RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 F8P00451 2351 aa-0.11□□□□□ -2.43
KNTC1-213ENST00000542727 PLXNA1Q9UIW2 1896 aa-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 MYH9P35579 1960 aaKnown RBP-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 C9JAW5 83 aa-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 SERPINB1P30740 379 aa-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 S100A11P31949 105 aa-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 RHOHQ15669 191 aa-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 LYPD5Q6UWN5 251 aa-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 LINC00305Q7Z4B0 112 aa-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 VPS25Q9BRG1 176 aa-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 LXNQ9BS40 222 aa-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 GID8Q9NWU2 228 aa-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 SPAG17Q6Q759 2223 aa-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.12□□□□□ -2.43
KNTC1-213ENST00000542727 FAM135BQ49AJ0 1406 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 YTHDC2Q9H6S0 1430 aaKnown RBP-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 WNK2Q9Y3S1 2297 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 KIDINS220Q9ULH0 1771 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 EIF3AQ14152 1382 aaKnown RBP-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 A0A096LNT2 108 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 TRAV13-1A0A0B4J241 112 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 TRBV27A0A0K0K1C4 114 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 PGRMC1O00264 195 aaKnown RBP-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 FAM107AO95990 144 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 CCKP06307 115 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 MPC1LP0DKB6 136 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 CKS2P33552 79 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 POLR2JP52435 117 aaKnown RBP-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 DCUN1D2Q6PH85 259 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 STX12Q86Y82 276 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 TMEM141Q96I45 108 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 CCDC32Q9BV29 185 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 BET1LQ9NYM9 111 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 PIEZO1Q92508 2521 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 NEBP20929 6669 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 PARP14Q460N5 1801 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 ABCA4P78363 2273 aa-0.13□□□□□ -2.43
KNTC1-213ENST00000542727 DOCK11Q5JSL3 2073 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 KDM5CP41229 1560 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 CELSR1Q9NYQ6 3014 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 VIRMAQ69YN4 1812 aaKnown RBP-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 TRAV12-2A0A075B6T6 113 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 IGHV1-24A0A0C4DH33 117 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 TEX49A0A1B0GTD5 131 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 H3BMG7 143 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 BLCAPP62952 87 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 C3orf33Q6P1S2 294 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 OR51A4Q8NGJ6 313 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 BPESC1Q9GZL8 116 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 UBR5O95071 2799 aaPredicted RBP-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 CADP27708 2225 aa-0.14□□□□□ -2.43
KNTC1-213ENST00000542727 AKAP11Q9UKA4 1901 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 MYH13Q9UKX3 1938 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 TRBV10-1A0A0K0K1A3 114 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 PNMA8CA0A1B0GUJ8 204 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 MAP1LC3B2A6NCE7 125 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 E7EQ34 232 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 ZNF670-ZNF695F2Z2N8 137 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 CFDP00746 253 aaPredicted RBP-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 SLC25A4P12235 298 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 CRYGSP22914 178 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 TRIQKQ629K1 86 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 HRCT1Q6UXD1 115 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 MORN4Q8NDC4 146 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 JMJD1CQ15652 2540 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 BLMP54132 1417 aaPredicted RBP-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 POLQO75417 2590 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 ARFGEF1Q9Y6D6 1849 aa-0.15□□□□□ -2.43
KNTC1-213ENST00000542727 PCLOQ9Y6V0 5065 aa-0.16□□□□□ -2.43
KNTC1-213ENST00000542727 CPDO75976 1380 aa-0.16□□□□□ -2.43
KNTC1-213ENST00000542727 HIVEP3Q5T1R4 2406 aa-0.16□□□□□ -2.43
KNTC1-213ENST00000542727 TRAV17A0A0B4J275 112 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 RBAKDNA6NC62 111 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 PPP5D1E7EU14 171 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 M0QZK8 103 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 HBDP02042 147 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 APODP05090 189 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 ADCYAP1P18509 176 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 G0S2P27469 103 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 CRYBA4P53673 196 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 PCBD1P61457 104 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 OR5A2Q8NGI9 324 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 CDC26Q8NHZ8 85 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 BRK1Q8WUW1 75 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 PPDPFLQ8WWR9 84 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 TRAPPC2LQ9UL33 140 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 CELSR2Q9HCU4 2923 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 UNC13BO14795 1591 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 LAMC3Q9Y6N6 1575 aa-0.16□□□□□ -2.44
KNTC1-213ENST00000542727 CASZ1Q86V15 1759 aa-0.17□□□□□ -2.44
KNTC1-213ENST00000542727 KMT2CQ8NEZ4 4911 aaKnown RBP-0.17□□□□□ -2.44
KNTC1-213ENST00000542727 LOC107984640A0A0U1RRK4 108 aa-0.17□□□□□ -2.44
KNTC1-213ENST00000542727 TCRBV3S1A0A5B6 114 aa-0.17□□□□□ -2.44
KNTC1-213ENST00000542727 TMEM238C9JI98 176 aa-0.17□□□□□ -2.44
KNTC1-213ENST00000542727 SOGA1O94964 1423 aa-0.17□□□□□ -2.44
KNTC1-213ENST00000542727 OR2H2O95918 312 aa-0.17□□□□□ -2.44
KNTC1-213ENST00000542727 NMBP08949 121 aa-0.17□□□□□ -2.44
KNTC1-213ENST00000542727 PYYP10082 97 aa-0.17□□□□□ -2.44
KNTC1-213ENST00000542727 COX4I1P13073 169 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms