RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 A0A1W2PRX2 142 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 TMEM262E9PQX1 116 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 M0R1W7 72 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 OVOL1O14753 267 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 FSTL3O95633 263 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 PLNP26678 52 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 ZNF491Q8N8L2 437 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 BPESC1Q9GZL8 116 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 NAV2Q8IVL1 2488 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 C9orf118A6NHY6 69 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 ATP6V0E1O15342 81 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 NEGR1Q7Z3B1 354 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 MRPL36Q9P0J6 103 aaKnown RBP7.85□□□□□ -1.15
TRAF1-202ENST00000540010 KALRNO60229 2985 aa7.85□□□□□ -1.15
TRAF1-202ENST00000540010 PRSS46E5RG02 174 aa7.84□□□□□ -1.15
TRAF1-202ENST00000540010 OVOL3O00110 214 aa7.84□□□□□ -1.15
TRAF1-202ENST00000540010 GATA1P15976 413 aaPredicted RBP7.84□□□□□ -1.15
TRAF1-202ENST00000540010 ANAPC13Q9BS18 74 aa7.84□□□□□ -1.15
TRAF1-202ENST00000540010 ARHGAP32A7KAX9 2087 aa7.84□□□□□ -1.15
TRAF1-202ENST00000540010 H3BRM9 83 aa7.84□□□□□ -1.15
TRAF1-202ENST00000540010 IGLV2-23P01705 113 aa7.84□□□□□ -1.15
TRAF1-202ENST00000540010 C9orf139Q6ZV77 190 aa7.84□□□□□ -1.15
TRAF1-202ENST00000540010 C10orf126Q8N4M7 172 aa7.84□□□□□ -1.15
TRAF1-202ENST00000540010 H3BMG7 143 aa7.84□□□□□ -1.16
TRAF1-202ENST00000540010 C2orf66Q6UXQ4 117 aa7.84□□□□□ -1.16
TRAF1-202ENST00000540010 FAM167A-AS1Q96KT0 104 aa7.84□□□□□ -1.16
TRAF1-202ENST00000540010 RHPN1-AS1Q9BWJ2 59 aa7.84□□□□□ -1.16
TRAF1-202ENST00000540010 TTTY13Q9BZ97 58 aa7.84□□□□□ -1.16
TRAF1-202ENST00000540010 PRB1P04280 392 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 THAP8Q8NA92 274 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 DLX4Q92988 240 aaPredicted RBP7.83□□□□□ -1.16
TRAF1-202ENST00000540010 K7EMI3 77 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 LTAP01374 205 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 MINOS1Q5TGZ0 78 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 LY6G5BQ8NDX9 201 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 SPXQ9BT56 116 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 MSRB1Q9NZV6 116 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 MOB4Q9Y3A3 225 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 MINOS1-NBL1R4GNA1 71 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 NDUFS8O00217 210 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 SLC25A16P16260 332 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 CKS1BP61024 79 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 LGALS9BQ3B8N2 356 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 ANKRD39Q53RE8 183 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 SP5Q6BEB4 398 aaPredicted RBP7.83□□□□□ -1.16
TRAF1-202ENST00000540010 LGALS9CQ6DKI2 356 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 Q8N7P7 452 aa7.83□□□□□ -1.16
TRAF1-202ENST00000540010 TSSC4Q9Y5U2 329 aaPredicted RBP7.83□□□□□ -1.16
TRAF1-202ENST00000540010 LINC01549A6NIU2 74 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 EGR2P11161 476 aaPredicted RBP7.82□□□□□ -1.16
TRAF1-202ENST00000540010 GTSF1Q8WW33 167 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 LINC00477Q96M19 166 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 BSNQ9UPA5 3926 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 TRGV2A0A075B6R0 118 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 TRBV7-9A0A0J9YWB2 115 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 TET2Q6N021 2002 aaPredicted RBP7.82□□□□□ -1.16
TRAF1-202ENST00000540010 KNCNA6PVL3 124 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 H3BRN7 92 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 VCYO14598 125 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 DOPEY1Q5JWR5 2465 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 IGKV1-17P01599 117 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 ZFP36P26651 326 aaKnown RBP7.82□□□□□ -1.16
TRAF1-202ENST00000540010 LINC01559Q495D7 138 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 RUSC1-AS1Q66K80 236 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 OR11H6Q8NGC7 330 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 TP73-AS1Q9UF72 201 aa7.82□□□□□ -1.16
TRAF1-202ENST00000540010 RELNP78509 3460 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 OOSP1A8MZH6 123 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 GAGE2BQ13066 116 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 GAGE2EQ4V326 116 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 DEFB125Q8N687 156 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 SPOCK3Q9BQ16 436 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 GAGE2DQ9UEU5 116 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 ZFYVE26Q68DK2 2539 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 TRBV7-1A0A0A6YYK4 115 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 C9JAW5 83 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 WIPF2Q8TF74 440 aaPredicted RBP7.81□□□□□ -1.16
TRAF1-202ENST00000540010 ZNF625Q96I27 306 aaPredicted RBP7.81□□□□□ -1.16
TRAF1-202ENST00000540010 LRBAP50851 2863 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 SAP30O75446 220 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 TMEM14CQ9P0S9 112 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 TP53TG1Q9Y2A0 90 aa7.81□□□□□ -1.16
TRAF1-202ENST00000540010 A0A1W2PPM0 123 aa7.8□□□□□ -1.16
TRAF1-202ENST00000540010 SPINK8P0C7L1 97 aa7.8□□□□□ -1.16
TRAF1-202ENST00000540010 KLF5Q13887 457 aaPredicted RBP7.8□□□□□ -1.16
TRAF1-202ENST00000540010 C8orf86Q6ZUL3 223 aa7.8□□□□□ -1.16
TRAF1-202ENST00000540010 Q8N8P6 123 aa7.8□□□□□ -1.16
TRAF1-202ENST00000540010 IGF2BP2-AS1Q96M15 143 aa7.8□□□□□ -1.16
TRAF1-202ENST00000540010 YPEL4Q96NS1 127 aa7.8□□□□□ -1.16
TRAF1-202ENST00000540010 HIVEP2P31629 2446 aa7.8□□□□□ -1.16
TRAF1-202ENST00000540010 IGHV2-70DA0A0C4DH43 119 aa7.8□□□□□ -1.16
TRAF1-202ENST00000540010 PHLDA1Q8WV24 401 aaPredicted RBP7.8□□□□□ -1.16
TRAF1-202ENST00000540010 ZNF503Q96F45 646 aa7.8□□□□□ -1.16
TRAF1-202ENST00000540010 TMEM101Q96IK0 257 aa7.8□□□□□ -1.16
TRAF1-202ENST00000540010 K7EP34 96 aa7.79□□□□□ -1.16
TRAF1-202ENST00000540010 M0R2P5 195 aa7.79□□□□□ -1.16
TRAF1-202ENST00000540010 DYNAPQ8N1N2 210 aa7.79□□□□□ -1.16
TRAF1-202ENST00000540010 SRSF8Q9BRL6 282 aaKnown RBP7.79□□□□□ -1.16
TRAF1-202ENST00000540010 GP9P14770 177 aa7.79□□□□□ -1.16
TRAF1-202ENST00000540010 PRADC1Q9BSG0 188 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms