RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 DSCR9P59020 149 aa11.18□□□□□ -0.62
CDCA3-207ENST00000538862 ERCC8Q13216 396 aa11.18□□□□□ -0.62
CDCA3-207ENST00000538862 CLEC19AQ6UXS0 136 aa11.18□□□□□ -0.62
CDCA3-207ENST00000538862 MRPL53Q96EL3 112 aaKnown RBP11.18□□□□□ -0.62
CDCA3-207ENST00000538862 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
CDCA3-207ENST00000538862 ATP6V0BQ99437 205 aa11.18□□□□□ -0.62
CDCA3-207ENST00000538862 PRAC2D3DTV9 90 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 TAX1BP3O14907 124 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 PIMREGQ9BSJ6 248 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 BPESC1Q9GZL8 116 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 CST9LQ9H4G1 147 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 HIF1ANQ9NWT6 349 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 NPFFO15130 113 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 CD5LO43866 347 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 SLC25A16P16260 332 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 C2orf91Q6ZV80 131 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 METTL26Q96S19 204 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 MAP1LC3AQ9H492 121 aa11.17□□□□□ -0.62
CDCA3-207ENST00000538862 INAFM1C9JVW0 142 aa11.16□□□□□ -0.62
CDCA3-207ENST00000538862 G3V318 75 aa11.16□□□□□ -0.62
CDCA3-207ENST00000538862 SMKR1H3BMG3 65 aa11.16□□□□□ -0.62
CDCA3-207ENST00000538862 RIPPLY3P57055 190 aa11.16□□□□□ -0.62
CDCA3-207ENST00000538862 IFI27L1Q96BM0 104 aa11.16□□□□□ -0.62
CDCA3-207ENST00000538862 U3KQE9 123 aa11.16□□□□□ -0.62
CDCA3-207ENST00000538862 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.15□□□□□ -0.629e-7■■■□□ 17.4
CDCA3-207ENST00000538862 IGHV4-61A0A0C4DH41 118 aa11.15□□□□□ -0.62
CDCA3-207ENST00000538862 IL17RELQ6ZVW7 336 aa11.15□□□□□ -0.62
CDCA3-207ENST00000538862 RNF182Q8N6D2 247 aa11.15□□□□□ -0.62
CDCA3-207ENST00000538862 C5orf56Q8N8D9 126 aa11.15□□□□□ -0.62
CDCA3-207ENST00000538862 MSRB1Q9NZV6 116 aa11.15□□□□□ -0.62
CDCA3-207ENST00000538862 LINC01548A6NM66 108 aa11.15□□□□□ -0.62
CDCA3-207ENST00000538862 FGF6P10767 208 aa11.15□□□□□ -0.62
CDCA3-207ENST00000538862 AGPAT4-IT1Q9H0P7 198 aa11.15□□□□□ -0.62
CDCA3-207ENST00000538862 NXT2Q9NPJ8 142 aaKnown RBP11.15□□□□□ -0.62
CDCA3-207ENST00000538862 TRAV8-2A0A0B4J237 113 aa11.14□□□□□ -0.63
CDCA3-207ENST00000538862 CACNG7P62955 275 aa11.14□□□□□ -0.63
CDCA3-207ENST00000538862 ATP5G2Q06055 141 aa11.14□□□□□ -0.63
CDCA3-207ENST00000538862 VAMP3Q15836 100 aa11.14□□□□□ -0.63
CDCA3-207ENST00000538862 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
CDCA3-207ENST00000538862 C9orf47Q6ZRZ4 202 aa11.14□□□□□ -0.63
CDCA3-207ENST00000538862 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 PSMG4Q5JS54 123 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 BOD1L2Q8IYS8 172 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 YAE1D1Q9NRH1 226 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 IGHV3-66A0A0C4DH42 116 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 FAM223BA6NKX1 122 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 SIVA1O15304 175 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 TNFRSF6BO95407 300 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 FCER1GP30273 86 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 FXYD7P58549 80 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 SEC11AP67812 179 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 C8orf86Q6ZUL3 223 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 FAM223AQ8IWN6 122 aa11.13□□□□□ -0.63
CDCA3-207ENST00000538862 IGHV4-31P0DP07 118 aa11.12□□□□□ -0.63
CDCA3-207ENST00000538862 CRIP2P52943 208 aaPredicted RBP11.12□□□□□ -0.63
CDCA3-207ENST00000538862 TMEM97Q5BJF2 176 aa11.12□□□□□ -0.63
CDCA3-207ENST00000538862 C19orf54Q5BKX5 351 aa11.12□□□□□ -0.63
CDCA3-207ENST00000538862 PIFOQ8TCI5 191 aa11.12□□□□□ -0.63
CDCA3-207ENST00000538862 MOB4Q9Y3A3 225 aa11.12□□□□□ -0.63
CDCA3-207ENST00000538862 CUBNO60494 3623 aa11.12□□□□□ -0.63
CDCA3-207ENST00000538862 OR9G4Q8NGQ1 327 aa11.11□□□□□ -0.63
CDCA3-207ENST00000538862 ZNF479Q96JC4 524 aa11.11□□□□□ -0.63
CDCA3-207ENST00000538862 C11orf21Q9P2W6 132 aa11.11□□□□□ -0.63
CDCA3-207ENST00000538862 IGHV3OR16-13A0A075B7E8 117 aa11.11□□□□□ -0.63
CDCA3-207ENST00000538862 IGHV3-74A0A0B4J1X5 117 aa11.11□□□□□ -0.63
CDCA3-207ENST00000538862 TRAV41A0A0B4J266 112 aa11.11□□□□□ -0.63
CDCA3-207ENST00000538862 LEPP41159 167 aa11.11□□□□□ -0.63
CDCA3-207ENST00000538862 Q8N8P6 123 aa11.11□□□□□ -0.63
CDCA3-207ENST00000538862 LENEPQ9Y5L5 61 aa11.11□□□□□ -0.63
CDCA3-207ENST00000538862 IGHV4-4A0A075B6R2 117 aa11.1□□□□□ -0.63
CDCA3-207ENST00000538862 SNAI2O43623 268 aa11.1□□□□□ -0.63
CDCA3-207ENST00000538862 PPIFP30405 207 aaKnown RBP11.1□□□□□ -0.63
CDCA3-207ENST00000538862 GAS8-AS1O95177 125 aa11.09□□□□□ -0.63
CDCA3-207ENST00000538862 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
CDCA3-207ENST00000538862 IGHV7-4-1A0A0J9YVY3 117 aa11.09□□□□□ -0.63
CDCA3-207ENST00000538862 ZNF207O43670 478 aaKnown RBP11.09□□□□□ -0.63
CDCA3-207ENST00000538862 FOXE3Q13461 319 aa11.09□□□□□ -0.63
CDCA3-207ENST00000538862 SAMD13Q5VXD3 122 aa11.09□□□□□ -0.63
CDCA3-207ENST00000538862 C9orf139Q6ZV77 190 aa11.09□□□□□ -0.63
CDCA3-207ENST00000538862 OR4X2Q8NGF9 303 aa11.09□□□□□ -0.63
CDCA3-207ENST00000538862 GLMPQ8WWB7 406 aa11.09□□□□□ -0.63
CDCA3-207ENST00000538862 PEF1Q9UBV8 284 aaKnown RBP11.09□□□□□ -0.63
CDCA3-207ENST00000538862 IGLV2-18A0A075B6J9 118 aa11.08□□□□□ -0.64
CDCA3-207ENST00000538862 IGHV3-49A0A0A0MS15 119 aa11.08□□□□□ -0.64
CDCA3-207ENST00000538862 HSD52Q0P140 79 aa11.08□□□□□ -0.64
CDCA3-207ENST00000538862 TMEM219Q86XT9 240 aa11.08□□□□□ -0.64
CDCA3-207ENST00000538862 OR2K2Q8NGT1 345 aa11.08□□□□□ -0.64
CDCA3-207ENST00000538862 C16orf92Q96LL3 132 aa11.08□□□□□ -0.64
CDCA3-207ENST00000538862 MEGF9Q9H1U4 602 aa11.08□□□□□ -0.64
CDCA3-207ENST00000538862 DKK2Q9UBU2 259 aa11.08□□□□□ -0.64
CDCA3-207ENST00000538862 IGHV1-69DA0A0B4J2H0 117 aa11.07□□□□□ -0.64
CDCA3-207ENST00000538862 BRI3O95415 125 aa11.07□□□□□ -0.64
CDCA3-207ENST00000538862 IGHV1-69P01742 117 aa11.07□□□□□ -0.64
CDCA3-207ENST00000538862 EVI2AP22794 236 aa11.07□□□□□ -0.64
CDCA3-207ENST00000538862 ODF1Q14990 250 aa11.07□□□□□ -0.64
CDCA3-207ENST00000538862 C7orf71A4D174 169 aa11.07□□□□□ -0.64
CDCA3-207ENST00000538862 TGFAP01135 160 aa11.07□□□□□ -0.64
CDCA3-207ENST00000538862 TRGV3P03979 118 aa11.07□□□□□ -0.64
CDCA3-207ENST00000538862 ARL3P36405 182 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms