RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 A0A087WX48 190 aa11.78□□□□□ -0.52
GABARAPL1-208ENST00000540424 NCBP2LA6PVI3 153 aaKnown RBP11.78□□□□□ -0.52
GABARAPL1-208ENST00000540424 H3BRN7 92 aa11.78□□□□□ -0.52
GABARAPL1-208ENST00000540424 PSMB2P49721 201 aa11.78□□□□□ -0.52
GABARAPL1-208ENST00000540424 RNF125Q96EQ8 232 aa11.78□□□□□ -0.52
GABARAPL1-208ENST00000540424 ZZEF1O43149 2961 aa11.78□□□□□ -0.52
GABARAPL1-208ENST00000540424 ANKHD1Q8IWZ3 2542 aaKnown RBP11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 SMKR1H3BMG3 65 aa11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 CCDC179H3BU77 68 aa11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 UBE2D3P61077 147 aa11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 UBE2D2P62837 147 aa11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 GAGE2BQ13066 116 aa11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 GAGE2EQ4V326 116 aa11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 Q6Q795 121 aa11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 EXOC3-AS1Q8N2X6 119 aa11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 PTH2Q96A98 100 aa11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 TMEM160Q9NX00 188 aa11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 GAGE2DQ9UEU5 116 aa11.77□□□□□ -0.52
GABARAPL1-208ENST00000540424 TRAV40A0A0B4J280 105 aa11.77□□□□□ -0.53
GABARAPL1-208ENST00000540424 EBI3Q14213 229 aa11.77□□□□□ -0.53
GABARAPL1-208ENST00000540424 ZNF491Q8N8L2 437 aa11.77□□□□□ -0.53
GABARAPL1-208ENST00000540424 ADGRG4Q8IZF6 3080 aa11.77□□□□□ -0.53
GABARAPL1-208ENST00000540424 IGLV11-55A0A075B6I3 123 aa11.76□□□□□ -0.53
GABARAPL1-208ENST00000540424 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
GABARAPL1-208ENST00000540424 ASIPP42127 132 aa11.76□□□□□ -0.53
GABARAPL1-208ENST00000540424 MYMXA0A1B0GTQ4 84 aa11.76□□□□□ -0.53
GABARAPL1-208ENST00000540424 A8MWV9 139 aa11.76□□□□□ -0.53
GABARAPL1-208ENST00000540424 EPG5Q9HCE0 2579 aa11.75□□□□□ -0.53
GABARAPL1-208ENST00000540424 IFITM1P13164 125 aa11.75□□□□□ -0.53
GABARAPL1-208ENST00000540424 Q8N6K4 173 aa11.75□□□□□ -0.53
GABARAPL1-208ENST00000540424 IGFBPL1Q8WX77 278 aa11.75□□□□□ -0.53
GABARAPL1-208ENST00000540424 MRPL35Q9NZE8 188 aaKnown RBP11.75□□□□□ -0.53
GABARAPL1-208ENST00000540424 CACNA1BQ00975 2339 aa11.75□□□□□ -0.53
GABARAPL1-208ENST00000540424 EFNA4P52798 201 aa11.75□□□□□ -0.53
GABARAPL1-208ENST00000540424 TRBV20-1A0A075B6N2 111 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 PLNP26678 52 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 PDE6HQ13956 83 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 TTC32Q5I0X7 151 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 KIR2DL4Q99706 377 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 C21orf62Q9NYP8 219 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 PLXNB1O43157 2135 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 AGRNO00468 2067 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 LINC01549A6NIU2 74 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 SNCGO76070 127 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 UBE2D1P51668 147 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 FANCD2OSQ96PS1 177 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 SIRPDQ9H106 197 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 UBTD1Q9HAC8 227 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 YAE1D1Q9NRH1 226 aa11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 SMG1Q96Q15 3661 aaKnown RBP11.74□□□□□ -0.53
GABARAPL1-208ENST00000540424 LOC107984156A0A0G2JMH3 177 aa11.73□□□□□ -0.53
GABARAPL1-208ENST00000540424 M0QXV9 152 aa11.73□□□□□ -0.53
GABARAPL1-208ENST00000540424 ARL17AQ8IVW1 177 aa11.73□□□□□ -0.53
GABARAPL1-208ENST00000540424 AAMDCQ9H7C9 122 aa11.73□□□□□ -0.53
GABARAPL1-208ENST00000540424 ZFP36P26651 326 aaKnown RBP11.72□□□□□ -0.53
GABARAPL1-208ENST00000540424 SIGLEC15Q6ZMC9 328 aa11.72□□□□□ -0.53
GABARAPL1-208ENST00000540424 ZFP2Q6ZN57 461 aa11.72□□□□□ -0.53
GABARAPL1-208ENST00000540424 ANKRD29Q8N6D5 301 aa11.72□□□□□ -0.53
GABARAPL1-208ENST00000540424 RNF185Q96GF1 192 aa11.72□□□□□ -0.53
GABARAPL1-208ENST00000540424 AJUBAQ96IF1 538 aa11.72□□□□□ -0.53
GABARAPL1-208ENST00000540424 KALRNO60229 2985 aa11.72□□□□□ -0.53
GABARAPL1-208ENST00000540424 UBE2E1P51965 193 aa11.72□□□□□ -0.53
GABARAPL1-208ENST00000540424 ITPR1Q14643 2758 aa11.71□□□□□ -0.53
GABARAPL1-208ENST00000540424 LINC01548A6NM66 108 aa11.71□□□□□ -0.53
GABARAPL1-208ENST00000540424 DYNAPQ8N1N2 210 aa11.71□□□□□ -0.53
GABARAPL1-208ENST00000540424 KMT2BQ9UMN6 2715 aaPredicted RBP11.71□□□□□ -0.53
GABARAPL1-208ENST00000540424 J3KRW8 73 aa11.71□□□□□ -0.54
GABARAPL1-208ENST00000540424 MRPS12O15235 138 aaKnown RBP11.71□□□□□ -0.54
GABARAPL1-208ENST00000540424 SH2D1AO60880 128 aa11.71□□□□□ -0.54
GABARAPL1-208ENST00000540424 TNFRSF6BO95407 300 aa11.71□□□□□ -0.54
GABARAPL1-208ENST00000540424 ANXA2RQ3ZCQ2 193 aa11.71□□□□□ -0.54
GABARAPL1-208ENST00000540424 Q8N8P6 123 aa11.71□□□□□ -0.54
GABARAPL1-208ENST00000540424 MYOZ3Q8TDC0 251 aa11.71□□□□□ -0.54
GABARAPL1-208ENST00000540424 ASCL2Q99929 193 aa11.71□□□□□ -0.54
GABARAPL1-208ENST00000540424 TMSB15BA0A087X1C1 80 aa11.7□□□□□ -0.54
GABARAPL1-208ENST00000540424 RPL7P18124 248 aaKnown RBP11.7□□□□□ -0.54
GABARAPL1-208ENST00000540424 LY6DQ14210 128 aa11.7□□□□□ -0.54
GABARAPL1-208ENST00000540424 C8orf49Q96NF6 230 aa11.7□□□□□ -0.54
GABARAPL1-208ENST00000540424 TCL1BO95988 128 aa11.7□□□□□ -0.54
GABARAPL1-208ENST00000540424 LGALS1P09382 135 aaKnown RBP11.7□□□□□ -0.54
GABARAPL1-208ENST00000540424 NDPQ00604 133 aa11.7□□□□□ -0.54
GABARAPL1-208ENST00000540424 SPTA1P02549 2419 aa11.69□□□□□ -0.54
GABARAPL1-208ENST00000540424 A0A1W2PPR1 153 aa11.69□□□□□ -0.54
GABARAPL1-208ENST00000540424 VPREB3Q9UKI3 123 aa11.69□□□□□ -0.54
GABARAPL1-208ENST00000540424 IGHV7-81A0A0B4J1V7 117 aa11.69□□□□□ -0.54
GABARAPL1-208ENST00000540424 TRAV4A0A0B4J268 109 aa11.69□□□□□ -0.54
GABARAPL1-208ENST00000540424 IGLC6P0CF74 106 aa11.69□□□□□ -0.54
GABARAPL1-208ENST00000540424 COX8CQ7Z4L0 72 aa11.69□□□□□ -0.54
GABARAPL1-208ENST00000540424 Q8N9W7 124 aa11.69□□□□□ -0.54
GABARAPL1-208ENST00000540424 C17orf77Q96MU5 243 aa11.69□□□□□ -0.54
GABARAPL1-208ENST00000540424 S4R3C0 116 aa11.69□□□□□ -0.54
GABARAPL1-208ENST00000540424 IGLV2-18A0A075B6J9 118 aa11.68□□□□□ -0.54
GABARAPL1-208ENST00000540424 ITLN2Q8WWU7 325 aaPredicted RBP11.68□□□□□ -0.54
GABARAPL1-208ENST00000540424 TMEM126AQ9H061 195 aa11.68□□□□□ -0.54
GABARAPL1-208ENST00000540424 TRAV12-1A0A0B4J245 112 aa11.68□□□□□ -0.54
GABARAPL1-208ENST00000540424 F8W735 103 aaPredicted RBP11.68□□□□□ -0.54
GABARAPL1-208ENST00000540424 FAM159AQ6UWV7 190 aa11.68□□□□□ -0.54
GABARAPL1-208ENST00000540424 FAM110DQ8TAY7 271 aaPredicted RBP11.68□□□□□ -0.54
GABARAPL1-208ENST00000540424 SCGB1C2P0DMR2 95 aa11.67□□□□□ -0.54
GABARAPL1-208ENST00000540424 TMEM78Q5T7P6 136 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms