95□□□□□ -0.5
LTBR-210ENST00000542830 HMSDA8MTL9 139 aa11.95□□□□□ -0.5
LTBR-210ENST00000542830 ZNF575Q86XF7 245 aa11.95□□□□□ -0.5
LTBR-210ENST00000542830 PTH2Q96A98 100 aa11.95□□□□□ -0.5
LTBR-210ENST00000542830 TCEAL7Q9BRU2 100 aa11.95□□□□□ -0.5
LTBR-210ENST00000542830 TRAV9-2A0A087WT02 112 aa11.94□□□□□ -0.5
LTBR-210ENST00000542830 A0A0D9SG52 128 aa11.94□□□□□ -0.5
LTBR-210ENST00000542830 FABP5P3A8MUU1 101 aa11.94□□□□□ -0.5
LTBR-210ENST00000542830 C16orf90A8MZG2 172 aa11.94□□□□□ -0.5
LTBR-210ENST00000542830 GATA1P15976 413 aaPredicted RBP11.94□□□□□ -0.5
LTBR-210ENST00000542830 Q86TA4 180 aa11.94□□□□□ -0.5
LTBR-210ENST00000542830 UMAD1C9J7I0 102 aa11.93□□□□□ -0.5
LTBR-210ENST00000542830 K7EP13 123 aa11.93□□□□□ -0.5
LTBR-210ENST00000542830 RS1O15537 224 aa11.93□□□□□ -0.5
LTBR-210ENST00000542830 SEC11BP0C7V7 166 aa11.93□□□□□ -0.5
LTBR-210ENST00000542830 FHITP49789 147 aa11.93□□□□□ -0.5
LTBR-210ENST00000542830 LINC00315P59091 139 aa11.93□□□□□ -0.5
LTBR-210ENST00000542830 ZFP30Q9Y2G7 519 aa11.93□□□□□ -0.5
LTBR-210ENST00000542830 LY96Q9Y6Y9 160 aa11.93□□□□□ -0.5
LTBR-210ENST00000542830 RNASE3P12724 160 aaKnown RBP11.92□□□□□ -0.5
LTBR-210ENST00000542830 S100A4P26447 101 aaKnown RBP11.92□□□□□ -0.5
LTBR-210ENST00000542830 PIK3CD-AS1Q5SR53 167 aa11.92□□□□□ -0.5
LTBR-210ENST00000542830 CFAP126Q5VTH2 177 aa11.92□□□□□ -0.5
LTBR-210ENST00000542830 FMC1Q96HJ9 113 aa11.92□□□□□ -0.5
LTBR-210ENST00000542830 PRADC1Q9BSG0 188 aa11.92□□□□□ -0.5
LTBR-210ENST00000542830 IGKV3D-20A0A0C4DH25 116 aa11.91□□□□□ -0.5
LTBR-210ENST00000542830 KANTRA0A1W2PQU2 76 aa11.91□□□□□ -0.5
LTBR-210ENST00000542830 ASIPP42127 132 aa11.91□□□□□ -0.5
LTBR-210ENST00000542830 TIRAPP58753 221 aa11.91□□□□□ -0.5
LTBR-210ENST00000542830 UBE2G1P62253 170 aa11.91□□□□□ -0.5
LTBR-210ENST00000542830 EIF5AP63241 154 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms