RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-210	ENST00000538318	SH2D6	Q7Z4S9	175 aa		11.27	□□□□□ -0.61
PTPN6-210	ENST00000538318	CMTM2	Q8TAZ6	248 aa		11.27	□□□□□ -0.61
PTPN6-210	ENST00000538318	TVP23C	Q96ET8	276 aa		11.27	□□□□□ -0.61
PTPN6-210	ENST00000538318	MARVELD1	Q9BSK0	173 aa		11.27	□□□□□ -0.61
PTPN6-210	ENST00000538318	LOC100131303	A0A0U1RQF7	123 aa		11.26	□□□□□ -0.61
PTPN6-210	ENST00000538318	TYMS	P04818	313 aa		11.26	□□□□□ -0.61
PTPN6-210	ENST00000538318	INAFM2	P0DMQ5	153 aa		11.26	□□□□□ -0.61
PTPN6-210	ENST00000538318	RPL12	P30050	165 aa	Known RBP	11.26	□□□□□ -0.61
PTPN6-210	ENST00000538318	TIRAP	P58753	221 aa		11.26	□□□□□ -0.61
PTPN6-210	ENST00000538318	PQLC2	Q6ZP29	291 aa		11.26	□□□□□ -0.61
PTPN6-210	ENST00000538318	GOLT1A	Q6ZVE7	132 aa		11.26	□□□□□ -0.61
PTPN6-210	ENST00000538318	SMIM3	Q9BZL3	60 aa		11.26	□□□□□ -0.61
PTPN6-210	ENST00000538318	RPH3AL	Q9UNE2	315 aa		11.26	□□□□□ -0.61
PTPN6-210	ENST00000538318	GATA1	P15976	413 aa	Predicted RBP	11.25	□□□□□ -0.61
PTPN6-210	ENST00000538318		Q5VSD8	79 aa		11.25	□□□□□ -0.61
PTPN6-210	ENST00000538318	WFDC1	Q9HC57	220 aa		11.25	□□□□□ -0.61
PTPN6-210	ENST00000538318	TREM1	Q9NP99	234 aa		11.25	□□□□□ -0.61
PTPN6-210	ENST00000538318	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.25	□□□□□ -0.61
PTPN6-210	ENST00000538318	TRAV8-1	A0A0A6YYK1	113 aa		11.24	□□□□□ -0.61
PTPN6-210	ENST00000538318		F6UZH7	168 aa		11.24	□□□□□ -0.61
PTPN6-210	ENST00000538318	GCSH	P23434	173 aa		11.24	□□□□□ -0.61
PTPN6-210	ENST00000538318	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.24	□□□□□ -0.61
PTPN6-210	ENST00000538318	FRZB	Q92765	325 aa		11.24	□□□□□ -0.61
PTPN6-210	ENST00000538318	KCNS1	Q96KK3	526 aa		11.24	□□□□□ -0.61
PTPN6-210	ENST00000538318	SDF2L1	Q9HCN8	221 aa		11.24	□□□□□ -0.61
PTPN6-210	ENST00000538318	VPS13B	Q7Z7G8	4022 aa		11.23	□□□□□ -0.61
PTPN6-210	ENST00000538318	IGHV3-38	A0A0C4DH36	116 aa		11.23	□□□□□ -0.61
PTPN6-210	ENST00000538318		A0A1W2PPV4	95 aa		11.23	□□□□□ -0.61
PTPN6-210	ENST00000538318	SSNA1	O43805	119 aa		11.23	□□□□□ -0.61
PTPN6-210	ENST00000538318	NHLRC2	Q8NBF2	726 aa		11.23	□□□□□ -0.61
PTPN6-210	ENST00000538318	FBLL1	A6NHQ2	334 aa	Known RBP	11.22	□□□□□ -0.61
PTPN6-210	ENST00000538318	RAB2A	P61019	212 aa		11.22	□□□□□ -0.61
PTPN6-210	ENST00000538318	LINC01556	Q5JQF7	62 aa		11.22	□□□□□ -0.61
PTPN6-210	ENST00000538318	SLC25A29	Q8N8R3	303 aa		11.22	□□□□□ -0.61
PTPN6-210	ENST00000538318	ASB13	Q8WXK3	278 aa		11.22	□□□□□ -0.61
PTPN6-210	ENST00000538318	LRCOL1	A6NCL2	159 aa		11.21	□□□□□ -0.61
PTPN6-210	ENST00000538318	IBA57-AS1	B1ANH7	110 aa		11.21	□□□□□ -0.61
PTPN6-210	ENST00000538318	CIDEA	O60543	219 aa		11.21	□□□□□ -0.61
PTPN6-210	ENST00000538318	PFN1	P07737	140 aa	Known RBP	11.21	□□□□□ -0.61
PTPN6-210	ENST00000538318	PPT1	P50897	306 aa		11.21	□□□□□ -0.61
PTPN6-210	ENST00000538318	GNG5	P63218	68 aa		11.21	□□□□□ -0.61
PTPN6-210	ENST00000538318	OR10G9	Q8NGN4	311 aa		11.21	□□□□□ -0.61
PTPN6-210	ENST00000538318	OR10G7	Q8NGN6	311 aa		11.21	□□□□□ -0.61
PTPN6-210	ENST00000538318	BOLA1	Q9Y3E2	137 aa		11.21	□□□□□ -0.61
PTPN6-210	ENST00000538318	MYCBP2	O75592	4640 aa		11.2	□□□□□ -0.62
PTPN6-210	ENST00000538318	HMGB3	O15347	200 aa	Known RBP	11.2	□□□□□ -0.62
PTPN6-210	ENST00000538318	PSCA	O43653	123 aa		11.2	□□□□□ -0.62
PTPN6-210	ENST00000538318	ZNF876P	Q49A33	203 aa		11.2	□□□□□ -0.62
PTPN6-210	ENST00000538318	CFAP126	Q5VTH2	177 aa		11.2	□□□□□ -0.62
PTPN6-210	ENST00000538318	NTN5	Q8WTR8	489 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN6-210	ENST00000538318	SRRM2	Q9UQ35	2752 aa	Known RBP	11.19	□□□□□ -0.62
PTPN6-210	ENST00000538318	IGLV5-52	A0A0A0MRZ9	124 aa		11.19	□□□□□ -0.62
PTPN6-210	ENST00000538318	TRAV8-6	A0A0B4J262	113 aa		11.19	□□□□□ -0.62
PTPN6-210	ENST00000538318	SERTM2	A0A1B0GWG4	89 aa		11.19	□□□□□ -0.62
PTPN6-210	ENST00000538318	TRBV6-4	A0A1B0GX49	114 aa		11.19	□□□□□ -0.62
PTPN6-210	ENST00000538318	RS1	O15537	224 aa		11.19	□□□□□ -0.62
PTPN6-210	ENST00000538318	SMR3B	P02814	79 aa	Predicted RBP	11.19	□□□□□ -0.62
PTPN6-210	ENST00000538318	DPPA3	Q6W0C5	159 aa		11.19	□□□□□ -0.62
PTPN6-210	ENST00000538318	SGK494	Q96LW2	274 aa		11.19	□□□□□ -0.62
PTPN6-210	ENST00000538318	NDFIP1	Q9BT67	221 aa		11.19	□□□□□ -0.62
PTPN6-210	ENST00000538318	C11orf21	Q9P2W6	132 aa		11.19	□□□□□ -0.62
PTPN6-210	ENST00000538318	TAAR5	O14804	337 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	TCRA	P04437	139 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	STAG3L2	P0CL84	134 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	STAG3L3	P0CL85	134 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	ARL14EPL	P0DKL9	152 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	ZNF80	P51504	273 aa	Predicted RBP	11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	RHOH	Q15669	191 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	OR10J3	Q5JRS4	329 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	C5orf17	Q8NAS9	161 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	OR2G3	Q8NGZ4	309 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	SUN5	Q8TC36	379 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	PTH2	Q96A98	100 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	C9orf85	Q96MD7	179 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	PRADC1	Q9BSG0	188 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	TMEM70	Q9BUB7	260 aa		11.18	□□□□□ -0.62
PTPN6-210	ENST00000538318	FLG2	Q5D862	2391 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN6-210	ENST00000538318	CDC34	P49427	236 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN6-210	ENST00000538318	DEFA1	P59665	94 aa		11.17	□□□□□ -0.62
PTPN6-210	ENST00000538318	DEFA3	P59666	94 aa		11.17	□□□□□ -0.62
PTPN6-210	ENST00000538318	LELP1	Q5T871	98 aa		11.17	□□□□□ -0.62
PTPN6-210	ENST00000538318	DNAH8	Q96JB1	4490 aa		11.16	□□□□□ -0.62
PTPN6-210	ENST00000538318	GCG	P01275	180 aa		11.16	□□□□□ -0.62
PTPN6-210	ENST00000538318	IGLV2-11	P01706	119 aa		11.16	□□□□□ -0.62
PTPN6-210	ENST00000538318		Q8N814	137 aa		11.16	□□□□□ -0.62
PTPN6-210	ENST00000538318	RAB24	Q969Q5	203 aa		11.16	□□□□□ -0.62
PTPN6-210	ENST00000538318	GTSF1L	Q9H1H1	148 aa		11.16	□□□□□ -0.62
PTPN6-210	ENST00000538318	PSG8	Q9UQ74	426 aa		11.16	□□□□□ -0.62
PTPN6-210	ENST00000538318	IGHV3-73	A0A0B4J1V6	119 aa		11.15	□□□□□ -0.62
PTPN6-210	ENST00000538318	PGPEP1L	A6NFU8	196 aa		11.15	□□□□□ -0.62
PTPN6-210	ENST00000538318	FAM229A	H3BQW9	127 aa		11.15	□□□□□ -0.62
PTPN6-210	ENST00000538318		K7EQM0	130 aa		11.15	□□□□□ -0.62
PTPN6-210	ENST00000538318	IGHV3-30	P01768	117 aa		11.15	□□□□□ -0.62
PTPN6-210	ENST00000538318	IGHV3-33	P01772	117 aa		11.15	□□□□□ -0.62
PTPN6-210	ENST00000538318	IGHV3-30-3	P0DP02	117 aa		11.15	□□□□□ -0.62
PTPN6-210	ENST00000538318	IGHV3-30-5	P0DP03	117 aa		11.15	□□□□□ -0.62
PTPN6-210	ENST00000538318	MGST1	P10620	155 aa	Known RBP	11.15	□□□□□ -0.62
PTPN6-210	ENST00000538318	GCHFR	P30047	84 aa		11.15	□□□□□ -0.62
PTPN6-210	ENST00000538318	ZNF506	Q5JVG8	444 aa		11.15	□□□□□ -0.62
PTPN6-210	ENST00000538318		Q9HAA7	133 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms