RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 HIGD1CA8MV81 97 aa12.62□□□□□ -0.39
CLN6-202ENST00000538696 KLLNB2CW77 178 aa12.62□□□□□ -0.39
CLN6-202ENST00000538696 SPINK4O60575 86 aa12.62□□□□□ -0.39
CLN6-202ENST00000538696 RNASE4P34096 147 aaKnown RBP12.62□□□□□ -0.39
CLN6-202ENST00000538696 LEPP41159 167 aa12.62□□□□□ -0.39
CLN6-202ENST00000538696 AMTNQ6UX39 209 aa12.62□□□□□ -0.39
CLN6-202ENST00000538696 BTF3L4Q96K17 158 aa12.62□□□□□ -0.39
CLN6-202ENST00000538696 CLUHP3Q96NS8 147 aa12.62□□□□□ -0.39
CLN6-202ENST00000538696 NAT8BQ9UHF3 227 aa12.62□□□□□ -0.39
CLN6-202ENST00000538696 ORM1P02763 201 aa12.61□□□□□ -0.39
CLN6-202ENST00000538696 GPX1P07203 203 aa12.61□□□□□ -0.39
CLN6-202ENST00000538696 LINC01559Q495D7 138 aa12.61□□□□□ -0.39
CLN6-202ENST00000538696 GFRA4Q9GZZ7 299 aa12.61□□□□□ -0.39
CLN6-202ENST00000538696 IGKV3D-20A0A0C4DH25 116 aa12.6□□□□□ -0.39
CLN6-202ENST00000538696 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
CLN6-202ENST00000538696 MRPL54Q6P161 138 aaKnown RBP12.6□□□□□ -0.39
CLN6-202ENST00000538696 PGLYRP4Q96LB8 373 aa12.6□□□□□ -0.39
CLN6-202ENST00000538696 TRAV21A0A0B4J279 112 aa12.59□□□□□ -0.39
CLN6-202ENST00000538696 GRIFINA4D1Z8 144 aa12.59□□□□□ -0.39
CLN6-202ENST00000538696 M0R2Z0 102 aa12.59□□□□□ -0.39
CLN6-202ENST00000538696 FXYD7P58549 80 aa12.59□□□□□ -0.39
CLN6-202ENST00000538696 SPINK13Q1W4C9 94 aa12.59□□□□□ -0.39
CLN6-202ENST00000538696 Q6AWC8 147 aa12.59□□□□□ -0.39
CLN6-202ENST00000538696 MORN3Q6PF18 240 aaPredicted RBP12.59□□□□□ -0.39
CLN6-202ENST00000538696 ZNF575Q86XF7 245 aa12.59□□□□□ -0.39
CLN6-202ENST00000538696 KIR2DL5BA0A0G2JN68 375 aa12.58□□□□□ -0.4
CLN6-202ENST00000538696 KIR2DL5BA0A0G2JPC4 375 aa12.58□□□□□ -0.4
CLN6-202ENST00000538696 C7orf71A4D174 169 aa12.58□□□□□ -0.4
CLN6-202ENST00000538696 FAM231BA6NCW3 169 aa12.58□□□□□ -0.4
CLN6-202ENST00000538696 GIG44P09565 113 aaPredicted RBP12.58□□□□□ -0.4
CLN6-202ENST00000538696 APOC4P55056 127 aa12.58□□□□□ -0.4
CLN6-202ENST00000538696 GFI1BQ5VTD9 330 aa12.58□□□□□ -0.4
CLN6-202ENST00000538696 KIR2DL5AQ8N109 375 aa12.58□□□□□ -0.4
CLN6-202ENST00000538696 KIR2DL5BQ8NHK3 375 aa12.58□□□□□ -0.4
CLN6-202ENST00000538696 NAGKQ9UJ70 344 aa12.58□□□□□ -0.4
CLN6-202ENST00000538696 MEGF8Q7Z7M0 2845 aa12.57□□□□□ -0.4
CLN6-202ENST00000538696 TRAV12-2A0A075B6T6 113 aa12.57□□□□□ -0.4
CLN6-202ENST00000538696 XKRY2A2RUG3 117 aa12.57□□□□□ -0.4
CLN6-202ENST00000538696 TSPOP30536 169 aa12.57□□□□□ -0.4
CLN6-202ENST00000538696 FOXA3P55318 350 aaPredicted RBP12.57□□□□□ -0.4
CLN6-202ENST00000538696 CSTL1Q9H114 145 aa12.57□□□□□ -0.4
CLN6-202ENST00000538696 TRAV12-3A0A0B4J271 114 aa12.56□□□□□ -0.4
CLN6-202ENST00000538696 C1orf196B1AJZ1 125 aa12.56□□□□□ -0.4
CLN6-202ENST00000538696 TRGC2P03986 189 aa12.56□□□□□ -0.4
CLN6-202ENST00000538696 IGLC6P0CF74 106 aa12.56□□□□□ -0.4
CLN6-202ENST00000538696 CDKN1BP46527 198 aa12.56□□□□□ -0.4
CLN6-202ENST00000538696 SBSPONQ8IVN8 264 aa12.56□□□□□ -0.4
CLN6-202ENST00000538696 PRKDCP78527 4128 aaKnown RBP12.55□□□□□ -0.4
CLN6-202ENST00000538696 A0A1B0GXF2 115 aa12.55□□□□□ -0.4
CLN6-202ENST00000538696 NUTF2P61970 127 aaKnown RBP12.55□□□□□ -0.4
CLN6-202ENST00000538696 ANXA2RQ3ZCQ2 193 aa12.55□□□□□ -0.4
CLN6-202ENST00000538696 MUC21Q5SSG8 566 aa12.55□□□□□ -0.4
CLN6-202ENST00000538696 ZFP82Q8N141 532 aa12.55□□□□□ -0.4
CLN6-202ENST00000538696 FER1L6-AS1Q8NA97 138 aa12.55□□□□□ -0.4
CLN6-202ENST00000538696 TPPP3Q9BW30 176 aa12.55□□□□□ -0.4
CLN6-202ENST00000538696 XCL2Q9UBD3 114 aa12.55□□□□□ -0.4
CLN6-202ENST00000538696 DNAH9Q9NYC9 4486 aa12.54□□□□□ -0.4
CLN6-202ENST00000538696 PHOX2AO14813 284 aa12.54□□□□□ -0.4
CLN6-202ENST00000538696 CRXO43186 299 aaPredicted RBP12.54□□□□□ -0.4
CLN6-202ENST00000538696 ARMS2P0C7Q2 107 aa12.54□□□□□ -0.4
CLN6-202ENST00000538696 CTRLP40313 264 aa12.54□□□□□ -0.4
CLN6-202ENST00000538696 LYZL1Q6UWQ5 148 aa12.54□□□□□ -0.4
CLN6-202ENST00000538696 TMEM136Q6ZRR5 245 aa12.54□□□□□ -0.4
CLN6-202ENST00000538696 ATP5L2Q7Z4Y8 100 aa12.54□□□□□ -0.4
CLN6-202ENST00000538696 B9D2Q9BPU9 175 aa12.54□□□□□ -0.4
CLN6-202ENST00000538696 SNURFLB1AK76 121 aa12.53□□□□□ -0.4
CLN6-202ENST00000538696 UBE2CO00762 179 aa12.53□□□□□ -0.4
CLN6-202ENST00000538696 ZNF324O75467 553 aaPredicted RBP12.53□□□□□ -0.4
CLN6-202ENST00000538696 RAB5BP61020 215 aa12.53□□□□□ -0.4
CLN6-202ENST00000538696 TRAPPC1Q9Y5R8 145 aa12.53□□□□□ -0.4
CLN6-202ENST00000538696 FBN3Q75N90 2809 aa12.53□□□□□ -0.4
CLN6-202ENST00000538696 MUC21A0A0G2JKD1 596 aa12.52□□□□□ -0.41
CLN6-202ENST00000538696 MUC21A0A140T8X8 626 aa12.52□□□□□ -0.41
CLN6-202ENST00000538696 A0A1B0GUT8 65 aa12.52□□□□□ -0.41
CLN6-202ENST00000538696 AMBPP02760 352 aa12.52□□□□□ -0.41
CLN6-202ENST00000538696 RBMY1A1P0DJD3 496 aaKnown RBP12.52□□□□□ -0.41
CLN6-202ENST00000538696 RBMY1CP0DJD4 496 aa12.52□□□□□ -0.41
CLN6-202ENST00000538696 FABP9Q0Z7S8 132 aa12.52□□□□□ -0.41
CLN6-202ENST00000538696 RBMY1FQ15415 496 aaKnown RBP12.52□□□□□ -0.41
CLN6-202ENST00000538696 DEFB135Q30KP9 77 aa12.52□□□□□ -0.41
CLN6-202ENST00000538696 CSNK1G2-AS1Q8NCQ2 148 aa12.52□□□□□ -0.41
CLN6-202ENST00000538696 FRZBQ92765 325 aa12.52□□□□□ -0.41
CLN6-202ENST00000538696 RETNQ9HD89 108 aa12.52□□□□□ -0.41
CLN6-202ENST00000538696 CAMPP49913 170 aa12.51□□□□□ -0.41
CLN6-202ENST00000538696 RAB4BP61018 213 aa12.51□□□□□ -0.41
CLN6-202ENST00000538696 HBBP68871 147 aa12.51□□□□□ -0.41
CLN6-202ENST00000538696 RIGQ13278 110 aa12.51□□□□□ -0.41
CLN6-202ENST00000538696 COX19Q49B96 90 aa12.51□□□□□ -0.41
CLN6-202ENST00000538696 WDR73Q6P4I2 378 aa12.51□□□□□ -0.41
CLN6-202ENST00000538696 RASL11AQ6T310 242 aa12.51□□□□□ -0.41
CLN6-202ENST00000538696 C1QTNF4Q9BXJ3 329 aa12.51□□□□□ -0.41
CLN6-202ENST00000538696 GNB1LQ9BYB4 327 aa12.51□□□□□ -0.41
CLN6-202ENST00000538696 MRPL18Q9H0U6 180 aaKnown RBP12.51□□□□□ -0.41
CLN6-202ENST00000538696 H3BVH4 76 aa12.5□□□□□ -0.41
CLN6-202ENST00000538696 INSP01308 110 aa12.5□□□□□ -0.41
CLN6-202ENST00000538696 Q6ZWC4 215 aa12.5□□□□□ -0.41
CLN6-202ENST00000538696 BORCS7Q96B45 105 aa12.5□□□□□ -0.41
CLN6-202ENST00000538696 TM2D3Q9BRN9 247 aa12.5□□□□□ -0.41
CLN6-202ENST00000538696 HUWE1Q7Z6Z7 4374 aaKnown RBP12.49□□□□□ -0.41
CLN6-202ENST00000538696 GNRH2O43555 120 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms