RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 DIRC3C9JPN6 131 aa8.35□□□□□ -1.07
COPS7A-211ENST00000540408 GNRH2O43555 120 aa8.35□□□□□ -1.07
COPS7A-211ENST00000540408 CIDEAO60543 219 aa8.35□□□□□ -1.07
COPS7A-211ENST00000540408 GATA1P15976 413 aaPredicted RBP8.35□□□□□ -1.07
COPS7A-211ENST00000540408 TAS2R45P59539 299 aa8.35□□□□□ -1.07
COPS7A-211ENST00000540408 UBE2L3P68036 154 aaKnown RBP8.35□□□□□ -1.07
COPS7A-211ENST00000540408 KCNS1Q96KK3 526 aa8.35□□□□□ -1.07
COPS7A-211ENST00000540408 HYLS1Q96M11 299 aa8.35□□□□□ -1.07
COPS7A-211ENST00000540408 WDR61Q9GZS3 305 aaKnown RBP8.35□□□□□ -1.07
COPS7A-211ENST00000540408 RBM38Q9H0Z9 239 aaKnown RBP8.35□□□□□ -1.07
COPS7A-211ENST00000540408 SDF2L1Q9HCN8 221 aa8.35□□□□□ -1.07
COPS7A-211ENST00000540408 IGHV3-30P01768 117 aa8.34□□□□□ -1.07
COPS7A-211ENST00000540408 IGHV3-33P01772 117 aa8.34□□□□□ -1.07
COPS7A-211ENST00000540408 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
COPS7A-211ENST00000540408 IGHV3-30-5P0DP03 117 aa8.34□□□□□ -1.07
COPS7A-211ENST00000540408 KHDC3LQ587J8 217 aa8.34□□□□□ -1.07
COPS7A-211ENST00000540408 DEFB104AQ8WTQ1 72 aa8.34□□□□□ -1.07
COPS7A-211ENST00000540408 NMES1Q9C002 83 aa8.34□□□□□ -1.07
COPS7A-211ENST00000540408 SH3BGRL3Q9H299 93 aa8.34□□□□□ -1.07
COPS7A-211ENST00000540408 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
COPS7A-211ENST00000540408 VPS13BQ7Z7G8 4022 aa8.33□□□□□ -1.08
COPS7A-211ENST00000540408 FAM240BA0A1B0GVZ2 78 aa8.33□□□□□ -1.08
COPS7A-211ENST00000540408 PGPA6NDG6 321 aa8.33□□□□□ -1.08
COPS7A-211ENST00000540408 LAGE3Q14657 143 aa8.33□□□□□ -1.08
COPS7A-211ENST00000540408 RHOHQ15669 191 aa8.33□□□□□ -1.08
COPS7A-211ENST00000540408 LELP1Q5T871 98 aa8.33□□□□□ -1.08
COPS7A-211ENST00000540408 SLC25A29Q8N8R3 303 aa8.33□□□□□ -1.08
COPS7A-211ENST00000540408 OTORQ9NRC9 128 aa8.33□□□□□ -1.08
COPS7A-211ENST00000540408 RPH3ALQ9UNE2 315 aa8.33□□□□□ -1.08
COPS7A-211ENST00000540408 TRBV6-4A0A1B0GX49 114 aa8.32□□□□□ -1.08
COPS7A-211ENST00000540408 KRTAP29-1A8MX34 341 aaPredicted RBP8.32□□□□□ -1.08
COPS7A-211ENST00000540408 TYMSP04818 313 aa8.32□□□□□ -1.08
COPS7A-211ENST00000540408 ZNF876PQ49A33 203 aa8.32□□□□□ -1.08
COPS7A-211ENST00000540408 FFAR4Q5NUL3 377 aa8.32□□□□□ -1.08
COPS7A-211ENST00000540408 ASB13Q8WXK3 278 aa8.32□□□□□ -1.08
COPS7A-211ENST00000540408 TREM1Q9NP99 234 aa8.32□□□□□ -1.08
COPS7A-211ENST00000540408 MYCBP2O75592 4640 aa8.32□□□□□ -1.08
COPS7A-211ENST00000540408 TRAV8-3A0A0A6YYJ7 113 aa8.31□□□□□ -1.08
COPS7A-211ENST00000540408 CYCSP99999 105 aaKnown RBP8.31□□□□□ -1.08
COPS7A-211ENST00000540408 LRRC37A5PQ49AS3 106 aa8.31□□□□□ -1.08
COPS7A-211ENST00000540408 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
COPS7A-211ENST00000540408 MZT2BQ6NZ67 158 aa8.31□□□□□ -1.08
COPS7A-211ENST00000540408 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
COPS7A-211ENST00000540408 ARL6IP6Q8N6S5 226 aa8.31□□□□□ -1.08
COPS7A-211ENST00000540408 ATP6V0E2Q8NHE4 81 aa8.31□□□□□ -1.08
COPS7A-211ENST00000540408 SCGB1C1Q8TD33 95 aa8.31□□□□□ -1.08
COPS7A-211ENST00000540408 NDFIP1Q9BT67 221 aa8.31□□□□□ -1.08
COPS7A-211ENST00000540408 GTSF1LQ9H1H1 148 aa8.31□□□□□ -1.08
COPS7A-211ENST00000540408 MBD2Q9UBB5 411 aa8.31□□□□□ -1.08
COPS7A-211ENST00000540408 MGST1P10620 155 aaKnown RBP8.3□□□□□ -1.08
COPS7A-211ENST00000540408 TOR2AQ5JU69 321 aa8.3□□□□□ -1.08
COPS7A-211ENST00000540408 GOLT1AQ6ZVE7 132 aa8.3□□□□□ -1.08
COPS7A-211ENST00000540408 SYT8Q8NBV8 401 aa8.3□□□□□ -1.08
COPS7A-211ENST00000540408 A0A1W2PPV4 95 aa8.29□□□□□ -1.08
COPS7A-211ENST00000540408 F6UZH7 168 aa8.29□□□□□ -1.08
COPS7A-211ENST00000540408 RS1O15537 224 aa8.29□□□□□ -1.08
COPS7A-211ENST00000540408 CFAP126Q5VTH2 177 aa8.29□□□□□ -1.08
COPS7A-211ENST00000540408 CCDC32Q9BV29 185 aa8.29□□□□□ -1.08
COPS7A-211ENST00000540408 OR5AC2Q9NZP5 309 aa8.29□□□□□ -1.08
COPS7A-211ENST00000540408 COX11Q9Y6N1 276 aa8.29□□□□□ -1.08
COPS7A-211ENST00000540408 IGHV3-73A0A0B4J1V6 119 aa8.28□□□□□ -1.08
COPS7A-211ENST00000540408 GGTLC3B5MD39 225 aa8.28□□□□□ -1.08
COPS7A-211ENST00000540408 TAAR5O14804 337 aa8.28□□□□□ -1.08
COPS7A-211ENST00000540408 SIX6O95475 246 aa8.28□□□□□ -1.08
COPS7A-211ENST00000540408 PQLC2Q6ZP29 291 aa8.28□□□□□ -1.08
COPS7A-211ENST00000540408 Q6ZSA8 131 aa8.28□□□□□ -1.08
COPS7A-211ENST00000540408 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.27□□□□□ -1.09
COPS7A-211ENST00000540408 TRAV8-1A0A0A6YYK1 113 aa8.27□□□□□ -1.09
COPS7A-211ENST00000540408 SERTM2A0A1B0GWG4 89 aa8.27□□□□□ -1.09
COPS7A-211ENST00000540408 K7EQM0 130 aa8.27□□□□□ -1.09
COPS7A-211ENST00000540408 ACOT6Q3I5F7 207 aaPredicted RBP8.27□□□□□ -1.09
COPS7A-211ENST00000540408 RMI2Q96E14 147 aa8.27□□□□□ -1.09
COPS7A-211ENST00000540408 TVP23CQ96ET8 276 aa8.27□□□□□ -1.09
COPS7A-211ENST00000540408 A0A087WWC5 75 aa8.26□□□□□ -1.09
COPS7A-211ENST00000540408 RBFOX3A6NFN3 312 aa8.26□□□□□ -1.09
COPS7A-211ENST00000540408 H0YIZ8 118 aa8.26□□□□□ -1.09
COPS7A-211ENST00000540408 LECT2O14960 151 aa8.26□□□□□ -1.09
COPS7A-211ENST00000540408 SEC11BP0C7V7 166 aa8.26□□□□□ -1.09
COPS7A-211ENST00000540408 PET100P0DJ07 73 aa8.26□□□□□ -1.09
COPS7A-211ENST00000540408 ASAH1Q13510 395 aa8.26□□□□□ -1.09
COPS7A-211ENST00000540408 ZFP69Q49AA0 526 aa8.26□□□□□ -1.09
COPS7A-211ENST00000540408 Q8N976 141 aa8.26□□□□□ -1.09
COPS7A-211ENST00000540408 PTH2Q96A98 100 aa8.26□□□□□ -1.09
COPS7A-211ENST00000540408 URGCP-MRPS24S4R325 110 aa8.26□□□□□ -1.09
COPS7A-211ENST00000540408 WFDC2Q14508 124 aa8.25□□□□□ -1.09
COPS7A-211ENST00000540408 ZNF506Q5JVG8 444 aa8.25□□□□□ -1.09
COPS7A-211ENST00000540408 DPPA3Q6W0C5 159 aa8.25□□□□□ -1.09
COPS7A-211ENST00000540408 ENKURQ8TC29 256 aa8.25□□□□□ -1.09
COPS7A-211ENST00000540408 PPP1R1CQ8WVI7 109 aa8.25□□□□□ -1.09
COPS7A-211ENST00000540408 HSPB11Q9Y547 144 aa8.25□□□□□ -1.09
COPS7A-211ENST00000540408 GAGE12JA6NER3 117 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 PGPEP1LA6NFU8 196 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 A8MWV9 139 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 EIF3GO75821 320 aaKnown RBP eCLIP8.24□□□□□ -1.09
COPS7A-211ENST00000540408 GCGP01275 180 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 FGF8P55075 233 aaPredicted RBP8.24□□□□□ -1.09
COPS7A-211ENST00000540408 GNG5P63218 68 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 GAGE1Q13065 139 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 GAGE4Q13068 117 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 GAGE5Q13069 117 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 252.6 ms