RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 F6UZH7 168 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 M0R2P5 195 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 GNRH2O43555 120 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 TYMSP04818 313 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 KRTAP10-1P60331 282 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 FAM74A1Q5RGS3 127 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 GOLT1AQ6ZVE7 132 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 OR4C5Q8NGB2 326 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 TVP23CQ96ET8 276 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 MBD2Q9UBB5 411 aa8.45□□□□□ -1.06
VAMP1-206ENST00000538970 TRAV8-1A0A0A6YYK1 113 aa8.44□□□□□ -1.06
VAMP1-206ENST00000538970 SSNA1O43805 119 aa8.44□□□□□ -1.06
VAMP1-206ENST00000538970 PQLC2Q6ZP29 291 aa8.44□□□□□ -1.06
VAMP1-206ENST00000538970 ARL6IP6Q8N6S5 226 aa8.44□□□□□ -1.06
VAMP1-206ENST00000538970 WFDC1Q9HC57 220 aa8.44□□□□□ -1.06
VAMP1-206ENST00000538970 FAT1Q14517 4588 aa8.44□□□□□ -1.06
VAMP1-206ENST00000538970 CRYGDP07320 174 aa8.43□□□□□ -1.06
VAMP1-206ENST00000538970 GATA1P15976 413 aaPredicted RBP8.43□□□□□ -1.06
VAMP1-206ENST00000538970 TIRAPP58753 221 aa8.43□□□□□ -1.06
VAMP1-206ENST00000538970 RAB2AP61019 212 aa8.43□□□□□ -1.06
VAMP1-206ENST00000538970 GNG5P63218 68 aa8.43□□□□□ -1.06
VAMP1-206ENST00000538970 ACOT6Q3I5F7 207 aaPredicted RBP8.43□□□□□ -1.06
VAMP1-206ENST00000538970 SH2D6Q7Z4S9 175 aa8.43□□□□□ -1.06
VAMP1-206ENST00000538970 C10orf126Q8N4M7 172 aa8.43□□□□□ -1.06
VAMP1-206ENST00000538970 SDF2L1Q9HCN8 221 aa8.43□□□□□ -1.06
VAMP1-206ENST00000538970 TREM1Q9NP99 234 aa8.43□□□□□ -1.06
VAMP1-206ENST00000538970 A0A1W2PPV4 95 aa8.42□□□□□ -1.06
VAMP1-206ENST00000538970 Q5VSD8 79 aa8.42□□□□□ -1.06
VAMP1-206ENST00000538970 NHLRC2Q8NBF2 726 aa8.42□□□□□ -1.06
VAMP1-206ENST00000538970 KCNS1Q96KK3 526 aa8.42□□□□□ -1.06
VAMP1-206ENST00000538970 VPS13BQ7Z7G8 4022 aa8.41□□□□□ -1.06
VAMP1-206ENST00000538970 IGHV3-38A0A0C4DH36 116 aa8.41□□□□□ -1.06
VAMP1-206ENST00000538970 FBLL1A6NHQ2 334 aaKnown RBP8.41□□□□□ -1.06
VAMP1-206ENST00000538970 HMGB3O15347 200 aaKnown RBP8.41□□□□□ -1.06
VAMP1-206ENST00000538970 PPT1P50897 306 aa8.41□□□□□ -1.06
VAMP1-206ENST00000538970 LINC01556Q5JQF7 62 aa8.41□□□□□ -1.06
VAMP1-206ENST00000538970 OR10G9Q8NGN4 311 aa8.41□□□□□ -1.06
VAMP1-206ENST00000538970 OR10G7Q8NGN6 311 aa8.41□□□□□ -1.06
VAMP1-206ENST00000538970 ASB13Q8WXK3 278 aa8.41□□□□□ -1.06
VAMP1-206ENST00000538970 LRCOL1A6NCL2 159 aa8.4□□□□□ -1.06
VAMP1-206ENST00000538970 ARL14EPLP0DKL9 152 aa8.4□□□□□ -1.06
VAMP1-206ENST00000538970 GCSHP23434 173 aa8.4□□□□□ -1.06
VAMP1-206ENST00000538970 SLC25A29Q8N8R3 303 aa8.4□□□□□ -1.06
VAMP1-206ENST00000538970 FRZBQ92765 325 aa8.4□□□□□ -1.06
VAMP1-206ENST00000538970 SGK494Q96LW2 274 aa8.4□□□□□ -1.06
VAMP1-206ENST00000538970 NDFIP1Q9BT67 221 aa8.4□□□□□ -1.06
VAMP1-206ENST00000538970 C11orf21Q9P2W6 132 aa8.4□□□□□ -1.06
VAMP1-206ENST00000538970 SERTM2A0A1B0GWG4 89 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 RS1O15537 224 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 TCRAP04437 139 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 STAG3L2P0CL84 134 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 STAG3L3P0CL85 134 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 CDC34P49427 236 aaPredicted RBP8.39□□□□□ -1.07
VAMP1-206ENST00000538970 ZNF80P51504 273 aaPredicted RBP8.39□□□□□ -1.07
VAMP1-206ENST00000538970 DEFA1P59665 94 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 DEFA3P59666 94 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 RHOHQ15669 191 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 ZNF876PQ49A33 203 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 CFAP126Q5VTH2 177 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 DPPA3Q6W0C5 159 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 C5orf17Q8NAS9 161 aa8.39□□□□□ -1.07
VAMP1-206ENST00000538970 TRBV6-4A0A1B0GX49 114 aa8.38□□□□□ -1.07
VAMP1-206ENST00000538970 IBA57-AS1B1ANH7 110 aa8.38□□□□□ -1.07
VAMP1-206ENST00000538970 PSCAO43653 123 aa8.38□□□□□ -1.07
VAMP1-206ENST00000538970 CIDEAO60543 219 aa8.38□□□□□ -1.07
VAMP1-206ENST00000538970 PFN1P07737 140 aaKnown RBP8.38□□□□□ -1.07
VAMP1-206ENST00000538970 OR2G3Q8NGZ4 309 aa8.38□□□□□ -1.07
VAMP1-206ENST00000538970 SUN5Q8TC36 379 aa8.38□□□□□ -1.07
VAMP1-206ENST00000538970 NTN5Q8WTR8 489 aaPredicted RBP8.38□□□□□ -1.07
VAMP1-206ENST00000538970 C9orf85Q96MD7 179 aa8.38□□□□□ -1.07
VAMP1-206ENST00000538970 PRADC1Q9BSG0 188 aa8.38□□□□□ -1.07
VAMP1-206ENST00000538970 IGLV5-52A0A0A0MRZ9 124 aa8.37□□□□□ -1.07
VAMP1-206ENST00000538970 TRAV8-6A0A0B4J262 113 aa8.37□□□□□ -1.07
VAMP1-206ENST00000538970 A6NHS1 94 aa8.37□□□□□ -1.07
VAMP1-206ENST00000538970 TAAR5O14804 337 aa8.37□□□□□ -1.07
VAMP1-206ENST00000538970 GCGP01275 180 aa8.37□□□□□ -1.07
VAMP1-206ENST00000538970 IGLV2-11P01706 119 aa8.37□□□□□ -1.07
VAMP1-206ENST00000538970 SMR3BP02814 79 aaPredicted RBP8.37□□□□□ -1.07
VAMP1-206ENST00000538970 OR10J3Q5JRS4 329 aa8.37□□□□□ -1.07
VAMP1-206ENST00000538970 TMEM75Q8N9X5 138 aa8.37□□□□□ -1.07
VAMP1-206ENST00000538970 HSD17B11Q8NBQ5 300 aa8.37□□□□□ -1.07
VAMP1-206ENST00000538970 PSG8Q9UQ74 426 aa8.37□□□□□ -1.07
VAMP1-206ENST00000538970 BOLA1Q9Y3E2 137 aa8.37□□□□□ -1.07
VAMP1-206ENST00000538970 SRRM2Q9UQ35 2752 aaKnown RBP8.36□□□□□ -1.07
VAMP1-206ENST00000538970 IGHV3-73A0A0B4J1V6 119 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 PGPEP1LA6NFU8 196 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 GGTLC3B5MD39 225 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 K7EQM0 130 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 GCHFRP30047 84 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 HAMPP81172 84 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 ZFP69Q49AA0 526 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 ZNF506Q5JVG8 444 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 LELP1Q5T871 98 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 Q8N814 137 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 RAB24Q969Q5 203 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 PTH2Q96A98 100 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 PSMG3Q9BT73 122 aaPredicted RBP8.36□□□□□ -1.07
VAMP1-206ENST00000538970 TMEM70Q9BUB7 260 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 Q9HAA7 133 aa8.36□□□□□ -1.07
VAMP1-206ENST00000538970 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms