RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 J3QKU1 62 aa10.58□□□□□ -0.72
LIMK1-208ENST00000538333 HBDP02042 147 aa10.58□□□□□ -0.72
LIMK1-208ENST00000538333 Q6YL49 198 aa10.58□□□□□ -0.72
LIMK1-208ENST00000538333 MAP1LC3AQ9H492 121 aa10.58□□□□□ -0.72
LIMK1-208ENST00000538333 BEX4Q9NWD9 120 aaPredicted RBP10.58□□□□□ -0.72
LIMK1-208ENST00000538333 IGKV3-7A0A075B6H7 116 aa10.57□□□□□ -0.72
LIMK1-208ENST00000538333 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
LIMK1-208ENST00000538333 TRBV7-9A0A0J9YWB2 115 aa10.57□□□□□ -0.72
LIMK1-208ENST00000538333 TNFRSF6BO95407 300 aa10.57□□□□□ -0.72
LIMK1-208ENST00000538333 RPLP1P05386 114 aaKnown RBP10.57□□□□□ -0.72
LIMK1-208ENST00000538333 FXYD7P58549 80 aa10.57□□□□□ -0.72
LIMK1-208ENST00000538333 DEFB113Q30KQ7 82 aa10.57□□□□□ -0.72
LIMK1-208ENST00000538333 DCANP1Q8TF63 244 aa10.57□□□□□ -0.72
LIMK1-208ENST00000538333 PMCHL2Q9BQD1 86 aa10.57□□□□□ -0.72
LIMK1-208ENST00000538333 SELENOKQ9Y6D0 94 aa10.57□□□□□ -0.72
LIMK1-208ENST00000538333 H3BVH4 76 aa10.56□□□□□ -0.72
LIMK1-208ENST00000538333 J3KRW8 73 aa10.56□□□□□ -0.72
LIMK1-208ENST00000538333 GATA1P15976 413 aaPredicted RBP10.56□□□□□ -0.72
LIMK1-208ENST00000538333 CACNG7P62955 275 aa10.56□□□□□ -0.72
LIMK1-208ENST00000538333 BATFQ16520 125 aa10.56□□□□□ -0.72
LIMK1-208ENST00000538333 LRRC75A-AS1Q8N1F1 130 aa10.56□□□□□ -0.72
LIMK1-208ENST00000538333 MYOZ3Q8TDC0 251 aa10.56□□□□□ -0.72
LIMK1-208ENST00000538333 UFC1Q9Y3C8 167 aa10.56□□□□□ -0.72
LIMK1-208ENST00000538333 SRD5A1P18405 259 aa10.55□□□□□ -0.72
LIMK1-208ENST00000538333 KIR3DS1Q14943 382 aa10.55□□□□□ -0.72
LIMK1-208ENST00000538333 Q5PR19 223 aa10.55□□□□□ -0.72
LIMK1-208ENST00000538333 ZNF702PQ9H963 129 aa10.55□□□□□ -0.72
LIMK1-208ENST00000538333 DOPEY2Q9Y3R5 2298 aa10.55□□□□□ -0.72
LIMK1-208ENST00000538333 TCAPO15273 167 aa10.55□□□□□ -0.72
LIMK1-208ENST00000538333 SPANXN1Q5VSR9 72 aa10.55□□□□□ -0.72
LIMK1-208ENST00000538333 NXT2Q9NPJ8 142 aaKnown RBP10.55□□□□□ -0.72
LIMK1-208ENST00000538333 TP73-AS1Q9UF72 201 aa10.55□□□□□ -0.72
LIMK1-208ENST00000538333 CENPEQ02224 2701 aa10.54□□□□□ -0.72
LIMK1-208ENST00000538333 IGLV2-18A0A075B6J9 118 aa10.54□□□□□ -0.72
LIMK1-208ENST00000538333 NBPF19A0A087WUL8 3843 aa10.54□□□□□ -0.72
LIMK1-208ENST00000538333 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
LIMK1-208ENST00000538333 NRACQ8N912 160 aa10.54□□□□□ -0.72
LIMK1-208ENST00000538333 MS4A6AQ9H2W1 248 aa10.54□□□□□ -0.72
LIMK1-208ENST00000538333 SCRT2Q9NQ03 307 aa10.54□□□□□ -0.72
LIMK1-208ENST00000538333 PRSS47A8MTI9 375 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 HSBP1L1C9JCN9 74 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 LGALS9BQ3B8N2 356 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 ANXA2RQ3ZCQ2 193 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 SAMD13Q5VXD3 122 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 LGALS9CQ6DKI2 356 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 SMIM15Q7Z3B0 74 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 STPG4Q8N801 248 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 OR2K2Q8NGT1 345 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 RNASE4P34096 147 aaKnown RBP10.53□□□□□ -0.72
LIMK1-208ENST00000538333 COL5A1-AS1Q5SY13 56 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 KRTAP1-3Q8IUG1 177 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 IFI27L1Q96BM0 104 aa10.53□□□□□ -0.72
LIMK1-208ENST00000538333 KLLNB2CW77 178 aa10.52□□□□□ -0.72
LIMK1-208ENST00000538333 HOXA3O43365 443 aaPredicted RBP10.52□□□□□ -0.72
LIMK1-208ENST00000538333 ELANEP08246 267 aa10.52□□□□□ -0.72
LIMK1-208ENST00000538333 LGALS1P09382 135 aaKnown RBP10.52□□□□□ -0.72
LIMK1-208ENST00000538333 MED14OSP0DP75 135 aa10.52□□□□□ -0.72
LIMK1-208ENST00000538333 ID1P41134 155 aa10.52□□□□□ -0.72
LIMK1-208ENST00000538333 Q8N8P6 123 aa10.52□□□□□ -0.72
LIMK1-208ENST00000538333 TRAV26-2A0A0B4J265 109 aa10.52□□□□□ -0.73
LIMK1-208ENST00000538333 FCER1GP30273 86 aa10.52□□□□□ -0.73
LIMK1-208ENST00000538333 RNF152Q8N8N0 203 aa10.52□□□□□ -0.73
LIMK1-208ENST00000538333 GOLT1BQ9Y3E0 138 aa10.52□□□□□ -0.73
LIMK1-208ENST00000538333 MXRA5Q9NR99 2828 aa10.51□□□□□ -0.73
LIMK1-208ENST00000538333 ASIPP42127 132 aa10.51□□□□□ -0.73
LIMK1-208ENST00000538333 TFPI2P48307 235 aa10.51□□□□□ -0.73
LIMK1-208ENST00000538333 SLC25A34Q6PIV7 304 aa10.51□□□□□ -0.73
LIMK1-208ENST00000538333 Q96MF0 132 aa10.51□□□□□ -0.73
LIMK1-208ENST00000538333 NAV2Q8IVL1 2488 aa10.51□□□□□ -0.73
LIMK1-208ENST00000538333 ZNF469Q96JG9 3925 aaPredicted RBP10.51□□□□□ -0.73
LIMK1-208ENST00000538333 ABCA12Q86UK0 2595 aa10.51□□□□□ -0.73
LIMK1-208ENST00000538333 LGALS9O00182 355 aa10.5□□□□□ -0.73
LIMK1-208ENST00000538333 RNASE3P12724 160 aaKnown RBP10.5□□□□□ -0.73
LIMK1-208ENST00000538333 LEPP41159 167 aa10.5□□□□□ -0.73
LIMK1-208ENST00000538333 WFDC3Q8IUB2 231 aa10.5□□□□□ -0.73
LIMK1-208ENST00000538333 UBE2E2Q96LR5 201 aa10.5□□□□□ -0.73
LIMK1-208ENST00000538333 IGHV4OR15-8A0A075B7B6 117 aa10.5□□□□□ -0.73
LIMK1-208ENST00000538333 A0A087WW49 117 aa10.5□□□□□ -0.73
LIMK1-208ENST00000538333 SPRY2O43597 315 aa10.5□□□□□ -0.73
LIMK1-208ENST00000538333 HINT1P49773 126 aaPredicted RBP10.5□□□□□ -0.73
LIMK1-208ENST00000538333 DPF1Q92782 380 aa10.5□□□□□ -0.73
LIMK1-208ENST00000538333 MRAP2Q96G30 205 aa10.5□□□□□ -0.73
LIMK1-208ENST00000538333 MUC4Q99102 2169 aa10.49□□□□□ -0.73
LIMK1-208ENST00000538333 M0R381 172 aa10.49□□□□□ -0.73
LIMK1-208ENST00000538333 GNRH2O43555 120 aa10.49□□□□□ -0.73
LIMK1-208ENST00000538333 S100A4P26447 101 aaKnown RBP10.49□□□□□ -0.73
LIMK1-208ENST00000538333 SYNJ2BPP57105 145 aa10.49□□□□□ -0.73
LIMK1-208ENST00000538333 CREBBPQ92793 2442 aa10.49□□□□□ -0.73
LIMK1-208ENST00000538333 K7EQG2 157 aa10.49□□□□□ -0.73
LIMK1-208ENST00000538333 Q8N2B8 174 aa10.49□□□□□ -0.73
LIMK1-208ENST00000538333 PHLDA3Q9Y5J5 127 aa10.49□□□□□ -0.73
LIMK1-208ENST00000538333 COX8AP10176 69 aa10.48□□□□□ -0.73
LIMK1-208ENST00000538333 HOXD3P31249 432 aaPredicted RBP10.48□□□□□ -0.73
LIMK1-208ENST00000538333 TMEM158Q8WZ71 300 aa10.48□□□□□ -0.73
LIMK1-208ENST00000538333 TEX15Q9BXT5 2789 aa10.48□□□□□ -0.73
LIMK1-208ENST00000538333 CD5LO43866 347 aa10.48□□□□□ -0.73
LIMK1-208ENST00000538333 NXPH4O95158 308 aa10.48□□□□□ -0.73
LIMK1-208ENST00000538333 ZNF688P0C7X2 276 aa10.48□□□□□ -0.73
LIMK1-208ENST00000538333 ZNF25P17030 456 aaPredicted RBP10.48□□□□□ -0.73
LIMK1-208ENST00000538333 ANKRD39Q53RE8 183 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms