RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 PYY3Q5JQD4 70 aa6.22□□□□□ -1.41
C2CD3-215ENST00000540452 PIK3CD-AS1Q5SR53 167 aa6.22□□□□□ -1.41
C2CD3-215ENST00000540452 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
C2CD3-215ENST00000540452 TMEM256Q8N2U0 113 aa6.22□□□□□ -1.41
C2CD3-215ENST00000540452 DUX5Q96PT3 197 aa6.22□□□□□ -1.41
C2CD3-215ENST00000540452 SAMD10Q9BYL1 202 aa6.22□□□□□ -1.41
C2CD3-215ENST00000540452 SCRT2Q9NQ03 307 aa6.22□□□□□ -1.41
C2CD3-215ENST00000540452 AKAP9Q99996 3911 aa6.22□□□□□ -1.41
C2CD3-215ENST00000540452 STAB1Q9NY15 2570 aa6.21□□□□□ -1.41
C2CD3-215ENST00000540452 C7orf71A4D174 169 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 PRSS47A8MTI9 375 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 CCL24O00175 119 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 TCF21O43680 179 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 HSBP1O75506 76 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 LY6G6DO95868 133 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 PPP1R17O96001 155 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 NTF3P20783 257 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 ASIPP42127 132 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 CDKN1BP46527 198 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 SLURP1P55000 103 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 DEFB114Q30KQ6 69 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 PDZD11Q5EBL8 140 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 ADAMTSL5Q6ZMM2 481 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 Q71RC1 249 aaPredicted RBP6.21□□□□□ -1.42
C2CD3-215ENST00000540452 NDUFA11Q86Y39 141 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 DYNLRB2Q8TF09 96 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 LINC00467Q9BRT7 94 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 NDUFAF3Q9BU61 184 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 RNF114Q9Y508 228 aa6.21□□□□□ -1.42
C2CD3-215ENST00000540452 JMJD1CQ15652 2540 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 LINC01546A6NGU7 62 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 K7EMI3 77 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 ZNF688P0C7X2 276 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 LINC00614P0C842 121 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 HLA-DRB4P13762 266 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 TWIST1Q15672 202 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 KIAA1644Q3SXP7 199 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 PSMG4Q5JS54 123 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 KHDC1LQ5JSQ8 128 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 FAM159AQ6UWV7 190 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 DLX4Q92988 240 aaPredicted RBP6.2□□□□□ -1.42
C2CD3-215ENST00000540452 MRAP2Q96G30 205 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 RAX2Q96IS3 184 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 NIT2Q9NQR4 276 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 C11orf21Q9P2W6 132 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 HLA-DRB4X5D2U9 266 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 HIVEP2P31629 2446 aa6.2□□□□□ -1.42
C2CD3-215ENST00000540452 ATRQ13535 2644 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 MAP1AP78559 2803 aaPredicted RBP6.19□□□□□ -1.42
C2CD3-215ENST00000540452 LINC01549A6NIU2 74 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 M0R381 172 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 AMTP48728 403 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 PRR9Q5T870 116 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 AMTNQ6UX39 209 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 PTH2Q96A98 100 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 PRELID3AQ96N28 172 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 RCHY1Q96PM5 261 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 TPPP3Q9BW30 176 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 NXT2Q9NPJ8 142 aaKnown RBP6.19□□□□□ -1.42
C2CD3-215ENST00000540452 GSN-AS1Q9NRJ2 163 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 AP5S1Q9NUS5 200 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 TLN2Q9Y4G6 2542 aa6.19□□□□□ -1.42
C2CD3-215ENST00000540452 TRGV11A0A075B6L2 103 aa6.18□□□□□ -1.42
C2CD3-215ENST00000540452 TMSB15BA0A087X1C1 80 aa6.18□□□□□ -1.42
C2CD3-215ENST00000540452 CRXO43186 299 aaPredicted RBP6.18□□□□□ -1.42
C2CD3-215ENST00000540452 NUPR1O60356 82 aa6.18□□□□□ -1.42
C2CD3-215ENST00000540452 CD28P10747 220 aa6.18□□□□□ -1.42
C2CD3-215ENST00000540452 S100A4P26447 101 aaKnown RBP6.18□□□□□ -1.42
C2CD3-215ENST00000540452 INSL3P51460 131 aa6.18□□□□□ -1.42
C2CD3-215ENST00000540452 DEFB136Q30KP8 78 aa6.18□□□□□ -1.42
C2CD3-215ENST00000540452 MRPL51Q4U2R6 128 aaKnown RBP6.18□□□□□ -1.42
C2CD3-215ENST00000540452 SPANXN1Q5VSR9 72 aa6.18□□□□□ -1.42
C2CD3-215ENST00000540452 NIT1Q86X76 327 aa6.18□□□□□ -1.42
C2CD3-215ENST00000540452 TMEM61Q8N0U2 210 aa6.18□□□□□ -1.42
C2CD3-215ENST00000540452 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
C2CD3-215ENST00000540452 AP1S3Q96PC3 154 aa6.18□□□□□ -1.42
C2CD3-215ENST00000540452 ZNF256Q9Y2P7 627 aaPredicted RBP6.18□□□□□ -1.42
C2CD3-215ENST00000540452 IGKV3-7A0A075B6H7 116 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 TSTD3H0UI37 97 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 H3BMM0 161 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 CRLF1O75462 422 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 RNASE3P12724 160 aaKnown RBP6.17□□□□□ -1.42
C2CD3-215ENST00000540452 EDN2P20800 178 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 CKS2P33552 79 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 RNASE4P34096 147 aaKnown RBP6.17□□□□□ -1.42
C2CD3-215ENST00000540452 RPL32P62910 135 aaKnown RBP6.17□□□□□ -1.42
C2CD3-215ENST00000540452 PMCHL1Q16048 86 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 ANXA2RQ3ZCQ2 193 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 TEX43Q6ZNM6 134 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 C18orf65Q6ZTR6 163 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 WFDC3Q8IUB2 231 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 AMN1Q8IY45 258 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 OR10AG1Q8NH19 301 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 RNF185Q96GF1 192 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 C9orf85Q96MD7 179 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 CITED2Q99967 270 aaPredicted RBP6.17□□□□□ -1.42
C2CD3-215ENST00000540452 MAP1LC3AQ9H492 121 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 DPH3P1Q9H4G8 78 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 NAGKQ9UJ70 344 aa6.17□□□□□ -1.42
C2CD3-215ENST00000540452 HSPB8Q9UJY1 196 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms