RNA–Protein interactions for RNA: ENST00000541588.5

RAB6A-207, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB6A, Length 758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-207ENST00000541588 IGHV3-33P01772 117 aa12.16□□□□□ -0.46
RAB6A-207ENST00000541588 IGHV3-30-3P0DP02 117 aa12.16□□□□□ -0.46
RAB6A-207ENST00000541588 IGHV3-30-5P0DP03 117 aa12.16□□□□□ -0.46
RAB6A-207ENST00000541588 RPH3ALQ9UNE2 315 aa12.16□□□□□ -0.46
RAB6A-207ENST00000541588 PFN1P07737 140 aaKnown RBP12.15□□□□□ -0.46
RAB6A-207ENST00000541588 TMED6Q8WW62 240 aa12.15□□□□□ -0.46
RAB6A-207ENST00000541588 OR5AC2Q9NZP5 309 aa12.15□□□□□ -0.46
RAB6A-207ENST00000541588 FBLL1A6NHQ2 334 aaKnown RBP12.14□□□□□ -0.47
RAB6A-207ENST00000541588 C17orf112F2Z3M2 114 aa12.14□□□□□ -0.47
RAB6A-207ENST00000541588 TYMSP04818 313 aa12.14□□□□□ -0.47
RAB6A-207ENST00000541588 LRRC37A5PQ49AS3 106 aa12.14□□□□□ -0.47
RAB6A-207ENST00000541588 SLC25A29Q8N8R3 303 aa12.14□□□□□ -0.47
RAB6A-207ENST00000541588 TRAV21A0A0B4J279 112 aa12.13□□□□□ -0.47
RAB6A-207ENST00000541588 F6UZH7 168 aa12.13□□□□□ -0.47
RAB6A-207ENST00000541588 SIX6O95475 246 aa12.13□□□□□ -0.47
RAB6A-207ENST00000541588 C1QBP02746 253 aa12.13□□□□□ -0.47
RAB6A-207ENST00000541588 PLA2G1BP04054 148 aaKnown RBP12.13□□□□□ -0.47
RAB6A-207ENST00000541588 KHDC3LQ587J8 217 aa12.13□□□□□ -0.47
RAB6A-207ENST00000541588 FFAR4Q5NUL3 377 aa12.13□□□□□ -0.47
RAB6A-207ENST00000541588 CMTM2Q8TAZ6 248 aa12.13□□□□□ -0.47
RAB6A-207ENST00000541588 SDF2L1Q9HCN8 221 aa12.13□□□□□ -0.47
RAB6A-207ENST00000541588 FAM240BA0A1B0GVZ2 78 aa12.12□□□□□ -0.47
RAB6A-207ENST00000541588 PGPA6NDG6 321 aa12.12□□□□□ -0.47
RAB6A-207ENST00000541588 EIF3GO75821 320 aaKnown RBP eCLIP12.12□□□□□ -0.47
RAB6A-207ENST00000541588 PRADC1Q9BSG0 188 aa12.12□□□□□ -0.47
RAB6A-207ENST00000541588 OTORQ9NRC9 128 aa12.12□□□□□ -0.47
RAB6A-207ENST00000541588 H0YIZ8 118 aa12.11□□□□□ -0.47
RAB6A-207ENST00000541588 TAS2R45P59539 299 aa12.11□□□□□ -0.47
RAB6A-207ENST00000541588 WFDC2Q14508 124 aa12.11□□□□□ -0.47
RAB6A-207ENST00000541588 RHOHQ15669 191 aa12.11□□□□□ -0.47
RAB6A-207ENST00000541588 LELP1Q5T871 98 aa12.11□□□□□ -0.47
RAB6A-207ENST00000541588 GOLT1AQ6ZVE7 132 aa12.11□□□□□ -0.47
RAB6A-207ENST00000541588 LINC00528Q8N1L1 170 aa12.11□□□□□ -0.47
RAB6A-207ENST00000541588 TVP23CQ96ET8 276 aa12.11□□□□□ -0.47
RAB6A-207ENST00000541588 ATP5SQ99766 215 aa12.11□□□□□ -0.47
RAB6A-207ENST00000541588 NMES1Q9C002 83 aa12.11□□□□□ -0.47
RAB6A-207ENST00000541588 TREM1Q9NP99 234 aa12.11□□□□□ -0.47
RAB6A-207ENST00000541588 TRAV8-1A0A0A6YYK1 113 aa12.1□□□□□ -0.47
RAB6A-207ENST00000541588 IGHV3-73A0A0B4J1V6 119 aa12.1□□□□□ -0.47
RAB6A-207ENST00000541588 KRTAP29-1A8MX34 341 aaPredicted RBP12.1□□□□□ -0.47
RAB6A-207ENST00000541588 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
RAB6A-207ENST00000541588 FAM74A1Q5RGS3 127 aa12.1□□□□□ -0.47
RAB6A-207ENST00000541588 CFAP126Q5VTH2 177 aa12.1□□□□□ -0.47
RAB6A-207ENST00000541588 Q6ZSA8 131 aa12.1□□□□□ -0.47
RAB6A-207ENST00000541588 ASB13Q8WXK3 278 aa12.1□□□□□ -0.47
RAB6A-207ENST00000541588 KCNS1Q96KK3 526 aa12.1□□□□□ -0.47
RAB6A-207ENST00000541588 TM2D2Q9BX73 214 aa12.1□□□□□ -0.47
RAB6A-207ENST00000541588 MBD2Q9UBB5 411 aa12.1□□□□□ -0.47
RAB6A-207ENST00000541588 TRBV6-4A0A1B0GX49 114 aa12.09□□□□□ -0.47
RAB6A-207ENST00000541588 LAGE3Q14657 143 aa12.09□□□□□ -0.47
RAB6A-207ENST00000541588 DPPA3Q6W0C5 159 aa12.09□□□□□ -0.47
RAB6A-207ENST00000541588 LECT2O14960 151 aa12.08□□□□□ -0.48
RAB6A-207ENST00000541588 RS1O15537 224 aa12.08□□□□□ -0.48
RAB6A-207ENST00000541588 Q8N3U1 123 aa12.08□□□□□ -0.48
RAB6A-207ENST00000541588 ATP6V0E2Q8NHE4 81 aa12.08□□□□□ -0.48
RAB6A-207ENST00000541588 DEFB104AQ8WTQ1 72 aa12.08□□□□□ -0.48
RAB6A-207ENST00000541588 GTSF1LQ9H1H1 148 aa12.08□□□□□ -0.48
RAB6A-207ENST00000541588 GNG5P63218 68 aa12.07□□□□□ -0.48
RAB6A-207ENST00000541588 SGK494Q96LW2 274 aa12.07□□□□□ -0.48
RAB6A-207ENST00000541588 CCDC32Q9BV29 185 aa12.07□□□□□ -0.48
RAB6A-207ENST00000541588 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.06□□□□□ -0.48
RAB6A-207ENST00000541588 CIDEAO60543 219 aa12.06□□□□□ -0.48
RAB6A-207ENST00000541588 MZT2BQ6NZ67 158 aa12.06□□□□□ -0.48
RAB6A-207ENST00000541588 SCGB1C1Q8TD33 95 aa12.06□□□□□ -0.48
RAB6A-207ENST00000541588 ARL6IP6Q8N6S5 226 aa12.05□□□□□ -0.48
RAB6A-207ENST00000541588 SMIM3Q9BZL3 60 aa12.05□□□□□ -0.48
RAB6A-207ENST00000541588 C11orf21Q9P2W6 132 aa12.05□□□□□ -0.48
RAB6A-207ENST00000541588 HSPB11Q9Y547 144 aa12.05□□□□□ -0.48
RAB6A-207ENST00000541588 TRAV8-3A0A0A6YYJ7 113 aa12.04□□□□□ -0.48
RAB6A-207ENST00000541588 PGPEP1LA6NFU8 196 aa12.04□□□□□ -0.48
RAB6A-207ENST00000541588 MGST1P10620 155 aaKnown RBP12.04□□□□□ -0.48
RAB6A-207ENST00000541588 CYCSP99999 105 aaKnown RBP12.04□□□□□ -0.48
RAB6A-207ENST00000541588 LINC01620Q4KN68 170 aa12.04□□□□□ -0.48
RAB6A-207ENST00000541588 ZNF506Q5JVG8 444 aa12.04□□□□□ -0.48
RAB6A-207ENST00000541588 PQLC2Q6ZP29 291 aa12.04□□□□□ -0.48
RAB6A-207ENST00000541588 NDFIP1Q9BT67 221 aa12.04□□□□□ -0.48
RAB6A-207ENST00000541588 LRP1Q07954 4544 aaKnown RBP12.04□□□□□ -0.48
RAB6A-207ENST00000541588 A0A1W2PPV4 95 aa12.03□□□□□ -0.48
RAB6A-207ENST00000541588 ZNF80P51504 273 aaPredicted RBP12.03□□□□□ -0.48
RAB6A-207ENST00000541588 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
RAB6A-207ENST00000541588 TMEM75Q8N9X5 138 aa12.03□□□□□ -0.48
RAB6A-207ENST00000541588 PPP1R1CQ8WVI7 109 aa12.03□□□□□ -0.48
RAB6A-207ENST00000541588 C9orf85Q96MD7 179 aa12.03□□□□□ -0.48
RAB6A-207ENST00000541588 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
RAB6A-207ENST00000541588 TAAR5O14804 337 aa12.02□□□□□ -0.49
RAB6A-207ENST00000541588 HMGB3O15347 200 aaKnown RBP12.02□□□□□ -0.49
RAB6A-207ENST00000541588 ASAH1Q13510 395 aa12.02□□□□□ -0.49
RAB6A-207ENST00000541588 ACOT6Q3I5F7 207 aaPredicted RBP12.02□□□□□ -0.49
RAB6A-207ENST00000541588 SCXQ7RTU7 201 aa12.02□□□□□ -0.49
RAB6A-207ENST00000541588 BAALCQ8WXS3 180 aa12.02□□□□□ -0.49
RAB6A-207ENST00000541588 GAGE12JA6NER3 117 aa12.01□□□□□ -0.49
RAB6A-207ENST00000541588 GCGP01275 180 aa12.01□□□□□ -0.49
RAB6A-207ENST00000541588 H2BFSP57053 126 aa12.01□□□□□ -0.49
RAB6A-207ENST00000541588 GAGE1Q13065 139 aa12.01□□□□□ -0.49
RAB6A-207ENST00000541588 GAGE4Q13068 117 aa12.01□□□□□ -0.49
RAB6A-207ENST00000541588 GAGE5Q13069 117 aa12.01□□□□□ -0.49
RAB6A-207ENST00000541588 GAGE13Q4V321 117 aa12.01□□□□□ -0.49
RAB6A-207ENST00000541588 ENKURQ8TC29 256 aa12.01□□□□□ -0.49
RAB6A-207ENST00000541588 HMCN2Q8NDA2 5059 aa12□□□□□ -0.49
RAB6A-207ENST00000541588 RPL12P30050 165 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms