RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 BBC3Q96PG8 261 aaPredicted RBP9.58□□□□□ -0.88
RNF4-222ENST00000541204 AGPAT4-IT1Q9H0P7 198 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 HIF1ANQ9NWT6 349 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 TRAV26-2A0A0B4J265 109 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 CLPSL1A2RUU4 121 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 GOSR1O95249 250 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 AVPP01185 164 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 S100A7P31151 101 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 Q6ZQT7 251 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 OR2K2Q8NGT1 345 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 EEF1AKMT3Q96AZ1 226 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 FOXC2Q99958 501 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 ZMAT4Q9H898 229 aa9.58□□□□□ -0.88
RNF4-222ENST00000541204 PTPN13Q12923 2485 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 ANKRD17O75179 2603 aaKnown RBP9.57□□□□□ -0.88
RNF4-222ENST00000541204 TMEM8BA6NDV4 472 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 MSMBP08118 114 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 BLCAPP62952 87 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 ATP5G2Q06055 141 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 Q6ZS46 218 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 GTSCR1Q86UQ5 136 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 MEGF9Q9H1U4 602 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 RBAKDNA6NC62 111 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 IGHV3-11P01762 117 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 IGKCP01834 107 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 GCSHP23434 173 aa9.57□□□□□ -0.88
RNF4-222ENST00000541204 A0A1W2PPM0 123 aa9.56□□□□□ -0.88
RNF4-222ENST00000541204 TRBV12-3P01733 135 aa9.56□□□□□ -0.88
RNF4-222ENST00000541204 IGLV2-18A0A075B6J9 118 aa9.56□□□□□ -0.88
RNF4-222ENST00000541204 TRAV8-2A0A0B4J237 113 aa9.56□□□□□ -0.88
RNF4-222ENST00000541204 RAB9AP51151 201 aa9.56□□□□□ -0.88
RNF4-222ENST00000541204 FXYD2P54710 66 aa9.56□□□□□ -0.88
RNF4-222ENST00000541204 Q8N8P6 123 aa9.56□□□□□ -0.88
RNF4-222ENST00000541204 SLC50A1Q9BRV3 221 aa9.56□□□□□ -0.88
RNF4-222ENST00000541204 UFC1Q9Y3C8 167 aa9.56□□□□□ -0.88
RNF4-222ENST00000541204 TMEM78Q5T7P6 136 aa9.55□□□□□ -0.88
RNF4-222ENST00000541204 ZC2HC1BQ5TFG8 222 aa9.55□□□□□ -0.88
RNF4-222ENST00000541204 SPCS1Q9Y6A9 102 aa9.55□□□□□ -0.88
RNF4-222ENST00000541204 IGHV7-4-1A0A0J9YVY3 117 aa9.55□□□□□ -0.88
RNF4-222ENST00000541204 NDUFS8O00217 210 aa9.55□□□□□ -0.88
RNF4-222ENST00000541204 SMIM17P0DL12 118 aa9.55□□□□□ -0.88
RNF4-222ENST00000541204 SMIM15Q7Z3B0 74 aa9.55□□□□□ -0.88
RNF4-222ENST00000541204 TMEM160Q9NX00 188 aa9.55□□□□□ -0.88
RNF4-222ENST00000541204 C8orf86Q6ZUL3 223 aa9.54□□□□□ -0.88
RNF4-222ENST00000541204 CHAC1Q9BUX1 264 aa9.54□□□□□ -0.88
RNF4-222ENST00000541204 KLK15Q9H2R5 256 aa9.54□□□□□ -0.88
RNF4-222ENST00000541204 TRBV7-1A0A0A6YYK4 115 aa9.54□□□□□ -0.88
RNF4-222ENST00000541204 K7ERJ3 54 aa9.54□□□□□ -0.88
RNF4-222ENST00000541204 DPM2O94777 84 aa9.54□□□□□ -0.88
RNF4-222ENST00000541204 SMIM13P0DJ93 91 aa9.54□□□□□ -0.88
RNF4-222ENST00000541204 METTL26Q96S19 204 aa9.54□□□□□ -0.88
RNF4-222ENST00000541204 TRBV25-1A0A075B6N4 114 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 K7EMI3 77 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 NRACQ8N912 160 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 MRPL35Q9NZE8 188 aaKnown RBP9.53□□□□□ -0.88
RNF4-222ENST00000541204 ATP5LO75964 103 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 PF4V1P10720 104 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 ARL3P36405 182 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 RIPPLY3P57055 190 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 TMEM95Q3KNT9 176 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 SAMD5Q5TGI4 173 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 UNQ9165/PRO28630Q6UXU0 137 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 CSTL1Q9H114 145 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 HIGD1BQ9P298 99 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 NAV2Q8IVL1 2488 aa9.53□□□□□ -0.88
RNF4-222ENST00000541204 IGKV3-7A0A075B6H7 116 aa9.52□□□□□ -0.88
RNF4-222ENST00000541204 FABP2P12104 132 aa9.52□□□□□ -0.88
RNF4-222ENST00000541204 LAGE3Q14657 143 aa9.52□□□□□ -0.88
RNF4-222ENST00000541204 SPANXN1Q5VSR9 72 aa9.52□□□□□ -0.88
RNF4-222ENST00000541204 J3KRW8 73 aa9.52□□□□□ -0.89
RNF4-222ENST00000541204 MYOZ3Q8TDC0 251 aa9.52□□□□□ -0.89
RNF4-222ENST00000541204 SMPXQ9UHP9 88 aa9.52□□□□□ -0.89
RNF4-222ENST00000541204 B4DSR2 109 aa9.52□□□□□ -0.89
RNF4-222ENST00000541204 G3V4G9 280 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 H3BVH4 76 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 PSMG4Q5JS54 123 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 PRR9Q5T870 116 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 OR5A1Q8NGJ0 315 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 UBR5O95071 2799 aaPredicted RBP9.51□□□□□ -0.89
RNF4-222ENST00000541204 SPRY2O43597 315 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 IGF1P05019 195 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 RPL11P62913 178 aaKnown RBP9.51□□□□□ -0.89
RNF4-222ENST00000541204 C9orf47Q6ZRZ4 202 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 NEGR1Q7Z3B1 354 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 MAPKAPK5-AS1Q8N8E1 139 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 C16orf92Q96LL3 132 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 SPOCK3Q9BQ16 436 aa9.51□□□□□ -0.89
RNF4-222ENST00000541204 NHP2Q9NX24 153 aaKnown RBP9.51□□□□□ -0.89
RNF4-222ENST00000541204 A6NDX4 124 aa9.5□□□□□ -0.89
RNF4-222ENST00000541204 DEFB1P60022 68 aa9.5□□□□□ -0.89
RNF4-222ENST00000541204 KLK9Q2XQG4 91 aa9.5□□□□□ -0.89
RNF4-222ENST00000541204 KLK9Q9UKQ9 250 aa9.5□□□□□ -0.89
RNF4-222ENST00000541204 DOPEY2Q9Y3R5 2298 aa9.5□□□□□ -0.89
RNF4-222ENST00000541204 TGFAP01135 160 aa9.5□□□□□ -0.89
RNF4-222ENST00000541204 C19orf54Q5BKX5 351 aa9.5□□□□□ -0.89
RNF4-222ENST00000541204 CEND1Q8N111 149 aa9.5□□□□□ -0.89
RNF4-222ENST00000541204 MXRA5Q9NR99 2828 aa9.49□□□□□ -0.89
RNF4-222ENST00000541204 FAM223BA6NKX1 122 aa9.49□□□□□ -0.89
RNF4-222ENST00000541204 PRSS47A8MTI9 375 aa9.49□□□□□ -0.89
RNF4-222ENST00000541204 IGHV4-59P01825 116 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms