RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 GYPBP06028 91 aa3.01□□□□□ -1.93
PRKDC-209ENST00000540819 IGFBP7Q16270 282 aa3.01□□□□□ -1.93
PRKDC-209ENST00000540819 FP248Q71RG6 208 aaPredicted RBP3.01□□□□□ -1.93
PRKDC-209ENST00000540819 Q9H521 79 aa3.01□□□□□ -1.93
PRKDC-209ENST00000540819 TMEM242Q9NWH2 141 aa3.01□□□□□ -1.93
PRKDC-209ENST00000540819 LAMB2P55268 1798 aa3.01□□□□□ -1.93
PRKDC-209ENST00000540819 ADGRL2O95490 1459 aa3.01□□□□□ -1.93
PRKDC-209ENST00000540819 PLXNA4Q9HCM2 1894 aa3.01□□□□□ -1.93
PRKDC-209ENST00000540819 KIAA1549LQ6ZVL6 1849 aa3□□□□□ -1.93
PRKDC-209ENST00000540819 LRCOL1A6NCL2 159 aa3□□□□□ -1.93
PRKDC-209ENST00000540819 A8MU10 97 aa3□□□□□ -1.93
PRKDC-209ENST00000540819 CXCL8P10145 99 aa3□□□□□ -1.93
PRKDC-209ENST00000540819 ADCYAP1P18509 176 aa3□□□□□ -1.93
PRKDC-209ENST00000540819 RPL26P61254 145 aaKnown RBP3□□□□□ -1.93
PRKDC-209ENST00000540819 NPC2P61916 151 aa3□□□□□ -1.93
PRKDC-209ENST00000540819 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
PRKDC-209ENST00000540819 C9orf62Q8N4C0 152 aa3□□□□□ -1.93
PRKDC-209ENST00000540819 DYNLRB2Q8TF09 96 aa3□□□□□ -1.93
PRKDC-209ENST00000540819 TRAV14DV4A0A0A6YYC5 116 aa2.99□□□□□ -1.93
PRKDC-209ENST00000540819 PIPP12273 146 aaPredicted RBP2.99□□□□□ -1.93
PRKDC-209ENST00000540819 SPHKAPQ2M3C7 1700 aa2.99□□□□□ -1.93
PRKDC-209ENST00000540819 FAM24AA6NFZ4 105 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 C2orf70A6NJV1 201 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 SNCGO76070 127 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 PIRTP0C851 137 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 MIR22HGQ0VDD5 57 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 PDE6HQ13956 83 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 SPANXN1Q5VSR9 72 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 ZNF833PQ6ZTB9 187 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 Q8TAT8 98 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 ZNF431Q8TF32 576 aaPredicted RBP2.98□□□□□ -1.93
PRKDC-209ENST00000540819 TSKUQ8WUA8 353 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 SCP2D1Q9UJQ7 156 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 PLXNA2O75051 1894 aa2.98□□□□□ -1.93
PRKDC-209ENST00000540819 P0C880 135 aa2.97□□□□□ -1.93
PRKDC-209ENST00000540819 ELOBQ15370 118 aa2.97□□□□□ -1.93
PRKDC-209ENST00000540819 KRTAP13-2Q52LG2 175 aa2.97□□□□□ -1.93
PRKDC-209ENST00000540819 KRTAP26-1Q6PEX3 210 aa2.97□□□□□ -1.93
PRKDC-209ENST00000540819 ZCCHC23Q6ZST2 131 aa2.97□□□□□ -1.93
PRKDC-209ENST00000540819 CYYR1Q96J86 154 aa2.97□□□□□ -1.93
PRKDC-209ENST00000540819 DPY30Q9C005 99 aa2.97□□□□□ -1.93
PRKDC-209ENST00000540819 CASZ1Q86V15 1759 aa2.97□□□□□ -1.93
PRKDC-209ENST00000540819 MED14O60244 1454 aa2.96□□□□□ -1.93
PRKDC-209ENST00000540819 TEX14Q8IWB6 1497 aa2.96□□□□□ -1.93
PRKDC-209ENST00000540819 ANK1P16157 1881 aa2.96□□□□□ -1.93
PRKDC-209ENST00000540819 IGLV6-57P01721 117 aa2.96□□□□□ -1.94
PRKDC-209ENST00000540819 IGKV3-11P04433 115 aa2.96□□□□□ -1.94
PRKDC-209ENST00000540819 LINC00032P0C843 101 aa2.96□□□□□ -1.94
PRKDC-209ENST00000540819 UBA52P62987 128 aaKnown RBP2.96□□□□□ -1.94
PRKDC-209ENST00000540819 CLECL1Q8IZS7 167 aa2.96□□□□□ -1.94
PRKDC-209ENST00000540819 C10orf105Q8TEF2 133 aa2.96□□□□□ -1.94
PRKDC-209ENST00000540819 TIMM21Q9BVV7 248 aa2.96□□□□□ -1.94
PRKDC-209ENST00000540819 AP4S1Q9Y587 144 aa2.96□□□□□ -1.94
PRKDC-209ENST00000540819 RBBP6Q7Z6E9 1792 aaKnown RBP2.95□□□□□ -1.94
PRKDC-209ENST00000540819 PCNX2A6NKB5 2137 aa2.95□□□□□ -1.94
PRKDC-209ENST00000540819 DOCK1Q14185 1865 aa2.95□□□□□ -1.94
PRKDC-209ENST00000540819 COL16A1Q07092 1604 aaPredicted RBP2.95□□□□□ -1.94
PRKDC-209ENST00000540819 PIGBOS1A0A0B4J2F0 54 aa2.95□□□□□ -1.94
PRKDC-209ENST00000540819 PRR9Q5T870 116 aa2.95□□□□□ -1.94
PRKDC-209ENST00000540819 Q8N8P6 123 aa2.95□□□□□ -1.94
PRKDC-209ENST00000540819 C4orf3Q8WVX3 66 aa2.95□□□□□ -1.94
PRKDC-209ENST00000540819 SHANK1Q9Y566 2161 aa2.95□□□□□ -1.94
PRKDC-209ENST00000540819 BAZ1AQ9NRL2 1556 aaPredicted RBP2.95□□□□□ -1.94
PRKDC-209ENST00000540819 HEATR1Q9H583 2144 aaKnown RBP2.95□□□□□ -1.94
PRKDC-209ENST00000540819 A0A0G2JQZ4 141 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 LINC00315P59091 139 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 C4orf33Q8N1A6 199 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 LYPD1Q8N2G4 141 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 OR10AG1Q8NH19 301 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 PPDPFLQ8WWR9 84 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 TMEM141Q96I45 108 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 DSCR8Q96T75 97 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 NDUFA12Q9UI09 145 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 CCDC18Q5T9S5 1454 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 ROBO1Q9Y6N7 1651 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 MPDZO75970 2070 aa2.94□□□□□ -1.94
PRKDC-209ENST00000540819 DAPK1P53355 1430 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 ARHGAP5Q13017 1502 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 ZSWIM8A7E2V4 1837 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 COL4A5P29400 1685 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 FYCO1Q9BQS8 1478 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 H3BQ15 152 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 ATP5EP56381 51 aaPredicted RBP2.93□□□□□ -1.94
PRKDC-209ENST00000540819 DCDP81605 110 aaKnown RBP2.93□□□□□ -1.94
PRKDC-209ENST00000540819 C1orf137Q5JT78 98 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.93□□□□□ -1.94
PRKDC-209ENST00000540819 SBSPONQ8IVN8 264 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 MED12LQ86YW9 2145 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 PTPRFP10586 1907 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 ABCA3Q99758 1704 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 DCAF1Q9Y4B6 1507 aa2.93□□□□□ -1.94
PRKDC-209ENST00000540819 SSSCA1O60232 199 aa2.92□□□□□ -1.94
PRKDC-209ENST00000540819 KRTAP10-8P60410 259 aa2.92□□□□□ -1.94
PRKDC-209ENST00000540819 CNBPP62633 177 aaKnown RBP2.92□□□□□ -1.94
PRKDC-209ENST00000540819 TPRXLQ17RH7 258 aa2.92□□□□□ -1.94
PRKDC-209ENST00000540819 IQCJQ1A5X6 159 aa2.92□□□□□ -1.94
PRKDC-209ENST00000540819 Q1T7F1 81 aa2.92□□□□□ -1.94
PRKDC-209ENST00000540819 C5orf38Q86SI9 138 aa2.92□□□□□ -1.94
PRKDC-209ENST00000540819 DPH3P1Q9H4G8 78 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms