RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 PSG8Q9UQ74 426 aa14.85□□□□□ -0.03
CCDC78-215ENST00000538176 ARPC5O15511 151 aa14.84□□□□□ -0.03
CCDC78-215ENST00000538176 FLI1Q01543 452 aaPredicted RBP14.84□□□□□ -0.03
CCDC78-215ENST00000538176 TMEM75Q8N9X5 138 aa14.84□□□□□ -0.03
CCDC78-215ENST00000538176 HECTD4Q9Y4D8 3996 aa14.84□□□□□ -0.03
CCDC78-215ENST00000538176 IGHV3-16A0A0C4DH30 117 aa14.83□□□□□ -0.04
CCDC78-215ENST00000538176 IGHV3-53P01767 116 aa14.83□□□□□ -0.04
CCDC78-215ENST00000538176 SMUG1Q53HV7 270 aa14.83□□□□□ -0.04
CCDC78-215ENST00000538176 TRAV4A0A0B4J268 109 aa14.82□□□□□ -0.04
CCDC78-215ENST00000538176 GGTLC3B5MD39 225 aa14.82□□□□□ -0.04
CCDC78-215ENST00000538176 F6UZH7 168 aa14.82□□□□□ -0.04
CCDC78-215ENST00000538176 G3V3Q6 166 aa14.82□□□□□ -0.04
CCDC78-215ENST00000538176 GNRH2O43555 120 aa14.82□□□□□ -0.04
CCDC78-215ENST00000538176 CIDEAO60543 219 aa14.82□□□□□ -0.04
CCDC78-215ENST00000538176 ORM1P02763 201 aa14.82□□□□□ -0.04
CCDC78-215ENST00000538176 PFN1P07737 140 aaKnown RBP14.82□□□□□ -0.04
CCDC78-215ENST00000538176 PPT1P50897 306 aa14.82□□□□□ -0.04
CCDC78-215ENST00000538176 DNAH2Q9P225 4427 aa14.82□□□□□ -0.04
CCDC78-215ENST00000538176 TYMSP04818 313 aa14.81□□□□□ -0.04
CCDC78-215ENST00000538176 ZNF345Q14585 488 aa14.81□□□□□ -0.04
CCDC78-215ENST00000538176 NEGR1Q7Z3B1 354 aa14.81□□□□□ -0.04
CCDC78-215ENST00000538176 SGK494Q96LW2 274 aa14.81□□□□□ -0.04
CCDC78-215ENST00000538176 C8orf49Q96NF6 230 aa14.81□□□□□ -0.04
CCDC78-215ENST00000538176 GCGP01275 180 aa14.8□□□□□ -0.04
CCDC78-215ENST00000538176 IGLV2-11P01706 119 aa14.8□□□□□ -0.04
CCDC78-215ENST00000538176 OR4C5Q8NGB2 326 aa14.8□□□□□ -0.04
CCDC78-215ENST00000538176 STOML3Q8TAV4 291 aa14.8□□□□□ -0.04
CCDC78-215ENST00000538176 PCNPQ8WW12 178 aaKnown RBP14.8□□□□□ -0.04
CCDC78-215ENST00000538176 HIST1H2BAQ96A08 127 aa14.8□□□□□ -0.04
CCDC78-215ENST00000538176 DNAH17Q9UFH2 4485 aa14.8□□□□□ -0.04
CCDC78-215ENST00000538176 IFNA7P01567 189 aa14.79□□□□□ -0.04
CCDC78-215ENST00000538176 MED14OSP0DP75 135 aa14.79□□□□□ -0.04
CCDC78-215ENST00000538176 ZNF726P1Q15940 193 aa14.79□□□□□ -0.04
CCDC78-215ENST00000538176 PRNTQ86SH4 94 aa14.79□□□□□ -0.04
CCDC78-215ENST00000538176 ZNF479Q96JC4 524 aa14.79□□□□□ -0.04
CCDC78-215ENST00000538176 CYTL1Q9NRR1 136 aa14.79□□□□□ -0.04
CCDC78-215ENST00000538176 HMSDA8MTL9 139 aa14.78□□□□□ -0.04
CCDC78-215ENST00000538176 C9JCJ5 164 aa14.78□□□□□ -0.04
CCDC78-215ENST00000538176 SIVA1O15304 175 aa14.78□□□□□ -0.04
CCDC78-215ENST00000538176 SH2D6Q7Z4S9 175 aa14.78□□□□□ -0.04
CCDC78-215ENST00000538176 TCEAL7Q9BRU2 100 aa14.78□□□□□ -0.04
CCDC78-215ENST00000538176 FAT2Q9NYQ8 4349 aa14.78□□□□□ -0.04
CCDC78-215ENST00000538176 K7EP13 123 aa14.77□□□□□ -0.05
CCDC78-215ENST00000538176 SFTA3P0C7M3 94 aa14.77□□□□□ -0.05
CCDC78-215ENST00000538176 SRIP30626 198 aa14.77□□□□□ -0.05
CCDC78-215ENST00000538176 LYPD5Q6UWN5 251 aa14.77□□□□□ -0.05
CCDC78-215ENST00000538176 KCNRGQ8N5I3 272 aa14.77□□□□□ -0.05
CCDC78-215ENST00000538176 PTH2Q96A98 100 aa14.77□□□□□ -0.05
CCDC78-215ENST00000538176 TXNDC17Q9BRA2 123 aa14.77□□□□□ -0.05
CCDC78-215ENST00000538176 A0A0D9SG52 128 aa14.76□□□□□ -0.05
CCDC78-215ENST00000538176 ZNF80P51504 273 aaPredicted RBP14.76□□□□□ -0.05
CCDC78-215ENST00000538176 MAP1LC3B2A6NCE7 125 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 FAM74A7A6NL05 159 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 FABP5P3A8MUU1 101 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 UMAD1C9J7I0 102 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 K7EQD1 137 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 SEC11BP0C7V7 166 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 FHITP49789 147 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 EIF5AP63241 154 aaKnown RBP14.75□□□□□ -0.05
CCDC78-215ENST00000538176 TNP2Q05952 138 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 ZNF876PQ49A33 203 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 MAP1LC3BQ9GZQ8 125 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 ZFP30Q9Y2G7 519 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 ARL2-SNX15V9GYD0 113 aa14.75□□□□□ -0.05
CCDC78-215ENST00000538176 TRAV9-2A0A087WT02 112 aa14.74□□□□□ -0.05
CCDC78-215ENST00000538176 PEX7O00628 323 aa14.74□□□□□ -0.05
CCDC78-215ENST00000538176 GYPEP15421 78 aa14.74□□□□□ -0.05
CCDC78-215ENST00000538176 UBE2G2P60604 165 aa14.74□□□□□ -0.05
CCDC78-215ENST00000538176 BOLA1Q9Y3E2 137 aa14.74□□□□□ -0.05
CCDC78-215ENST00000538176 NXPH4O95158 308 aa14.73□□□□□ -0.05
CCDC78-215ENST00000538176 FGF8P55075 233 aaPredicted RBP14.73□□□□□ -0.05
CCDC78-215ENST00000538176 PIK3CD-AS1Q5SR53 167 aa14.73□□□□□ -0.05
CCDC78-215ENST00000538176 KANTRA0A1W2PQU2 76 aa14.72□□□□□ -0.05
CCDC78-215ENST00000538176 LINC00479Q96M42 142 aa14.72□□□□□ -0.05
CCDC78-215ENST00000538176 C9orf85Q96MD7 179 aa14.72□□□□□ -0.05
CCDC78-215ENST00000538176 C11orf21Q9P2W6 132 aa14.72□□□□□ -0.05
CCDC78-215ENST00000538176 DPPA3Q6W0C5 159 aa14.71□□□□□ -0.05
CCDC78-215ENST00000538176 COX8CQ7Z4L0 72 aa14.71□□□□□ -0.05
CCDC78-215ENST00000538176 FMC1Q96HJ9 113 aa14.71□□□□□ -0.05
CCDC78-215ENST00000538176 KRTAP1-5Q9BYS1 174 aa14.71□□□□□ -0.05
CCDC78-215ENST00000538176 TRAV34A0A0B4J273 112 aa14.7□□□□□ -0.06
CCDC78-215ENST00000538176 SMLR1H3BR10 107 aa14.7□□□□□ -0.06
CCDC78-215ENST00000538176 RS1O15537 224 aa14.7□□□□□ -0.06
CCDC78-215ENST00000538176 GATA1P15976 413 aaPredicted RBP14.7□□□□□ -0.06
CCDC78-215ENST00000538176 S100A4P26447 101 aaKnown RBP14.7□□□□□ -0.06
CCDC78-215ENST00000538176 UBE2G1P62253 170 aa14.7□□□□□ -0.06
CCDC78-215ENST00000538176 PRADC1Q9BSG0 188 aa14.7□□□□□ -0.06
CCDC78-215ENST00000538176 TRBV6-1A0A0K0K1D8 114 aa14.69□□□□□ -0.06
CCDC78-215ENST00000538176 TRBV6-4A0A1B0GX49 114 aa14.69□□□□□ -0.06
CCDC78-215ENST00000538176 TIRAPP58753 221 aa14.69□□□□□ -0.06
CCDC78-215ENST00000538176 CFAP126Q5VTH2 177 aa14.69□□□□□ -0.06
CCDC78-215ENST00000538176 NFE4Q86UQ8 179 aa14.69□□□□□ -0.06
CCDC78-215ENST00000538176 MBD3L1Q8WWY6 194 aa14.69□□□□□ -0.06
CCDC78-215ENST00000538176 ZNF471Q9BX82 626 aaPredicted RBP14.69□□□□□ -0.06
CCDC78-215ENST00000538176 LY96Q9Y6Y9 160 aa14.69□□□□□ -0.06
CCDC78-215ENST00000538176 BCL2L11O43521 198 aa14.68□□□□□ -0.06
CCDC78-215ENST00000538176 RNASE3P12724 160 aaKnown RBP14.68□□□□□ -0.06
CCDC78-215ENST00000538176 CST9LP1Q5W188 147 aa14.68□□□□□ -0.06
CCDC78-215ENST00000538176 Q86TA4 180 aa14.68□□□□□ -0.06
CCDC78-215ENST00000538176 PKD1P98161 4303 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms