RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 FAM167A-AS1Q96KT0 104 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 C11orf1Q9H5F2 150 aa8.17□□□□□ -1.1
SNHG1-216ENST00000541416 TRAV8-3A0A0A6YYJ7 113 aa8.16□□□□□ -1.1
SNHG1-216ENST00000541416 TRAV21A0A0B4J279 112 aa8.16□□□□□ -1.1
SNHG1-216ENST00000541416 LOC100131303A0A0U1RQF7 123 aa8.16□□□□□ -1.1
SNHG1-216ENST00000541416 C17orf112F2Z3M2 114 aa8.16□□□□□ -1.1
SNHG1-216ENST00000541416 BTCP35070 178 aa8.16□□□□□ -1.1
SNHG1-216ENST00000541416 ASAH1Q13510 395 aa8.16□□□□□ -1.1
SNHG1-216ENST00000541416 FAM74A1Q5RGS3 127 aa8.16□□□□□ -1.1
SNHG1-216ENST00000541416 PHYHIPLQ96FC7 376 aa8.16□□□□□ -1.1
SNHG1-216ENST00000541416 SDF2L1Q9HCN8 221 aa8.16□□□□□ -1.1
SNHG1-216ENST00000541416 COX11Q9Y6N1 276 aa8.16□□□□□ -1.1
SNHG1-216ENST00000541416 IGHV3-16A0A0C4DH30 117 aa8.15□□□□□ -1.1
SNHG1-216ENST00000541416 TRBV6-4A0A1B0GX49 114 aa8.15□□□□□ -1.1
SNHG1-216ENST00000541416 OXTP01178 125 aa8.15□□□□□ -1.1
SNHG1-216ENST00000541416 UBE2L3P68036 154 aaKnown RBP8.15□□□□□ -1.1
SNHG1-216ENST00000541416 SLC25A29Q8N8R3 303 aa8.15□□□□□ -1.1
SNHG1-216ENST00000541416 CMTM2Q8TAZ6 248 aa8.15□□□□□ -1.1
SNHG1-216ENST00000541416 THAP6Q8TBB0 222 aa8.15□□□□□ -1.1
SNHG1-216ENST00000541416 DIRC3C9JPN6 131 aa8.14□□□□□ -1.11
SNHG1-216ENST00000541416 TAS2R45P59539 299 aa8.14□□□□□ -1.11
SNHG1-216ENST00000541416 RAB32Q13637 225 aa8.14□□□□□ -1.11
SNHG1-216ENST00000541416 KHDC3LQ587J8 217 aa8.14□□□□□ -1.11
SNHG1-216ENST00000541416 OR5C1Q8NGR4 320 aa8.14□□□□□ -1.11
SNHG1-216ENST00000541416 GTSF1LQ9H1H1 148 aa8.14□□□□□ -1.11
SNHG1-216ENST00000541416 TRAV6A0A075B6T7 132 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 GNRH2O43555 120 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 TCRBP04435 133 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 SEC11BP0C7V7 166 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 IL7P13232 177 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 ACOT6Q3I5F7 207 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-216ENST00000541416 ZNF876PQ49A33 203 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 ATP6V0E2Q8NHE4 81 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 ASB13Q8WXK3 278 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 RMI2Q96E14 147 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 HYLS1Q96M11 299 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 NMES1Q9C002 83 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 PLA2G2DQ9UNK4 145 aa8.13□□□□□ -1.11
SNHG1-216ENST00000541416 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.12□□□□□ -1.11
SNHG1-216ENST00000541416 RBFOX3A6NFN3 312 aa8.12□□□□□ -1.11
SNHG1-216ENST00000541416 GGTLC3B5MD39 225 aa8.12□□□□□ -1.11
SNHG1-216ENST00000541416 LYRM1O43325 122 aa8.12□□□□□ -1.11
SNHG1-216ENST00000541416 TYMSP04818 313 aa8.12□□□□□ -1.11
SNHG1-216ENST00000541416 MGST1P10620 155 aaKnown RBP8.12□□□□□ -1.11
SNHG1-216ENST00000541416 ARL6IP6Q8N6S5 226 aa8.12□□□□□ -1.11
SNHG1-216ENST00000541416 SEC22CQ9BRL7 303 aa8.12□□□□□ -1.11
SNHG1-216ENST00000541416 NDFIP1Q9BT67 221 aa8.12□□□□□ -1.11
SNHG1-216ENST00000541416 TREM1Q9NP99 234 aa8.12□□□□□ -1.11
SNHG1-216ENST00000541416 OTORQ9NRC9 128 aa8.12□□□□□ -1.11
SNHG1-216ENST00000541416 NUDT15Q9NV35 164 aa8.12□□□□□ -1.11
SNHG1-216ENST00000541416 NHLH2Q02577 135 aa8.11□□□□□ -1.11
SNHG1-216ENST00000541416 CFAP126Q5VTH2 177 aa8.11□□□□□ -1.11
SNHG1-216ENST00000541416 SCXQ7RTU7 201 aa8.11□□□□□ -1.11
SNHG1-216ENST00000541416 Q8N976 141 aa8.11□□□□□ -1.11
SNHG1-216ENST00000541416 WDR61Q9GZS3 305 aaKnown RBP8.11□□□□□ -1.11
SNHG1-216ENST00000541416 RPH3ALQ9UNE2 315 aa8.11□□□□□ -1.11
SNHG1-216ENST00000541416 URGCP-MRPS24S4R325 110 aa8.11□□□□□ -1.11
SNHG1-216ENST00000541416 FAT3Q8TDW7 4589 aa8.11□□□□□ -1.11
SNHG1-216ENST00000541416 LRP1Q07954 4544 aaKnown RBP8.1□□□□□ -1.11
SNHG1-216ENST00000541416 A0A087WWC5 75 aa8.1□□□□□ -1.11
SNHG1-216ENST00000541416 PGPA6NDG6 321 aa8.1□□□□□ -1.11
SNHG1-216ENST00000541416 LECT2O14960 151 aa8.1□□□□□ -1.11
SNHG1-216ENST00000541416 RS1O15537 224 aa8.1□□□□□ -1.11
SNHG1-216ENST00000541416 IL15RAQ13261 267 aa8.1□□□□□ -1.11
SNHG1-216ENST00000541416 SDHCQ99643 169 aaPredicted RBP8.1□□□□□ -1.11
SNHG1-216ENST00000541416 CHAC1Q9BUX1 264 aa8.1□□□□□ -1.11
SNHG1-216ENST00000541416 H2AFB2P0C5Z0 115 aa8.09□□□□□ -1.11
SNHG1-216ENST00000541416 WFDC2Q14508 124 aa8.09□□□□□ -1.11
SNHG1-216ENST00000541416 FFAR4Q5NUL3 377 aa8.09□□□□□ -1.11
SNHG1-216ENST00000541416 GOLT1AQ6ZVE7 132 aa8.09□□□□□ -1.11
SNHG1-216ENST00000541416 TRAV8-1A0A0A6YYK1 113 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 IGHV3-73A0A0B4J1V6 119 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 SERTM2A0A1B0GWG4 89 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 F6UZH7 168 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 K7EQM0 130 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 TAAR5O14804 337 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 PLA2G10O15496 165 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 ZFP69Q49AA0 526 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 SCGB1C1Q8TD33 95 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 BAALCQ8WXS3 180 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 PTH2Q96A98 100 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 MBD2Q9UBB5 411 aa8.08□□□□□ -1.12
SNHG1-216ENST00000541416 A0A1W2PPV4 95 aa8.07□□□□□ -1.12
SNHG1-216ENST00000541416 FGF8P55075 233 aaPredicted RBP8.07□□□□□ -1.12
SNHG1-216ENST00000541416 KCNIP4Q6PIL6 250 aa8.07□□□□□ -1.12
SNHG1-216ENST00000541416 PQLC2Q6ZP29 291 aa8.07□□□□□ -1.12
SNHG1-216ENST00000541416 DAZ4Q86SG3 579 aaKnown RBP8.07□□□□□ -1.12
SNHG1-216ENST00000541416 DAZ3Q9NR90 486 aaKnown RBP8.07□□□□□ -1.12
SNHG1-216ENST00000541416 IGKV2D-24A0A075B6R9 120 aa8.06□□□□□ -1.12
SNHG1-216ENST00000541416 FAM240BA0A1B0GVZ2 78 aa8.06□□□□□ -1.12
SNHG1-216ENST00000541416 A8MWV9 139 aa8.06□□□□□ -1.12
SNHG1-216ENST00000541416 IGLV2-8P01709 118 aa8.06□□□□□ -1.12
SNHG1-216ENST00000541416 CYCSP99999 105 aaKnown RBP8.06□□□□□ -1.12
SNHG1-216ENST00000541416 ELOBQ15370 118 aa8.06□□□□□ -1.12
SNHG1-216ENST00000541416 LRRC37A5PQ49AS3 106 aa8.06□□□□□ -1.12
SNHG1-216ENST00000541416 C14orf177Q52M58 125 aa8.06□□□□□ -1.12
SNHG1-216ENST00000541416 ZFP2Q6ZN57 461 aa8.06□□□□□ -1.12
SNHG1-216ENST00000541416 RNF222A6NCQ9 220 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 GAGE12JA6NER3 117 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 GAGE1Q13065 139 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms