RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 HIST1H4GQ99525 98 aa9.3□□□□□ -0.92
CPSF7-218ENST00000537641 SIGMAR1Q99720 223 aa9.3□□□□□ -0.92
CPSF7-218ENST00000537641 HIVEP3Q5T1R4 2406 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 COL6A6A6NMZ7 2263 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 IGHV3OR16-8A0A075B7F1 116 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 TRBV7-1A0A0A6YYK4 115 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 MYMXA0A1B0GTQ4 84 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 CIDEAO60543 219 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 CLEC3BP05452 202 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 ECSCRQ19T08 205 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 CD300EQ496F6 205 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-218ENST00000537641 C9orf139Q6ZV77 190 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 TOMM6Q96B49 74 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 CCDC140Q96MF4 163 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 SPATA25Q9BR10 227 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 C20orf78Q9BR46 151 aa9.29□□□□□ -0.92
CPSF7-218ENST00000537641 TRAV26-2A0A0B4J265 109 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 IGHV3-35A0A0C4DH35 117 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 A0A1W2PPR1 153 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 M0R381 172 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 ATP6V0E1O15342 81 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 MED14OSP0DP75 135 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 EFNA4P52798 201 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 SIRPDQ9H106 197 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 ZZEF1O43149 2961 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 CENPVL3A0A0U1RRI6 287 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 H3BVH4 76 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 NEXN-AS1Q8NBZ9 246 aa9.28□□□□□ -0.92
CPSF7-218ENST00000537641 GAGE12HA6NDE8 117 aa9.27□□□□□ -0.93
CPSF7-218ENST00000537641 AZU1P20160 251 aa9.27□□□□□ -0.93
CPSF7-218ENST00000537641 SUMO2P61956 95 aaKnown RBP9.27□□□□□ -0.93
CPSF7-218ENST00000537641 WFDC2Q14508 124 aa9.27□□□□□ -0.93
CPSF7-218ENST00000537641 GAGE13Q4V321 117 aa9.27□□□□□ -0.93
CPSF7-218ENST00000537641 CLEC19AQ6UXS0 136 aa9.27□□□□□ -0.93
CPSF7-218ENST00000537641 ITLN2Q8WWU7 325 aaPredicted RBP9.27□□□□□ -0.93
CPSF7-218ENST00000537641 SCGB3A1Q96QR1 104 aa9.27□□□□□ -0.93
CPSF7-218ENST00000537641 DPH3P1Q9H4G8 78 aa9.27□□□□□ -0.93
CPSF7-218ENST00000537641 UBTD1Q9HAC8 227 aa9.27□□□□□ -0.93
CPSF7-218ENST00000537641 PRO0461Q9UI25 63 aa9.27□□□□□ -0.93
CPSF7-218ENST00000537641 TSSC4Q9Y5U2 329 aaPredicted RBP9.27□□□□□ -0.93
CPSF7-218ENST00000537641 IGHV3-66A0A0C4DH42 116 aa9.26□□□□□ -0.93
CPSF7-218ENST00000537641 TMEM238LA0A1B0GVL6 79 aa9.26□□□□□ -0.93
CPSF7-218ENST00000537641 A6NJY4 79 aa9.26□□□□□ -0.93
CPSF7-218ENST00000537641 ZFP36P26651 326 aaKnown RBP9.26□□□□□ -0.93
CPSF7-218ENST00000537641 LINC00477Q96M19 166 aa9.26□□□□□ -0.93
CPSF7-218ENST00000537641 TACC2O95359 2948 aa9.26□□□□□ -0.93
CPSF7-218ENST00000537641 RELNP78509 3460 aa9.26□□□□□ -0.93
CPSF7-218ENST00000537641 SPTBN1Q01082 2364 aaKnown RBP9.26□□□□□ -0.93
CPSF7-218ENST00000537641 TRAV21A0A0B4J279 112 aa9.25□□□□□ -0.93
CPSF7-218ENST00000537641 PPP1R17O96001 155 aa9.25□□□□□ -0.93
CPSF7-218ENST00000537641 LGALS1P09382 135 aaKnown RBP9.25□□□□□ -0.93
CPSF7-218ENST00000537641 UBE2E1P51965 193 aa9.25□□□□□ -0.93
CPSF7-218ENST00000537641 ATP6V0E2Q8NHE4 81 aa9.25□□□□□ -0.93
CPSF7-218ENST00000537641 GLMPQ8WWB7 406 aa9.25□□□□□ -0.93
CPSF7-218ENST00000537641 C16orf92Q96LL3 132 aa9.25□□□□□ -0.93
CPSF7-218ENST00000537641 LINC01549A6NIU2 74 aa9.25□□□□□ -0.93
CPSF7-218ENST00000537641 H3BMG7 143 aa9.25□□□□□ -0.93
CPSF7-218ENST00000537641 OVOL1O14753 267 aa9.25□□□□□ -0.93
CPSF7-218ENST00000537641 PRR9Q5T870 116 aa9.25□□□□□ -0.93
CPSF7-218ENST00000537641 RASL10AQ92737 203 aa9.25□□□□□ -0.93
CPSF7-218ENST00000537641 CHD8Q9HCK8 2581 aa9.24□□□□□ -0.93
CPSF7-218ENST00000537641 HOXA3O43365 443 aaPredicted RBP9.24□□□□□ -0.93
CPSF7-218ENST00000537641 ASIPP42127 132 aa9.24□□□□□ -0.93
CPSF7-218ENST00000537641 BAALCQ8WXS3 180 aa9.24□□□□□ -0.93
CPSF7-218ENST00000537641 SPAG8Q99932 426 aaPredicted RBP9.24□□□□□ -0.93
CPSF7-218ENST00000537641 GTSF1LQ9H1H1 148 aa9.24□□□□□ -0.93
CPSF7-218ENST00000537641 NCOR2Q9Y618 2525 aa9.24□□□□□ -0.93
CPSF7-218ENST00000537641 IGHV1-69DA0A0B4J2H0 117 aa9.23□□□□□ -0.93
CPSF7-218ENST00000537641 RPL32P62910 135 aaKnown RBP9.23□□□□□ -0.93
CPSF7-218ENST00000537641 ATP5G2Q06055 141 aa9.23□□□□□ -0.93
CPSF7-218ENST00000537641 MORN3Q6PF18 240 aaPredicted RBP9.23□□□□□ -0.93
CPSF7-218ENST00000537641 C2orf66Q6UXQ4 117 aa9.23□□□□□ -0.93
CPSF7-218ENST00000537641 POM121L12Q8N7R1 296 aa9.23□□□□□ -0.93
CPSF7-218ENST00000537641 SPOCK3Q9BQ16 436 aa9.23□□□□□ -0.93
CPSF7-218ENST00000537641 ITPR1Q14643 2758 aa9.23□□□□□ -0.93
CPSF7-218ENST00000537641 IGHV3OR16-13A0A075B7E8 117 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 IGHV3-74A0A0B4J1X5 117 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 FAM223BA6NKX1 122 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 RNF223E7ERA6 249 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 NDUFS8O00217 210 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 CRIP2P52943 208 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-218ENST00000537641 ETDBQ3ZM63 59 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 PAPPA-AS1Q5QFB9 102 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 LYRM7Q5U5X0 104 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 FAM223AQ8IWN6 122 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 ZFAND2AQ8N6M9 145 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 OR10J6PQ8NGY7 276 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 AJUBAQ96IF1 538 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 PRADC1Q9BSG0 188 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 IGHV3-49A0A0A0MS15 119 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 TRBV7-9A0A0J9YWB2 115 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 GNLYP22749 145 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 S100A4P26447 101 aaKnown RBP9.22□□□□□ -0.93
CPSF7-218ENST00000537641 UBE2D1P51668 147 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 SCGB2A2Q13296 93 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 SH2D6Q7Z4S9 175 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 APRG1Q8IVJ8 170 aa9.22□□□□□ -0.93
CPSF7-218ENST00000537641 DLX4Q92988 240 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-218ENST00000537641 WNK2Q9Y3S1 2297 aa9.21□□□□□ -0.93
CPSF7-218ENST00000537641 A0A1B0GV72 72 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms