RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 LINC00310P59036 64 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 DEFB1P60022 68 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 PRR9Q5T870 116 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 LYZL1Q6UWQ5 148 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 TMEM256Q8N2U0 113 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 FER1L6-AS1Q8NA97 138 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 WFDC9Q8NEX5 89 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 C11orf21Q9P2W6 132 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 SNRPD3P62318 126 aaKnown RBP9.3□□□□□ -0.92
SMAD3-204ENST00000540846 PACRGQ96M98 296 aaPredicted RBP9.3□□□□□ -0.92
SMAD3-204ENST00000540846 C12orf57Q99622 126 aa9.3□□□□□ -0.92
SMAD3-204ENST00000540846 TPPP3Q9BW30 176 aa9.3□□□□□ -0.92
SMAD3-204ENST00000540846 CNFNQ9BYD5 112 aa9.3□□□□□ -0.92
SMAD3-204ENST00000540846 NOTCH3Q9UM47 2321 aa9.3□□□□□ -0.92
SMAD3-204ENST00000540846 LOC102724200A0A096LPH7 203 aaPredicted RBP9.29□□□□□ -0.92
SMAD3-204ENST00000540846 IGKV3D-20A0A0C4DH25 116 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 SERF1AO75920 110 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 ZNF493Q6ZR52 646 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 WFDC3Q8IUB2 231 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 OR10D4PQ8NGN7 298 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 ODF3Q96PU9 254 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 ALKBH7Q9BT30 221 aaPredicted RBP9.29□□□□□ -0.92
SMAD3-204ENST00000540846 TRAV2A0A0B4J234 112 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 F2Z2F3 143 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 NUPR1O60356 82 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 IGLV1-51P01701 117 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 ZNF688P0C7X2 276 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 TFPI2P48307 235 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 DEFB114Q30KQ6 69 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 PSMG4Q5JS54 123 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 BAGE3Q86Y29 109 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 C18orf32Q8TCD1 76 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 TMEM18Q96B42 140 aa9.29□□□□□ -0.92
SMAD3-204ENST00000540846 TRAV21A0A0B4J279 112 aa9.28□□□□□ -0.92
SMAD3-204ENST00000540846 A0A0J9YX75 114 aa9.28□□□□□ -0.92
SMAD3-204ENST00000540846 PAFAH1B2P68402 229 aa9.28□□□□□ -0.92
SMAD3-204ENST00000540846 TMEM61Q8N0U2 210 aa9.28□□□□□ -0.92
SMAD3-204ENST00000540846 KLLNB2CW77 178 aa9.27□□□□□ -0.93
SMAD3-204ENST00000540846 CD300EQ496F6 205 aaPredicted RBP9.27□□□□□ -0.93
SMAD3-204ENST00000540846 WIPF1O43516 503 aa9.26□□□□□ -0.93
SMAD3-204ENST00000540846 SAP30O75446 220 aa9.26□□□□□ -0.93
SMAD3-204ENST00000540846 GPX1P07203 203 aa9.26□□□□□ -0.93
SMAD3-204ENST00000540846 PYY3Q5JQD4 70 aa9.26□□□□□ -0.93
SMAD3-204ENST00000540846 Q6ZQT7 251 aa9.26□□□□□ -0.93
SMAD3-204ENST00000540846 KCNS1Q96KK3 526 aa9.26□□□□□ -0.93
SMAD3-204ENST00000540846 RCHY1Q96PM5 261 aa9.26□□□□□ -0.93
SMAD3-204ENST00000540846 CMYA5Q8N3K9 4069 aa9.26□□□□□ -0.93
SMAD3-204ENST00000540846 OR5AL1P0C617 328 aa9.25□□□□□ -0.93
SMAD3-204ENST00000540846 LEPP41159 167 aa9.25□□□□□ -0.93
SMAD3-204ENST00000540846 IQCJQ1A5X6 159 aa9.25□□□□□ -0.93
SMAD3-204ENST00000540846 PRR31Q5SQ13 230 aa9.25□□□□□ -0.93
SMAD3-204ENST00000540846 FOXI2Q6ZQN5 318 aa9.25□□□□□ -0.93
SMAD3-204ENST00000540846 DYNLRB2Q8TF09 96 aa9.25□□□□□ -0.93
SMAD3-204ENST00000540846 SORL1Q92673 2214 aa9.25□□□□□ -0.93
SMAD3-204ENST00000540846 SNAI2O43623 268 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 DUSP14O95147 198 aaKnown RBP9.24□□□□□ -0.93
SMAD3-204ENST00000540846 CD33P20138 364 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 RNASE4P34096 147 aaKnown RBP9.24□□□□□ -0.93
SMAD3-204ENST00000540846 DMRTA1Q5VZB9 504 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 EBLN2Q6P2I7 272 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 TRAV25A0A0B4J276 109 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 J3KRW8 73 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 NTF3P20783 257 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 INSL3P51460 131 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 KIR3DS1Q14943 382 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 TWIST1Q15672 202 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 DNLZQ5SXM8 178 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 C9orf66Q5T8R8 295 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 FAM104BQ5XKR9 115 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 OR2K2Q8NGT1 345 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 TMEM191AQ9H0A3 160 aa9.24□□□□□ -0.93
SMAD3-204ENST00000540846 ZNF256Q9Y2P7 627 aaPredicted RBP9.24□□□□□ -0.93
SMAD3-204ENST00000540846 IGHV4-4A0A075B6R2 117 aa9.23□□□□□ -0.93
SMAD3-204ENST00000540846 MUC21A0A0G2JKD1 596 aa9.23□□□□□ -0.93
SMAD3-204ENST00000540846 MUC21A0A140T8X8 626 aa9.23□□□□□ -0.93
SMAD3-204ENST00000540846 A8MTW9 85 aa9.23□□□□□ -0.93
SMAD3-204ENST00000540846 MED14OSP0DP75 135 aa9.23□□□□□ -0.93
SMAD3-204ENST00000540846 IGLL1P15814 213 aa9.23□□□□□ -0.93
SMAD3-204ENST00000540846 S100A12P80511 92 aa9.23□□□□□ -0.93
SMAD3-204ENST00000540846 MUC21Q5SSG8 566 aa9.23□□□□□ -0.93
SMAD3-204ENST00000540846 NAGKQ9UJ70 344 aa9.23□□□□□ -0.93
SMAD3-204ENST00000540846 U3KQK5 164 aa9.23□□□□□ -0.93
SMAD3-204ENST00000540846 NBEAL1Q6ZS30 2694 aa9.22□□□□□ -0.93
SMAD3-204ENST00000540846 C7orf71A4D174 169 aa9.22□□□□□ -0.93
SMAD3-204ENST00000540846 CACNG7P62955 275 aa9.22□□□□□ -0.93
SMAD3-204ENST00000540846 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-204ENST00000540846 ANXA2RQ3ZCQ2 193 aa9.22□□□□□ -0.93
SMAD3-204ENST00000540846 AMTNQ6UX39 209 aa9.22□□□□□ -0.93
SMAD3-204ENST00000540846 AMN1Q8IY45 258 aa9.22□□□□□ -0.93
SMAD3-204ENST00000540846 OR10AG1Q8NH19 301 aa9.22□□□□□ -0.93
SMAD3-204ENST00000540846 SPAG8Q99932 426 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-204ENST00000540846 MCRIP2Q9BUT9 160 aaKnown RBP9.22□□□□□ -0.93
SMAD3-204ENST00000540846 SAMD10Q9BYL1 202 aa9.22□□□□□ -0.93
SMAD3-204ENST00000540846 DNHD1Q96M86 4753 aa9.21□□□□□ -0.93
SMAD3-204ENST00000540846 OR4C46A6NHA9 309 aa9.21□□□□□ -0.93
SMAD3-204ENST00000540846 H3BVH4 76 aa9.21□□□□□ -0.93
SMAD3-204ENST00000540846 ZNF324O75467 553 aaPredicted RBP9.21□□□□□ -0.93
SMAD3-204ENST00000540846 HLA-DRB4P13762 266 aa9.21□□□□□ -0.93
SMAD3-204ENST00000540846 TSPOP30536 169 aa9.21□□□□□ -0.93
SMAD3-204ENST00000540846 ASIPP42127 132 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms