RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 RNF183Q96D59 192 aa11.45□□□□□ -0.58
AC005840.4-201ENST00000541242 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 TSPAN13O95857 204 aa11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 TGFAP01135 160 aa11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 LGALS1P09382 135 aaKnown RBP11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 UCNP55089 124 aa11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 OR11H12B2RN74 326 aa11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 B9A039 149 aa11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 TIMM23O14925 209 aa11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 KLRD1Q13241 179 aa11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 OR11H1Q8NG94 326 aa11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 OR11H2Q8NH07 326 aa11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 CARD19Q96LW7 228 aa11.44□□□□□ -0.58
AC005840.4-201ENST00000541242 SPRY2O43597 315 aa11.43□□□□□ -0.58
AC005840.4-201ENST00000541242 PLEKHB2Q96CS7 222 aa11.43□□□□□ -0.58
AC005840.4-201ENST00000541242 CACNA1BQ00975 2339 aa11.43□□□□□ -0.58
AC005840.4-201ENST00000541242 CACNA1AO00555 2505 aa11.43□□□□□ -0.58
AC005840.4-201ENST00000541242 CCL21O00585 134 aa11.43□□□□□ -0.58
AC005840.4-201ENST00000541242 DLX4Q92988 240 aaPredicted RBP11.43□□□□□ -0.58
AC005840.4-201ENST00000541242 FANCD2OSQ96PS1 177 aa11.43□□□□□ -0.58
AC005840.4-201ENST00000541242 HRNRQ86YZ3 2850 aaPredicted RBP11.42□□□□□ -0.58
AC005840.4-201ENST00000541242 PRSS29PA6NIE9 313 aa11.42□□□□□ -0.58
AC005840.4-201ENST00000541242 RPL7P18124 248 aaKnown RBP11.42□□□□□ -0.58
AC005840.4-201ENST00000541242 PLNP26678 52 aa11.42□□□□□ -0.58
AC005840.4-201ENST00000541242 SS18L2Q9UHA2 77 aa11.42□□□□□ -0.58
AC005840.4-201ENST00000541242 F8VRH5 84 aa11.42□□□□□ -0.58
AC005840.4-201ENST00000541242 TMEM78Q5T7P6 136 aa11.42□□□□□ -0.58
AC005840.4-201ENST00000541242 COL6A6A6NMZ7 2263 aa11.41□□□□□ -0.58
AC005840.4-201ENST00000541242 IGHV3-66A0A0C4DH42 116 aa11.41□□□□□ -0.58
AC005840.4-201ENST00000541242 MFAP4P55083 255 aa11.41□□□□□ -0.58
AC005840.4-201ENST00000541242 H7C1H1 209 aa11.41□□□□□ -0.58
AC005840.4-201ENST00000541242 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
AC005840.4-201ENST00000541242 TMEM190Q8WZ59 177 aa11.41□□□□□ -0.58
AC005840.4-201ENST00000541242 RAB1BQ9H0U4 201 aa11.41□□□□□ -0.58
AC005840.4-201ENST00000541242 IGHV3OR16-13A0A075B7E8 117 aa11.4□□□□□ -0.58
AC005840.4-201ENST00000541242 IGHV3-74A0A0B4J1X5 117 aa11.4□□□□□ -0.58
AC005840.4-201ENST00000541242 LY6HO94772 140 aa11.4□□□□□ -0.58
AC005840.4-201ENST00000541242 ADORA2A-AS1P86434 159 aa11.4□□□□□ -0.58
AC005840.4-201ENST00000541242 FBXL19-AS1Q494R0 122 aa11.4□□□□□ -0.58
AC005840.4-201ENST00000541242 KLHL30-AS1Q8NEE0 82 aa11.4□□□□□ -0.58
AC005840.4-201ENST00000541242 KIR2DL4Q99706 377 aa11.4□□□□□ -0.58
AC005840.4-201ENST00000541242 PRADC1Q9BSG0 188 aa11.4□□□□□ -0.59
AC005840.4-201ENST00000541242 ONECUT1Q9UBC0 465 aa11.4□□□□□ -0.59
AC005840.4-201ENST00000541242 RALYQ9UKM9 306 aaKnown RBP11.4□□□□□ -0.59
AC005840.4-201ENST00000541242 ZNF815PA8K554 130 aa11.39□□□□□ -0.59
AC005840.4-201ENST00000541242 SCGB1D4Q6XE38 83 aa11.39□□□□□ -0.59
AC005840.4-201ENST00000541242 ATP6V0E2Q8NHE4 81 aa11.39□□□□□ -0.59
AC005840.4-201ENST00000541242 DEFB104AQ8WTQ1 72 aa11.39□□□□□ -0.59
AC005840.4-201ENST00000541242 C21orf62Q9NYP8 219 aa11.39□□□□□ -0.59
AC005840.4-201ENST00000541242 IGLV11-55A0A075B6I3 123 aa11.38□□□□□ -0.59
AC005840.4-201ENST00000541242 IGHV7-4-1A0A0J9YVY3 117 aa11.38□□□□□ -0.59
AC005840.4-201ENST00000541242 H3BVH4 76 aa11.38□□□□□ -0.59
AC005840.4-201ENST00000541242 SRSF2Q01130 221 aaKnown RBP11.38□□□□□ -0.59
AC005840.4-201ENST00000541242 SRSF9Q13242 221 aaKnown RBP eCLIP11.38□□□□□ -0.59
AC005840.4-201ENST00000541242 HES1Q14469 280 aa11.38□□□□□ -0.59
AC005840.4-201ENST00000541242 ZNF672Q499Z4 452 aaPredicted RBP11.38□□□□□ -0.59
AC005840.4-201ENST00000541242 SCGB3A1Q96QR1 104 aa11.38□□□□□ -0.59
AC005840.4-201ENST00000541242 NBR2O15453 112 aa11.38□□□□□ -0.59
AC005840.4-201ENST00000541242 NDPQ00604 133 aa11.38□□□□□ -0.59
AC005840.4-201ENST00000541242 ERG28Q9UKR5 140 aa11.38□□□□□ -0.59
AC005840.4-201ENST00000541242 SLC25A16P16260 332 aa11.37□□□□□ -0.59
AC005840.4-201ENST00000541242 KLRB1Q12918 225 aa11.37□□□□□ -0.59
AC005840.4-201ENST00000541242 TCL1BO95988 128 aa11.37□□□□□ -0.59
AC005840.4-201ENST00000541242 SPANXN1Q5VSR9 72 aa11.37□□□□□ -0.59
AC005840.4-201ENST00000541242 CTSGP08311 255 aa11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 EMP1P54849 157 aa11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 SRSF8Q9BRL6 282 aaKnown RBP11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 AGPAT4-IT1Q9H0P7 198 aa11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 ASH1LQ9NR48 2969 aaKnown RBP11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 IGHV3-49A0A0A0MS15 119 aa11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 LINC01619G3V211 115 aa11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 LY6LH3BQJ8 138 aa11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 J3KRW8 73 aa11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 UBE2D1P51668 147 aa11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 NEXN-AS1Q8NBZ9 246 aa11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 ANAPC13Q9BS18 74 aa11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 SMIM2Q9BVW6 85 aa11.36□□□□□ -0.59
AC005840.4-201ENST00000541242 TRAV12-1A0A0B4J245 112 aa11.35□□□□□ -0.59
AC005840.4-201ENST00000541242 SHISA2Q6UWI4 295 aa11.35□□□□□ -0.59
AC005840.4-201ENST00000541242 PPDPFLQ8WWR9 84 aa11.35□□□□□ -0.59
AC005840.4-201ENST00000541242 RASL10AQ92737 203 aa11.35□□□□□ -0.59
AC005840.4-201ENST00000541242 RPL39LQ96EH5 51 aaKnown RBP11.35□□□□□ -0.59
AC005840.4-201ENST00000541242 ZFHX3Q15911 3703 aa11.35□□□□□ -0.59
AC005840.4-201ENST00000541242 UBE2D3P61077 147 aa11.35□□□□□ -0.59
AC005840.4-201ENST00000541242 UBE2D2P62837 147 aa11.35□□□□□ -0.59
AC005840.4-201ENST00000541242 ANXA2RQ3ZCQ2 193 aa11.35□□□□□ -0.59
AC005840.4-201ENST00000541242 TEN1Q86WV5 123 aa11.35□□□□□ -0.59
AC005840.4-201ENST00000541242 SPTBN1Q01082 2364 aaKnown RBP11.35□□□□□ -0.59
AC005840.4-201ENST00000541242 BAALCQ8WXS3 180 aa11.34□□□□□ -0.59
AC005840.4-201ENST00000541242 CD7P09564 240 aa11.34□□□□□ -0.59
AC005840.4-201ENST00000541242 TMEM95Q3KNT9 176 aa11.34□□□□□ -0.59
AC005840.4-201ENST00000541242 ANKRD29Q8N6D5 301 aa11.33□□□□□ -0.6
AC005840.4-201ENST00000541242 MED13LQ71F56 2210 aa11.33□□□□□ -0.6
AC005840.4-201ENST00000541242 TOMM6Q96B49 74 aa11.33□□□□□ -0.6
AC005840.4-201ENST00000541242 B5MCH6 92 aa11.32□□□□□ -0.6
AC005840.4-201ENST00000541242 COX6B1P14854 86 aa11.32□□□□□ -0.6
AC005840.4-201ENST00000541242 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.32□□□□□ -0.6
AC005840.4-201ENST00000541242 Q6ZS46 218 aa11.32□□□□□ -0.6
AC005840.4-201ENST00000541242 NDUFA11Q86Y39 141 aa11.32□□□□□ -0.6
AC005840.4-201ENST00000541242 RNF5Q99942 180 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms