RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 ZNF705EA8MWA4 302 aaPredicted RBP3.6□□□□□ -1.83
SSPN-206ENST00000539019 C17orf112F2Z3M2 114 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 HMGB3O15347 200 aaKnown RBP3.6□□□□□ -1.83
SSPN-206ENST00000539019 SCGB2A1O75556 95 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 CDK2AP2O75956 126 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 OR10J4P0C629 311 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 ARL14EPLP0DKL9 152 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 CT45A10P0DMU9 189 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 GCHFRP30047 84 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 GALR1P47211 349 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 ZNF415Q09FC8 603 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 PSMG4Q5JS54 123 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 LCN15Q6UWW0 184 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 ZNF705AQ6ZN79 300 aaPredicted RBP3.6□□□□□ -1.83
SSPN-206ENST00000539019 FOXI2Q6ZQN5 318 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 Q6ZQT7 251 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 SLC51BQ86UW2 128 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 KIR2DL5AQ8N109 375 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 C1orf158Q8N1D5 194 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 EXOC3-AS1Q8N2X6 119 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 ZFAND2AQ8N6M9 145 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 KIR2DL5BQ8NHK3 375 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 MRAPQ8TCY5 172 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 SCGB1C1Q8TD33 95 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 MRPL53Q96EL3 112 aaKnown RBP3.6□□□□□ -1.83
SSPN-206ENST00000539019 OVOL2Q9BRP0 275 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 PAXXQ9BUH6 204 aa3.6□□□□□ -1.83
SSPN-206ENST00000539019 ZMAT5Q9UDW3 170 aaKnown RBP3.6□□□□□ -1.83
SSPN-206ENST00000539019 BORCS7-ASMTA0A0B4J1R7 106 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 CTXND1A0A1B0GTU2 59 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 KLLNB2CW77 178 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 MBP02144 154 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 ZNF705DP0CH99 300 aaPredicted RBP3.59□□□□□ -1.83
SSPN-206ENST00000539019 ZNF705BP0CI00 300 aaPredicted RBP3.59□□□□□ -1.83
SSPN-206ENST00000539019 DNAH10OSP0CZ25 163 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 TPT1P13693 172 aaKnown RBP3.59□□□□□ -1.83
SSPN-206ENST00000539019 BMI1P35226 326 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 CDC34P49427 236 aaPredicted RBP3.59□□□□□ -1.83
SSPN-206ENST00000539019 MEOX2P50222 304 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 CNN1P51911 297 aaKnown RBP3.59□□□□□ -1.83
SSPN-206ENST00000539019 RHOBP62745 196 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 GUK1Q16774 197 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 ACOT6Q3I5F7 207 aaPredicted RBP3.59□□□□□ -1.83
SSPN-206ENST00000539019 FAM74A1Q5RGS3 127 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 PRR9Q5T870 116 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 COX8CQ7Z4L0 72 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 LYPD1Q8N2G4 141 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 ARL6IP6Q8N6S5 226 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 OR8A1Q8NGG7 326 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 SLC50A1Q9BRV3 221 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 ZNF471Q9BX82 626 aaPredicted RBP3.59□□□□□ -1.83
SSPN-206ENST00000539019 AGPAT4-IT1Q9H0P7 198 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 SLC35B3Q9H1N7 401 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 RETNQ9HD89 108 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 KCNIP2Q9NS61 270 aa3.59□□□□□ -1.83
SSPN-206ENST00000539019 LOC102724200A0A096LPH7 203 aaPredicted RBP3.58□□□□□ -1.84
SSPN-206ENST00000539019 KANTRA0A1W2PQU2 76 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 FAM74A7A6NL05 159 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 UMAD1C9J7I0 102 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 ZNF324O75467 553 aaPredicted RBP3.58□□□□□ -1.84
SSPN-206ENST00000539019 IFNA7P01567 189 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 PRM2P04554 102 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 CRISP2P16562 243 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 FGF8P55075 233 aaPredicted RBP3.58□□□□□ -1.84
SSPN-206ENST00000539019 CMC4P56277 68 aaPredicted RBP3.58□□□□□ -1.84
SSPN-206ENST00000539019 PAFAH1B2P68402 229 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 KHDC3LQ587J8 217 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 ACTL10Q5JWF8 245 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 SAMD13Q5VXD3 122 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 DPPA3Q6W0C5 159 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 SLC7A5P1Q8MH63 180 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 Q8NAQ8 132 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 RPUSD4Q96CM3 377 aaKnown RBP3.58□□□□□ -1.84
SSPN-206ENST00000539019 ODF3Q96PU9 254 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 ACTR3CQ9C0K3 210 aaPredicted RBP3.58□□□□□ -1.84
SSPN-206ENST00000539019 Q9H3A6 140 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 TP53TG1Q9Y2A0 90 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 KLF12Q9Y4X4 402 aa3.58□□□□□ -1.84
SSPN-206ENST00000539019 DYNC1H1Q14204 4646 aaKnown RBP3.57□□□□□ -1.84
SSPN-206ENST00000539019 IGKV2-40A0A087WW87 121 aaPredicted RBP3.57□□□□□ -1.84
SSPN-206ENST00000539019 TRAV8-1A0A0A6YYK1 113 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 TRBV7-9A0A0J9YWB2 115 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 A0A1W2PRE2 83 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 RBAKDNA6NC62 111 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 MAP1LC3B2A6NCE7 125 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 A8MU10 97 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 DNASE2O00115 360 aaPredicted RBP3.57□□□□□ -1.84
SSPN-206ENST00000539019 UBE2CO00762 179 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 CXorf1O96002 111 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 IGKV2D-40P01614 121 aaPredicted RBP3.57□□□□□ -1.84
SSPN-206ENST00000539019 SLC25A5P05141 298 aaKnown RBP3.57□□□□□ -1.84
SSPN-206ENST00000539019 NMBP08949 121 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 RPL35AP18077 110 aaKnown RBP3.57□□□□□ -1.84
SSPN-206ENST00000539019 CRIP1P50238 77 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 SNRPD3P62318 126 aaKnown RBP3.57□□□□□ -1.84
SSPN-206ENST00000539019 RANP62826 216 aaKnown RBP3.57□□□□□ -1.84
SSPN-206ENST00000539019 UBE2L3P68036 154 aaKnown RBP3.57□□□□□ -1.84
SSPN-206ENST00000539019 ERCC8Q13216 396 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 TEX261Q6UWH6 196 aa3.57□□□□□ -1.84
SSPN-206ENST00000539019 Q6ZR54 194 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms