RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 NDUFA13Q9P0J0 144 aa8.06□□□□□ -1.12
CBX3P4-202ENST00000540428 NAGKQ9UJ70 344 aa8.06□□□□□ -1.12
CBX3P4-202ENST00000540428 GNRH2O43555 120 aa8.05□□□□□ -1.12
CBX3P4-202ENST00000540428 SIX6O95475 246 aa8.05□□□□□ -1.12
CBX3P4-202ENST00000540428 PFN1P07737 140 aaKnown RBP8.05□□□□□ -1.12
CBX3P4-202ENST00000540428 ASAH1Q13510 395 aa8.05□□□□□ -1.12
CBX3P4-202ENST00000540428 FFAR4Q5NUL3 377 aa8.05□□□□□ -1.12
CBX3P4-202ENST00000540428 Q6ZSN1 163 aa8.05□□□□□ -1.12
CBX3P4-202ENST00000540428 NHLRC2Q8NBF2 726 aa8.05□□□□□ -1.12
CBX3P4-202ENST00000540428 KCNS1Q96KK3 526 aa8.05□□□□□ -1.12
CBX3P4-202ENST00000540428 SDF2L1Q9HCN8 221 aa8.05□□□□□ -1.12
CBX3P4-202ENST00000540428 VPS13BQ7Z7G8 4022 aa8.05□□□□□ -1.12
CBX3P4-202ENST00000540428 TRAV8-6A0A0B4J262 113 aa8.04□□□□□ -1.12
CBX3P4-202ENST00000540428 LOC100131303A0A0U1RQF7 123 aa8.04□□□□□ -1.12
CBX3P4-202ENST00000540428 PGPA6NDG6 321 aa8.04□□□□□ -1.12
CBX3P4-202ENST00000540428 C1QBP02746 253 aa8.04□□□□□ -1.12
CBX3P4-202ENST00000540428 TYMSP04818 313 aa8.04□□□□□ -1.12
CBX3P4-202ENST00000540428 Q8N814 137 aa8.04□□□□□ -1.12
CBX3P4-202ENST00000540428 HYLS1Q96M11 299 aa8.04□□□□□ -1.12
CBX3P4-202ENST00000540428 HSPB11Q9Y547 144 aa8.04□□□□□ -1.12
CBX3P4-202ENST00000540428 TRBV6-4A0A1B0GX49 114 aa8.03□□□□□ -1.12
CBX3P4-202ENST00000540428 FBLL1A6NHQ2 334 aaKnown RBP8.03□□□□□ -1.12
CBX3P4-202ENST00000540428 PQLC2Q6ZP29 291 aa8.03□□□□□ -1.12
CBX3P4-202ENST00000540428 ENKURQ8TC29 256 aa8.03□□□□□ -1.12
CBX3P4-202ENST00000540428 SCGB1C1Q8TD33 95 aa8.03□□□□□ -1.12
CBX3P4-202ENST00000540428 PPP1R1CQ8WVI7 109 aa8.03□□□□□ -1.12
CBX3P4-202ENST00000540428 PRADC1Q9BSG0 188 aa8.03□□□□□ -1.12
CBX3P4-202ENST00000540428 TREM1Q9NP99 234 aa8.03□□□□□ -1.12
CBX3P4-202ENST00000540428 MBD2Q9UBB5 411 aa8.03□□□□□ -1.12
CBX3P4-202ENST00000540428 MYCBP2O75592 4640 aa8.03□□□□□ -1.12
CBX3P4-202ENST00000540428 PET100P0DJ07 73 aa8.02□□□□□ -1.13
CBX3P4-202ENST00000540428 LAGE3Q14657 143 aa8.02□□□□□ -1.13
CBX3P4-202ENST00000540428 RHOHQ15669 191 aa8.02□□□□□ -1.13
CBX3P4-202ENST00000540428 OR10J3Q5JRS4 329 aa8.02□□□□□ -1.13
CBX3P4-202ENST00000540428 LELP1Q5T871 98 aa8.02□□□□□ -1.13
CBX3P4-202ENST00000540428 GOLT1AQ6ZVE7 132 aa8.02□□□□□ -1.13
CBX3P4-202ENST00000540428 SLC25A29Q8N8R3 303 aa8.02□□□□□ -1.13
CBX3P4-202ENST00000540428 S100ZQ8WXG8 99 aa8.02□□□□□ -1.13
CBX3P4-202ENST00000540428 ASB13Q8WXK3 278 aa8.02□□□□□ -1.13
CBX3P4-202ENST00000540428 TVP23CQ96ET8 276 aa8.02□□□□□ -1.13
CBX3P4-202ENST00000540428 RPH3ALQ9UNE2 315 aa8.02□□□□□ -1.13
CBX3P4-202ENST00000540428 SERTM2A0A1B0GWG4 89 aa8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 A0A1W2PPV4 95 aa8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 F6UZH7 168 aa8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 RS1O15537 224 aa8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 MPC2O95563 127 aa8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 ACOT6Q3I5F7 207 aaPredicted RBP8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 ZNF876PQ49A33 203 aa8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 CFAP126Q5VTH2 177 aa8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 PTH2Q96A98 100 aa8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 NDFIP1Q9BT67 221 aa8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 TM2D2Q9BX73 214 aa8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 FLG2Q5D862 2391 aaPredicted RBP8.01□□□□□ -1.13
CBX3P4-202ENST00000540428 TRAV8-1A0A0A6YYK1 113 aa8□□□□□ -1.13
CBX3P4-202ENST00000540428 MGST1P10620 155 aaKnown RBP8□□□□□ -1.13
CBX3P4-202ENST00000540428 RPL12P30050 165 aaKnown RBP8□□□□□ -1.13
CBX3P4-202ENST00000540428 H2BFSP57053 126 aa8□□□□□ -1.13
CBX3P4-202ENST00000540428 HAMPP81172 84 aa8□□□□□ -1.13
CBX3P4-202ENST00000540428 GTSF1LQ9H1H1 148 aa8□□□□□ -1.13
CBX3P4-202ENST00000540428 SH3BGRL3Q9H299 93 aa8□□□□□ -1.13
CBX3P4-202ENST00000540428 Q9HAA7 133 aa8□□□□□ -1.13
CBX3P4-202ENST00000540428 INMT-MINDY4F8WBC2 141 aa7.99□□□□□ -1.13
CBX3P4-202ENST00000540428 TAAR5O14804 337 aa7.99□□□□□ -1.13
CBX3P4-202ENST00000540428 DPPA3Q6W0C5 159 aa7.99□□□□□ -1.13
CBX3P4-202ENST00000540428 ATP6V0E2Q8NHE4 81 aa7.99□□□□□ -1.13
CBX3P4-202ENST00000540428 C9orf85Q96MD7 179 aa7.99□□□□□ -1.13
CBX3P4-202ENST00000540428 SMIM3Q9BZL3 60 aa7.99□□□□□ -1.13
CBX3P4-202ENST00000540428 FAM30AQ9NZY2 134 aa7.99□□□□□ -1.13
CBX3P4-202ENST00000540428 SRRM2Q9UQ35 2752 aaKnown RBP7.98□□□□□ -1.13
CBX3P4-202ENST00000540428 EIF3GO75821 320 aaKnown RBP eCLIP7.98□□□□□ -1.13
CBX3P4-202ENST00000540428 UPK1BO75841 260 aa7.98□□□□□ -1.13
CBX3P4-202ENST00000540428 IGHV3-30P01768 117 aa7.98□□□□□ -1.13
CBX3P4-202ENST00000540428 IGHV3-33P01772 117 aa7.98□□□□□ -1.13
CBX3P4-202ENST00000540428 PLA2G1BP04054 148 aaKnown RBP7.98□□□□□ -1.13
CBX3P4-202ENST00000540428 IGHV3-30-3P0DP02 117 aa7.98□□□□□ -1.13
CBX3P4-202ENST00000540428 IGHV3-30-5P0DP03 117 aa7.98□□□□□ -1.13
CBX3P4-202ENST00000540428 GNG5P63218 68 aa7.98□□□□□ -1.13
CBX3P4-202ENST00000540428 Q6ZSA8 131 aa7.98□□□□□ -1.13
CBX3P4-202ENST00000540428 TRAV8-3A0A0A6YYJ7 113 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 J3QL48 77 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 K7EQM0 130 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 TCRAP04437 139 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 ZNF80P51504 273 aaPredicted RBP7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 RAB2AP61019 212 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 ZNF506Q5JVG8 444 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 PIK3CD-AS1Q5SR53 167 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 C5orf17Q8NAS9 161 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 OR10G9Q8NGN4 311 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 OR10G7Q8NGN6 311 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 MARVELD1Q9BSK0 173 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 WFDC1Q9HC57 220 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 C11orf21Q9P2W6 132 aa7.97□□□□□ -1.13
CBX3P4-202ENST00000540428 IGHV3-73A0A0B4J1V6 119 aa7.96□□□□□ -1.14
CBX3P4-202ENST00000540428 PGPEP1LA6NFU8 196 aa7.96□□□□□ -1.14
CBX3P4-202ENST00000540428 GCGP01275 180 aa7.96□□□□□ -1.14
CBX3P4-202ENST00000540428 STAG3L2P0CL84 134 aa7.96□□□□□ -1.14
CBX3P4-202ENST00000540428 STAG3L3P0CL85 134 aa7.96□□□□□ -1.14
CBX3P4-202ENST00000540428 ARL14EPLP0DKL9 152 aa7.96□□□□□ -1.14
CBX3P4-202ENST00000540428 RNASE3P12724 160 aaKnown RBP7.96□□□□□ -1.14
CBX3P4-202ENST00000540428 ZFP69Q49AA0 526 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms