RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 MSRB1Q9NZV6 116 aa10.45□□□□□ -0.74
UBE3B-211ENST00000539843 ZFP69Q49AA0 526 aa10.44□□□□□ -0.74
UBE3B-211ENST00000539843 Q6ZRN7 208 aaPredicted RBP10.44□□□□□ -0.74
UBE3B-211ENST00000539843 OR10G9Q8NGN4 311 aa10.44□□□□□ -0.74
UBE3B-211ENST00000539843 OR10G7Q8NGN6 311 aa10.44□□□□□ -0.74
UBE3B-211ENST00000539843 CIDEAO60543 219 aa10.43□□□□□ -0.74
UBE3B-211ENST00000539843 ASB13Q8WXK3 278 aa10.43□□□□□ -0.74
UBE3B-211ENST00000539843 LRP1BQ9NZR2 4599 aa10.43□□□□□ -0.74
UBE3B-211ENST00000539843 F6UZH7 168 aa10.42□□□□□ -0.74
UBE3B-211ENST00000539843 PSCAO43653 123 aa10.42□□□□□ -0.74
UBE3B-211ENST00000539843 CRYGDP07320 174 aa10.42□□□□□ -0.74
UBE3B-211ENST00000539843 CDC34P49427 236 aaPredicted RBP10.42□□□□□ -0.74
UBE3B-211ENST00000539843 RAB2AP61019 212 aa10.42□□□□□ -0.74
UBE3B-211ENST00000539843 PRADC1Q9BSG0 188 aa10.42□□□□□ -0.74
UBE3B-211ENST00000539843 A0A087WTM6 91 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 TRAV8-6A0A0B4J262 113 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 IGHV3-16A0A0C4DH30 117 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 FBLL1A6NHQ2 334 aaKnown RBP10.41□□□□□ -0.74
UBE3B-211ENST00000539843 EPM2AB3EWF7 344 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 MBP02144 154 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 TYMSP04818 313 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 PFN1P07737 140 aaKnown RBP10.41□□□□□ -0.74
UBE3B-211ENST00000539843 DNAH10OSP0CZ25 163 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 IFITM3Q01628 133 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 WFDC10BQ8IUB3 73 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 C5orf17Q8NAS9 161 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 SH3BGRL3Q9H299 93 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 HSPG2P98160 4391 aa10.41□□□□□ -0.74
UBE3B-211ENST00000539843 TAAR5O14804 337 aa10.4□□□□□ -0.74
UBE3B-211ENST00000539843 GNRH2O43555 120 aa10.4□□□□□ -0.74
UBE3B-211ENST00000539843 ARL14EPLP0DKL9 152 aa10.4□□□□□ -0.74
UBE3B-211ENST00000539843 RHOHQ15669 191 aa10.4□□□□□ -0.74
UBE3B-211ENST00000539843 ABCA13Q86UQ4 5058 aa10.4□□□□□ -0.75
UBE3B-211ENST00000539843 TRAV8-1A0A0A6YYK1 113 aa10.39□□□□□ -0.75
UBE3B-211ENST00000539843 IGHV3-38A0A0C4DH36 116 aa10.39□□□□□ -0.75
UBE3B-211ENST00000539843 HMGB3O15347 200 aaKnown RBP10.39□□□□□ -0.75
UBE3B-211ENST00000539843 EIF3GO75821 320 aaKnown RBP eCLIP10.39□□□□□ -0.75
UBE3B-211ENST00000539843 TIRAPP58753 221 aa10.39□□□□□ -0.75
UBE3B-211ENST00000539843 GNG5P63218 68 aa10.39□□□□□ -0.75
UBE3B-211ENST00000539843 ZNF876PQ49A33 203 aa10.39□□□□□ -0.75
UBE3B-211ENST00000539843 HSD17B11Q8NBQ5 300 aa10.39□□□□□ -0.75
UBE3B-211ENST00000539843 TMEM167BQ9NRX6 74 aa10.39□□□□□ -0.75
UBE3B-211ENST00000539843 TNFRSF18Q9Y5U5 241 aa10.39□□□□□ -0.75
UBE3B-211ENST00000539843 GATA1P15976 413 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-211ENST00000539843 OR10J3Q5JRS4 329 aa10.38□□□□□ -0.75
UBE3B-211ENST00000539843 OR2G3Q8NGZ4 309 aa10.38□□□□□ -0.75
UBE3B-211ENST00000539843 FRZBQ92765 325 aa10.38□□□□□ -0.75
UBE3B-211ENST00000539843 PSMG3Q9BT73 122 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-211ENST00000539843 WFDC1Q9HC57 220 aa10.38□□□□□ -0.75
UBE3B-211ENST00000539843 DNAH5Q8TE73 4624 aa10.37□□□□□ -0.75
UBE3B-211ENST00000539843 TCRAP04437 139 aa10.37□□□□□ -0.75
UBE3B-211ENST00000539843 STAG3L2P0CL84 134 aa10.37□□□□□ -0.75
UBE3B-211ENST00000539843 STAG3L3P0CL85 134 aa10.37□□□□□ -0.75
UBE3B-211ENST00000539843 SERF2P84101 59 aa10.37□□□□□ -0.75
UBE3B-211ENST00000539843 SMUG1Q53HV7 270 aa10.37□□□□□ -0.75
UBE3B-211ENST00000539843 TRBV6-4A0A1B0GX49 114 aa10.36□□□□□ -0.75
UBE3B-211ENST00000539843 A6NHS1 94 aa10.36□□□□□ -0.75
UBE3B-211ENST00000539843 CXorf1O96002 111 aa10.36□□□□□ -0.75
UBE3B-211ENST00000539843 GCGP01275 180 aa10.36□□□□□ -0.75
UBE3B-211ENST00000539843 SAPCD1Q5SSQ6 148 aa10.36□□□□□ -0.75
UBE3B-211ENST00000539843 SGK494Q96LW2 274 aa10.36□□□□□ -0.75
UBE3B-211ENST00000539843 ACTR3CQ9C0K3 210 aaPredicted RBP10.36□□□□□ -0.75
UBE3B-211ENST00000539843 PSG8Q9UQ74 426 aa10.36□□□□□ -0.75
UBE3B-211ENST00000539843 MGST1P10620 155 aaKnown RBP10.35□□□□□ -0.75
UBE3B-211ENST00000539843 GCSHP23434 173 aa10.35□□□□□ -0.75
UBE3B-211ENST00000539843 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
UBE3B-211ENST00000539843 GCHFRP30047 84 aa10.35□□□□□ -0.75
UBE3B-211ENST00000539843 FLI1Q01543 452 aaPredicted RBP10.35□□□□□ -0.75
UBE3B-211ENST00000539843 LINC01556Q5JQF7 62 aa10.35□□□□□ -0.75
UBE3B-211ENST00000539843 PRNTQ86SH4 94 aa10.35□□□□□ -0.75
UBE3B-211ENST00000539843 CYB561D1Q8N8Q1 229 aa10.35□□□□□ -0.75
UBE3B-211ENST00000539843 TMEM75Q8N9X5 138 aa10.35□□□□□ -0.75
UBE3B-211ENST00000539843 INO80EQ8NBZ0 244 aaPredicted RBP10.35□□□□□ -0.75
UBE3B-211ENST00000539843 NTN5Q8WTR8 489 aaPredicted RBP10.35□□□□□ -0.75
UBE3B-211ENST00000539843 RAB24Q969Q5 203 aa10.35□□□□□ -0.75
UBE3B-211ENST00000539843 TVP23CQ96ET8 276 aa10.35□□□□□ -0.75
UBE3B-211ENST00000539843 MED28Q9H204 178 aa10.35□□□□□ -0.75
UBE3B-211ENST00000539843 IGLV5-52A0A0A0MRZ9 124 aa10.34□□□□□ -0.75
UBE3B-211ENST00000539843 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
UBE3B-211ENST00000539843 RS1O15537 224 aa10.34□□□□□ -0.75
UBE3B-211ENST00000539843 SUMO1P63165 101 aaKnown RBP10.34□□□□□ -0.75
UBE3B-211ENST00000539843 CFAP126Q5VTH2 177 aa10.34□□□□□ -0.75
UBE3B-211ENST00000539843 SLC25A29Q8N8R3 303 aa10.34□□□□□ -0.75
UBE3B-211ENST00000539843 AQP10Q96PS8 301 aa10.34□□□□□ -0.75
UBE3B-211ENST00000539843 EPDR1Q9UM22 224 aa10.34□□□□□ -0.75
UBE3B-211ENST00000539843 TNFSF18Q9UNG2 199 aa10.34□□□□□ -0.75
UBE3B-211ENST00000539843 ALG5Q9Y673 324 aa10.34□□□□□ -0.75
UBE3B-211ENST00000539843 BORCS7-ASMTA0A0B4J1R7 106 aa10.33□□□□□ -0.76
UBE3B-211ENST00000539843 ATP6V0CP27449 155 aa10.33□□□□□ -0.76
UBE3B-211ENST00000539843 LELP1Q5T871 98 aa10.33□□□□□ -0.76
UBE3B-211ENST00000539843 PTH2Q96A98 100 aa10.33□□□□□ -0.76
UBE3B-211ENST00000539843 TM2D2Q9BX73 214 aa10.33□□□□□ -0.76
UBE3B-211ENST00000539843 IGHV3-73A0A0B4J1V6 119 aa10.32□□□□□ -0.76
UBE3B-211ENST00000539843 A8MWV9 139 aa10.32□□□□□ -0.76
UBE3B-211ENST00000539843 IFNA7P01567 189 aa10.32□□□□□ -0.76
UBE3B-211ENST00000539843 INAFM2P0DMQ5 153 aa10.32□□□□□ -0.76
UBE3B-211ENST00000539843 FUSP35637 526 aaKnown RBP eCLIP10.32□□□□□ -0.76
UBE3B-211ENST00000539843 ATP6V0E2Q8NHE4 81 aa10.32□□□□□ -0.76
UBE3B-211ENST00000539843 SUN5Q8TC36 379 aa10.32□□□□□ -0.76
UBE3B-211ENST00000539843 C9orf85Q96MD7 179 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms