RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TRBV20OR9-2A0A075B6H5 130 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 TRAV26-1A0A087WT03 109 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 DEFB131BA0A096LNP1 70 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 IGHV4-28A0A0C4DH34 117 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 SPART-AS1P0CW21 52 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 CKS2P33552 79 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 CBLN2Q8IUK8 224 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 FER1L6-AS1Q8NA97 138 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 SYT8Q8NBV8 401 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 PRSS3P2Q8NHM4 247 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 HIST1H2BAQ96A08 127 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 IMMP2LQ96T52 175 aa5.37□□□□□ -1.55
MSH6-209ENST00000538136 IGHV1OR15-1A0A075B7D0 117 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 HIGD1CA8MV81 97 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 PAX4O43316 350 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 PDE6DO43924 150 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 CD5P06127 495 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 ATP6V0BQ99437 205 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 SPATA25Q9BR10 227 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 SAMD10Q9BYL1 202 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 A0A0J9YX75 114 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 G3V3Q6 166 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 UBE2L6O14933 153 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 IGHV3-30P01768 117 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 IGHV3-33P01772 117 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 IGHV3-30-3P0DP02 117 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 IGHV3-30-5P0DP03 117 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 ZNF114Q8NC26 417 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 IGLV10-54A0A075B6I4 117 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 A8MWL6 223 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 K7EMT4 169 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 RAB4AP20338 218 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 C1orf194Q5T5A4 169 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 ZNRF2Q8NHG8 242 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 SUN5Q8TC36 379 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 MSRB1Q9NZV6 116 aa5.36□□□□□ -1.55
MSH6-209ENST00000538136 A0A1W2PRE2 83 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 A8MWP6 167 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 RNASE13Q5GAN3 156 aaKnown RBP5.35□□□□□ -1.55
MSH6-209ENST00000538136 Q6ZTC4 211 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 OR10AG1Q8NH19 301 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 C2CD4CQ8TF44 421 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 ADARB2-AS1A8MUL3 147 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 CMC4P56277 68 aaPredicted RBP5.35□□□□□ -1.55
MSH6-209ENST00000538136 LYZL1Q6UWQ5 148 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 C18orf15Q96N68 181 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 LECT2O14960 151 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 P0DMU3 169 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 FAM231AP0DMU4 169 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 FAM231CP0DMU5 169 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 PMCHP20382 165 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 ZC2HC1AQ96GY0 325 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 FAM167A-AS1Q96KT0 104 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 TOMM7Q9P0U1 55 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 U3KQK5 164 aa5.35□□□□□ -1.55
MSH6-209ENST00000538136 S100A2P29034 98 aa5.34□□□□□ -1.55
MSH6-209ENST00000538136 C9JQL5 133 aa5.34□□□□□ -1.55
MSH6-209ENST00000538136 IFITM2Q01629 132 aa5.34□□□□□ -1.55
MSH6-209ENST00000538136 NUDT10Q8NFP7 164 aa5.34□□□□□ -1.55
MSH6-209ENST00000538136 NUDT11Q96G61 164 aa5.34□□□□□ -1.55
MSH6-209ENST00000538136 NKX6-2Q9C056 277 aaPredicted RBP5.34□□□□□ -1.55
MSH6-209ENST00000538136 BIN3Q9NQY0 253 aa5.34□□□□□ -1.55
MSH6-209ENST00000538136 NAT8Q9UHE5 227 aa5.34□□□□□ -1.55
MSH6-209ENST00000538136 RBMY1BA6NDE4 496 aaKnown RBP5.34□□□□□ -1.55
MSH6-209ENST00000538136 RBMY1EA6NEQ0 496 aaKnown RBP5.34□□□□□ -1.55
MSH6-209ENST00000538136 RBMY1DP0C7P1 496 aaKnown RBP5.34□□□□□ -1.55
MSH6-209ENST00000538136 GYPEP15421 78 aa5.34□□□□□ -1.55
MSH6-209ENST00000538136 SVBPQ8N300 66 aa5.34□□□□□ -1.55
MSH6-209ENST00000538136 BTF3L4Q96K17 158 aa5.34□□□□□ -1.55
MSH6-209ENST00000538136 A0A0U1RRA0 63 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 C7orf77A4D0Y5 90 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 Q8N2B8 174 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 ZNF503Q96F45 646 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 KCNS1Q96KK3 526 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 SNAPINO95295 136 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 DCANP1Q8TF63 244 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 HLA-DRB4P13762 266 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 ZNF80P51504 273 aaPredicted RBP5.33□□□□□ -1.56
MSH6-209ENST00000538136 GAGE6Q13070 117 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 HLA-DRB4X5D2U9 266 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 TRGV11A0A075B6L2 103 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 LGALS9O00182 355 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 Q86TA4 180 aa5.33□□□□□ -1.56
MSH6-209ENST00000538136 TMEM218A2RU14 115 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 SRIP30626 198 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 EIF4E3Q8N5X7 224 aaKnown RBP5.32□□□□□ -1.56
MSH6-209ENST00000538136 RNF183Q96D59 192 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 TRAV8-2A0A0B4J237 113 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 ATP5G1P05496 136 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 GATA1P15976 413 aaPredicted RBP5.32□□□□□ -1.56
MSH6-209ENST00000538136 RIGQ13278 110 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 FA2HQ7L5A8 372 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 UBE2WQ96B02 151 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 LOC100131303A0A0U1RQF7 123 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 PRSS46E5RG02 174 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 SRP19P09132 144 aaKnown RBP5.32□□□□□ -1.56
MSH6-209ENST00000538136 AMN1Q8IY45 258 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 SFRP2Q96HF1 295 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 FMC1Q96HJ9 113 aa5.32□□□□□ -1.56
MSH6-209ENST00000538136 ZNF479Q96JC4 524 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms