RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 FAM3BP58499 235 aaPredicted RBP9.16□□□□□ -0.94
LTBR-208ENST00000541005 ZFP69Q49AA0 526 aa9.16□□□□□ -0.94
LTBR-208ENST00000541005 SMUG1Q53HV7 270 aa9.16□□□□□ -0.94
LTBR-208ENST00000541005 PRNTQ86SH4 94 aa9.16□□□□□ -0.94
LTBR-208ENST00000541005 Q86TA4 180 aa9.16□□□□□ -0.94
LTBR-208ENST00000541005 AKAP14Q86UN6 197 aa9.16□□□□□ -0.94
LTBR-208ENST00000541005 KCNS1Q96KK3 526 aa9.16□□□□□ -0.94
LTBR-208ENST00000541005 NAGKQ9UJ70 344 aa9.16□□□□□ -0.94
LTBR-208ENST00000541005 TRAV26-1A0A087WT03 109 aa9.15□□□□□ -0.94
LTBR-208ENST00000541005 IGHV3-16A0A0C4DH30 117 aa9.15□□□□□ -0.94
LTBR-208ENST00000541005 GCGP01275 180 aa9.15□□□□□ -0.94
LTBR-208ENST00000541005 TYMSP04818 313 aa9.15□□□□□ -0.94
LTBR-208ENST00000541005 RAB5CP51148 216 aa9.15□□□□□ -0.94
LTBR-208ENST00000541005 EIF5AL1Q6IS14 154 aaKnown RBP9.15□□□□□ -0.94
LTBR-208ENST00000541005 COX8CQ7Z4L0 72 aa9.15□□□□□ -0.94
LTBR-208ENST00000541005 SFT2D1Q8WV19 159 aa9.15□□□□□ -0.94
LTBR-208ENST00000541005 RASL10AQ92737 203 aa9.15□□□□□ -0.94
LTBR-208ENST00000541005 LINC00479Q96M42 142 aa9.15□□□□□ -0.94
LTBR-208ENST00000541005 SDF2L1Q9HCN8 221 aa9.15□□□□□ -0.94
LTBR-208ENST00000541005 MRPL16Q9NX20 251 aaKnown RBP9.15□□□□□ -0.94
LTBR-208ENST00000541005 TRAV1-1A0A0B4J248 108 aa9.14□□□□□ -0.95
LTBR-208ENST00000541005 TRAV34A0A0B4J273 112 aa9.14□□□□□ -0.95
LTBR-208ENST00000541005 TRBV6-1A0A0K0K1D8 114 aa9.14□□□□□ -0.95
LTBR-208ENST00000541005 OR5I1Q13606 314 aa9.14□□□□□ -0.95
LTBR-208ENST00000541005 UBE2DNLQ8IWF7 75 aa9.14□□□□□ -0.95
LTBR-208ENST00000541005 FMC1Q96HJ9 113 aa9.14□□□□□ -0.95
LTBR-208ENST00000541005 C11orf21Q9P2W6 132 aa9.14□□□□□ -0.95
LTBR-208ENST00000541005 M0R2P5 195 aa9.13□□□□□ -0.95
LTBR-208ENST00000541005 GNRH2O43555 120 aa9.13□□□□□ -0.95
LTBR-208ENST00000541005 PAGE4O60829 102 aa9.13□□□□□ -0.95
LTBR-208ENST00000541005 NUDT3O95989 172 aa9.13□□□□□ -0.95
LTBR-208ENST00000541005 H2AFB1P0C5Y9 115 aa9.13□□□□□ -0.95
LTBR-208ENST00000541005 CST9LP1Q5W188 147 aa9.13□□□□□ -0.95
LTBR-208ENST00000541005 SLC51BQ86UW2 128 aa9.13□□□□□ -0.95
LTBR-208ENST00000541005 VSIG2Q96IQ7 327 aa9.13□□□□□ -0.95
LTBR-208ENST00000541005 hCG_2014768A0A024R1R8 64 aa9.12□□□□□ -0.95
LTBR-208ENST00000541005 SULT1A2P50226 295 aa9.12□□□□□ -0.95
LTBR-208ENST00000541005 C9orf62Q8N4C0 152 aa9.12□□□□□ -0.95
LTBR-208ENST00000541005 ZFP30Q9Y2G7 519 aa9.12□□□□□ -0.95
LTBR-208ENST00000541005 A0A0J9YY99 117 aa9.11□□□□□ -0.95
LTBR-208ENST00000541005 LTAP01374 205 aa9.11□□□□□ -0.95
LTBR-208ENST00000541005 CCL18P55774 89 aa9.11□□□□□ -0.95
LTBR-208ENST00000541005 SLAQ13239 276 aa9.11□□□□□ -0.95
LTBR-208ENST00000541005 Q6ZR54 194 aa9.11□□□□□ -0.95
LTBR-208ENST00000541005 C9orf85Q96MD7 179 aa9.11□□□□□ -0.95
LTBR-208ENST00000541005 TRAV4A0A0B4J268 109 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 A0A1B0GV50 99 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 FABP5P3A8MUU1 101 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 AKR1C3P42330 323 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 UBE2G1P62253 170 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 FHL2Q14192 279 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 ZNRF2Q8NHG8 242 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 PTH2Q96A98 100 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 ZC2HC1AQ96GY0 325 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 MANBALQ9NQG1 85 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 PRO0255Q9UI72 69 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 LINC00588Q9Y4M8 146 aa9.1□□□□□ -0.95
LTBR-208ENST00000541005 FRAS1Q86XX4 4008 aa9.09□□□□□ -0.95
LTBR-208ENST00000541005 A0A096LPF7 62 aa9.09□□□□□ -0.95
LTBR-208ENST00000541005 IGKV3D-20A0A0C4DH25 116 aa9.09□□□□□ -0.95
LTBR-208ENST00000541005 IGHV3-53P01767 116 aa9.09□□□□□ -0.95
LTBR-208ENST00000541005 S100A9P06702 114 aaKnown RBP9.09□□□□□ -0.95
LTBR-208ENST00000541005 CRYBA4P53673 196 aa9.09□□□□□ -0.95
LTBR-208ENST00000541005 SCO2A0A1W2PP80 73 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 TEX46H3BTG2 121 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 PAX4O43316 350 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 RNASE3P12724 160 aaKnown RBP9.08□□□□□ -0.96
LTBR-208ENST00000541005 CRIP1P50238 77 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 ZNF674Q2M3X9 581 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 PIK3CD-AS1Q5SR53 167 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 DNLZQ5SXM8 178 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 FAM162BQ5T6X4 162 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 C11orf52Q96A22 123 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 ZNF479Q96JC4 524 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 TXNDC17Q9BRA2 123 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 UPK3BQ9BT76 320 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 HHLA3Q9XRX5 114 aa9.08□□□□□ -0.96
LTBR-208ENST00000541005 SH2D1AO60880 128 aa9.07□□□□□ -0.96
LTBR-208ENST00000541005 SFTA3P0C7M3 94 aa9.07□□□□□ -0.96
LTBR-208ENST00000541005 CCL20P78556 96 aa9.07□□□□□ -0.96
LTBR-208ENST00000541005 MRPS16Q9Y3D3 137 aaKnown RBP9.07□□□□□ -0.96
LTBR-208ENST00000541005 ICOSQ9Y6W8 199 aa9.07□□□□□ -0.96
LTBR-208ENST00000541005 DNAH10Q8IVF4 4471 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 IGLV2-18A0A075B6J9 118 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 TRGV4A0A0C4DH28 118 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 A0A1B0GVG6 124 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 KRBOX1C9JBD0 128 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 CIDEAO60543 219 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 ESRGQ1W209 222 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 ZNF876PQ49A33 203 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 LINC00336Q6ZUF6 198 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 OR4C5Q8NGB2 326 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 MLST8Q9BVC4 326 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 IL36BQ9NZH7 164 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 GNG13Q9P2W3 67 aa9.06□□□□□ -0.96
LTBR-208ENST00000541005 B4DEV8 164 aa9.05□□□□□ -0.96
LTBR-208ENST00000541005 M0R2N4 97 aa9.05□□□□□ -0.96
LTBR-208ENST00000541005 RS1O15537 224 aa9.05□□□□□ -0.96
LTBR-208ENST00000541005 ASIPP42127 132 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms