RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TRGV11A0A075B6L2 103 aa16.68■□□□□ 0.26
HOMER3-205ENST00000542541 C19orf71A6NCJ1 209 aa16.68■□□□□ 0.26
HOMER3-205ENST00000542541 RPL23P62829 140 aaKnown RBP16.68■□□□□ 0.26
HOMER3-205ENST00000542541 TMEM263Q8WUH6 116 aaKnown RBP16.68■□□□□ 0.26
HOMER3-205ENST00000542541 C16orf74Q96GX8 76 aa16.68■□□□□ 0.26
HOMER3-205ENST00000542541 B4DEV8 164 aa16.67■□□□□ 0.26
HOMER3-205ENST00000542541 P01737 135 aa16.67■□□□□ 0.26
HOMER3-205ENST00000542541 PNRC1Q12796 327 aaPredicted RBP16.67■□□□□ 0.26
HOMER3-205ENST00000542541 ADIRFQ15847 76 aa16.67■□□□□ 0.26
HOMER3-205ENST00000542541 LINC01559Q495D7 138 aa16.67■□□□□ 0.26
HOMER3-205ENST00000542541 IGKV3D-20A0A0C4DH25 116 aa16.67■□□□□ 0.26
HOMER3-205ENST00000542541 TMEM189A5PLL7 270 aa16.67■□□□□ 0.26
HOMER3-205ENST00000542541 M0R036 132 aa16.67■□□□□ 0.26
HOMER3-205ENST00000542541 PRM2P04554 102 aa16.67■□□□□ 0.26
HOMER3-205ENST00000542541 AZU1P20160 251 aa16.67■□□□□ 0.26
HOMER3-205ENST00000542541 NBEAL2Q6ZNJ1 2754 aa16.66■□□□□ 0.26
HOMER3-205ENST00000542541 IGHV4-28A0A0C4DH34 117 aa16.66■□□□□ 0.26
HOMER3-205ENST00000542541 KRBOX1C9JBD0 128 aa16.66■□□□□ 0.26
HOMER3-205ENST00000542541 ERVFC1-1P60608 527 aa16.66■□□□□ 0.26
HOMER3-205ENST00000542541 IBA57Q5T440 356 aaKnown RBP16.66■□□□□ 0.26
HOMER3-205ENST00000542541 FAM231DQ6ZW35 169 aa16.66■□□□□ 0.26
HOMER3-205ENST00000542541 Q8NAQ8 132 aa16.66■□□□□ 0.26
HOMER3-205ENST00000542541 NUDT10Q8NFP7 164 aa16.66■□□□□ 0.26
HOMER3-205ENST00000542541 NUDT11Q96G61 164 aa16.66■□□□□ 0.26
HOMER3-205ENST00000542541 COL7A1Q02388 2944 aa16.66■□□□□ 0.26
HOMER3-205ENST00000542541 SLC7A5P1Q8MH63 180 aa16.65■□□□□ 0.26
HOMER3-205ENST00000542541 RNASE8Q8TDE3 154 aaKnown RBP16.65■□□□□ 0.26
HOMER3-205ENST00000542541 TP53TG3Q9ULZ0 132 aa16.65■□□□□ 0.26
HOMER3-205ENST00000542541 GNRH2O43555 120 aa16.64■□□□□ 0.25
HOMER3-205ENST00000542541 ISOC2Q96AB3 205 aa16.64■□□□□ 0.25
HOMER3-205ENST00000542541 RNASE7Q9H1E1 156 aaKnown RBP16.64■□□□□ 0.25
HOMER3-205ENST00000542541 XKRY2A2RUG3 117 aa16.63■□□□□ 0.25
HOMER3-205ENST00000542541 TYMSP04818 313 aa16.63■□□□□ 0.25
HOMER3-205ENST00000542541 ADCYAP1P18509 176 aa16.63■□□□□ 0.25
HOMER3-205ENST00000542541 RPS20P60866 119 aaKnown RBP16.63■□□□□ 0.25
HOMER3-205ENST00000542541 C15orf54Q8N8G6 183 aa16.63■□□□□ 0.25
HOMER3-205ENST00000542541 OR2D3Q8NGH3 330 aa16.63■□□□□ 0.25
HOMER3-205ENST00000542541 ZNF415Q09FC8 603 aa16.63■□□□□ 0.25
HOMER3-205ENST00000542541 C11orf68Q9H3H3 251 aaKnown RBP16.63■□□□□ 0.25
HOMER3-205ENST00000542541 OSTCQ9NRP0 149 aa16.63■□□□□ 0.25
HOMER3-205ENST00000542541 TMSB15BA0A087X1C1 80 aa16.62■□□□□ 0.25
HOMER3-205ENST00000542541 SNURFLB1AK76 121 aa16.62■□□□□ 0.25
HOMER3-205ENST00000542541 S100A4P26447 101 aaKnown RBP16.62■□□□□ 0.25
HOMER3-205ENST00000542541 ASIPP42127 132 aa16.62■□□□□ 0.25
HOMER3-205ENST00000542541 C10orf91Q5T1B1 145 aa16.62■□□□□ 0.25
HOMER3-205ENST00000542541 SFRP2Q96HF1 295 aa16.62■□□□□ 0.25
HOMER3-205ENST00000542541 RPP21Q9H633 154 aaKnown RBP16.62■□□□□ 0.25
HOMER3-205ENST00000542541 U3KQK5 164 aa16.62■□□□□ 0.25
HOMER3-205ENST00000542541 IGHV3-16A0A0C4DH30 117 aa16.61■□□□□ 0.25
HOMER3-205ENST00000542541 GATCO43716 136 aaKnown RBP16.61■□□□□ 0.25
HOMER3-205ENST00000542541 CXCL1P09341 107 aa16.61■□□□□ 0.25
HOMER3-205ENST00000542541 EMP1P54849 157 aa16.61■□□□□ 0.25
HOMER3-205ENST00000542541 GSN-AS1Q9NRJ2 163 aa16.61■□□□□ 0.25
HOMER3-205ENST00000542541 RPL19P84098 196 aaKnown RBP16.6■□□□□ 0.25
HOMER3-205ENST00000542541 DNLZQ5SXM8 178 aa16.6■□□□□ 0.25
HOMER3-205ENST00000542541 C11orf72Q8NBR9 251 aa16.6■□□□□ 0.25
HOMER3-205ENST00000542541 MDFICQ9P1T7 246 aa16.6■□□□□ 0.25
HOMER3-205ENST00000542541 CARHSP1Q9Y2V2 147 aaKnown RBP16.6■□□□□ 0.25
HOMER3-205ENST00000542541 TIMM8BQ9Y5J9 83 aaPredicted RBP16.6■□□□□ 0.25
HOMER3-205ENST00000542541 DEFB4AO15263 64 aa16.59■□□□□ 0.25
HOMER3-205ENST00000542541 TCL1AP56279 114 aa16.59■□□□□ 0.25
HOMER3-205ENST00000542541 OR10G8Q8NGN5 311 aa16.59■□□□□ 0.25
HOMER3-205ENST00000542541 HUWE1Q7Z6Z7 4374 aaKnown RBP16.59■□□□□ 0.25
HOMER3-205ENST00000542541 TGP01266 2768 aa16.59■□□□□ 0.25
HOMER3-205ENST00000542541 PLAC8L1A1L4L8 177 aa16.59■□□□□ 0.25
HOMER3-205ENST00000542541 GRIFINA4D1Z8 144 aa16.59■□□□□ 0.25
HOMER3-205ENST00000542541 SPXQ9BT56 116 aa16.59■□□□□ 0.25
HOMER3-205ENST00000542541 A0A0J9YWU9 116 aa16.58■□□□□ 0.24
HOMER3-205ENST00000542541 DAZ2Q13117 558 aaKnown RBP16.58■□□□□ 0.24
HOMER3-205ENST00000542541 CT83Q5H943 113 aa16.58■□□□□ 0.24
HOMER3-205ENST00000542541 A8MWL6 223 aa16.57■□□□□ 0.24
HOMER3-205ENST00000542541 IL36BQ9NZH7 164 aa16.57■□□□□ 0.24
HOMER3-205ENST00000542541 TEX48A0A1B0GUV7 120 aa16.56■□□□□ 0.24
HOMER3-205ENST00000542541 ZNF575Q86XF7 245 aa16.56■□□□□ 0.24
HOMER3-205ENST00000542541 NOP10Q9NPE3 64 aaKnown RBP16.56■□□□□ 0.24
HOMER3-205ENST00000542541 LYRM9A8MSI8 78 aa16.56■□□□□ 0.24
HOMER3-205ENST00000542541 PPP1R2P9O14990 202 aa16.56■□□□□ 0.24
HOMER3-205ENST00000542541 MT-ND4LP03901 98 aa16.56■□□□□ 0.24
HOMER3-205ENST00000542541 SPART-AS1P0CW21 52 aa16.56■□□□□ 0.24
HOMER3-205ENST00000542541 MED14OSP0DP75 135 aa16.56■□□□□ 0.24
HOMER3-205ENST00000542541 RNASE3P12724 160 aaKnown RBP16.56■□□□□ 0.24
HOMER3-205ENST00000542541 TENM3Q9P273 2699 aa16.55■□□□□ 0.24
HOMER3-205ENST00000542541 ARMS2P0C7Q2 107 aa16.55■□□□□ 0.24
HOMER3-205ENST00000542541 IL17DQ8TAD2 202 aa16.55■□□□□ 0.24
HOMER3-205ENST00000542541 C9orf85Q96MD7 179 aa16.55■□□□□ 0.24
HOMER3-205ENST00000542541 A0A1W2PPQ1 181 aa16.54■□□□□ 0.24
HOMER3-205ENST00000542541 H3BVH4 76 aa16.54■□□□□ 0.24
HOMER3-205ENST00000542541 APOC3P02656 99 aa16.54■□□□□ 0.24
HOMER3-205ENST00000542541 FAM222AQ5U5X8 452 aa16.54■□□□□ 0.24
HOMER3-205ENST00000542541 ANAPC16Q96DE5 110 aa16.54■□□□□ 0.24
HOMER3-205ENST00000542541 DKK2Q9UBU2 259 aa16.54■□□□□ 0.24
HOMER3-205ENST00000542541 V9GYV3 84 aa16.54■□□□□ 0.24
HOMER3-205ENST00000542541 LGALS9BQ3B8N2 356 aa16.53■□□□□ 0.24
HOMER3-205ENST00000542541 CXorf65A6NEN9 183 aa16.52■□□□□ 0.24
HOMER3-205ENST00000542541 M0R2P5 195 aa16.52■□□□□ 0.24
HOMER3-205ENST00000542541 GZMBP10144 247 aa16.52■□□□□ 0.24
HOMER3-205ENST00000542541 RNF212Q495C1 297 aa16.52■□□□□ 0.24
HOMER3-205ENST00000542541 SVBPQ8N300 66 aa16.52■□□□□ 0.24
HOMER3-205ENST00000542541 FER1L6-AS1Q8NA97 138 aa16.52■□□□□ 0.24
HOMER3-205ENST00000542541 TSKUQ8WUA8 353 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms