RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 OR9G4Q8NGQ1 327 aa16.98■□□□□ 0.31
HMGA2-206ENST00000536545 ODF3Q96PU9 254 aa16.98■□□□□ 0.31
HMGA2-206ENST00000536545 C16orf95Q9H693 158 aa16.98■□□□□ 0.31
HMGA2-206ENST00000536545 A0A0J9YX75 114 aa16.97■□□□□ 0.31
HMGA2-206ENST00000536545 RNASE4P34096 147 aaKnown RBP16.97■□□□□ 0.31
HMGA2-206ENST00000536545 HIST2H2BDQ6DRA6 164 aa16.97■□□□□ 0.31
HMGA2-206ENST00000536545 OR10AG1Q8NH19 301 aa16.97■□□□□ 0.31
HMGA2-206ENST00000536545 PEMTQ9UBM1 199 aa16.97■□□□□ 0.31
HMGA2-206ENST00000536545 RNF185Q96GF1 192 aa16.97■□□□□ 0.31
HMGA2-206ENST00000536545 NF1P21359 2839 aa16.97■□□□□ 0.31
HMGA2-206ENST00000536545 IGHV4-4A0A075B6R2 117 aa16.96■□□□□ 0.31
HMGA2-206ENST00000536545 M0R2Z0 102 aa16.96■□□□□ 0.31
HMGA2-206ENST00000536545 HILS1P60008 231 aa16.96■□□□□ 0.31
HMGA2-206ENST00000536545 ORMDL3Q8N138 153 aa16.96■□□□□ 0.31
HMGA2-206ENST00000536545 DLX4Q92988 240 aaPredicted RBP16.96■□□□□ 0.31
HMGA2-206ENST00000536545 SMR3AQ99954 134 aa16.96■□□□□ 0.31
HMGA2-206ENST00000536545 LINC00587B1AMM8 73 aa16.95■□□□□ 0.3
HMGA2-206ENST00000536545 LINC00614P0C842 121 aa16.95■□□□□ 0.3
HMGA2-206ENST00000536545 Q8N976 141 aa16.95■□□□□ 0.3
HMGA2-206ENST00000536545 H3BVH4 76 aa16.94■□□□□ 0.3
HMGA2-206ENST00000536545 KRTDAPP60985 99 aa16.94■□□□□ 0.3
HMGA2-206ENST00000536545 PKIAP61925 76 aa16.94■□□□□ 0.3
HMGA2-206ENST00000536545 ANXA2RQ3ZCQ2 193 aa16.94■□□□□ 0.3
HMGA2-206ENST00000536545 ZNF418Q8TF45 676 aaPredicted RBP16.94■□□□□ 0.3
HMGA2-206ENST00000536545 PRELID3AQ96N28 172 aa16.94■□□□□ 0.3
HMGA2-206ENST00000536545 IGHV1-24A0A0C4DH33 117 aa16.94■□□□□ 0.3
HMGA2-206ENST00000536545 CSN3P07498 182 aa16.94■□□□□ 0.3
HMGA2-206ENST00000536545 CD28P10747 220 aa16.94■□□□□ 0.3
HMGA2-206ENST00000536545 CACNG7P62955 275 aa16.94■□□□□ 0.3
HMGA2-206ENST00000536545 LINC01006Q8NI28 216 aa16.94■□□□□ 0.3
HMGA2-206ENST00000536545 RAB4AP20338 218 aa16.93■□□□□ 0.3
HMGA2-206ENST00000536545 LEPP41159 167 aa16.93■□□□□ 0.3
HMGA2-206ENST00000536545 FHL3Q13643 280 aa16.93■□□□□ 0.3
HMGA2-206ENST00000536545 RAX2Q96IS3 184 aa16.93■□□□□ 0.3
HMGA2-206ENST00000536545 TRAV2A0A0B4J234 112 aa16.92■□□□□ 0.3
HMGA2-206ENST00000536545 C3orf79P0CE67 100 aa16.92■□□□□ 0.3
HMGA2-206ENST00000536545 MED14OSP0DP75 135 aa16.92■□□□□ 0.3
HMGA2-206ENST00000536545 TEX43Q6ZNM6 134 aa16.92■□□□□ 0.3
HMGA2-206ENST00000536545 ZNF664Q8N3J9 261 aa16.92■□□□□ 0.3
HMGA2-206ENST00000536545 OTOGQ6ZRI0 2925 aa16.92■□□□□ 0.3
HMGA2-206ENST00000536545 ASIPP42127 132 aa16.92■□□□□ 0.3
HMGA2-206ENST00000536545 PMCHL1Q16048 86 aa16.92■□□□□ 0.3
HMGA2-206ENST00000536545 EBLN2Q6P2I7 272 aa16.92■□□□□ 0.3
HMGA2-206ENST00000536545 FOXI2Q6ZQN5 318 aa16.92■□□□□ 0.3
HMGA2-206ENST00000536545 SMKR1H3BMG3 65 aa16.91■□□□□ 0.3
HMGA2-206ENST00000536545 PRO1933Q9H354 126 aa16.91■□□□□ 0.3
HMGA2-206ENST00000536545 LY6G6DO95868 133 aa16.9■□□□□ 0.3
HMGA2-206ENST00000536545 NCR2O95944 276 aa16.9■□□□□ 0.3
HMGA2-206ENST00000536545 CKS2P33552 79 aa16.9■□□□□ 0.3
HMGA2-206ENST00000536545 TMEM61Q8N0U2 210 aa16.9■□□□□ 0.3
HMGA2-206ENST00000536545 C11orf44Q8N8P7 122 aa16.9■□□□□ 0.3
HMGA2-206ENST00000536545 SCRT2Q9NQ03 307 aa16.9■□□□□ 0.3
HMGA2-206ENST00000536545 CUBNO60494 3623 aa16.9■□□□□ 0.3
HMGA2-206ENST00000536545 C7orf71A4D174 169 aa16.89■□□□□ 0.3
HMGA2-206ENST00000536545 TSTD3H0UI37 97 aa16.89■□□□□ 0.3
HMGA2-206ENST00000536545 DUSP14O95147 198 aaKnown RBP16.89■□□□□ 0.3
HMGA2-206ENST00000536545 NPYP01303 97 aa16.89■□□□□ 0.3
HMGA2-206ENST00000536545 PPBPP02775 128 aa16.89■□□□□ 0.3
HMGA2-206ENST00000536545 SPANXN1Q5VSR9 72 aa16.89■□□□□ 0.3
HMGA2-206ENST00000536545 SIGLEC8Q9NYZ4 499 aa16.89■□□□□ 0.29
HMGA2-206ENST00000536545 HIVEP2P31629 2446 aa16.89■□□□□ 0.29
HMGA2-206ENST00000536545 A0A1W2PRX2 142 aa16.88■□□□□ 0.29
HMGA2-206ENST00000536545 NDUFA7O95182 113 aa16.88■□□□□ 0.29
HMGA2-206ENST00000536545 EVI2AP22794 236 aa16.88■□□□□ 0.29
HMGA2-206ENST00000536545 FA2HQ7L5A8 372 aa16.88■□□□□ 0.29
HMGA2-206ENST00000536545 DYNLRB2Q8TF09 96 aa16.88■□□□□ 0.29
HMGA2-206ENST00000536545 CITED2Q99967 270 aaPredicted RBP16.88■□□□□ 0.29
HMGA2-206ENST00000536545 AP5S1Q9NUS5 200 aa16.88■□□□□ 0.29
HMGA2-206ENST00000536545 NOTCH2Q04721 2471 aa16.87■□□□□ 0.29
HMGA2-206ENST00000536545 RNASE3P12724 160 aaKnown RBP16.87■□□□□ 0.29
HMGA2-206ENST00000536545 IFI27P40305 119 aaPredicted RBP16.87■□□□□ 0.29
HMGA2-206ENST00000536545 AMTNQ6UX39 209 aa16.87■□□□□ 0.29
HMGA2-206ENST00000536545 PRSS3P2Q8NHM4 247 aa16.87■□□□□ 0.29
HMGA2-206ENST00000536545 TIMM8BQ9Y5J9 83 aaPredicted RBP16.87■□□□□ 0.29
HMGA2-206ENST00000536545 TSSC4Q9Y5U2 329 aaPredicted RBP16.87■□□□□ 0.29
HMGA2-206ENST00000536545 KIR2DL5BA0A0G2JN68 375 aa16.87■□□□□ 0.29
HMGA2-206ENST00000536545 KIR2DL5BA0A0G2JPC4 375 aa16.87■□□□□ 0.29
HMGA2-206ENST00000536545 S100A4P26447 101 aaKnown RBP16.87■□□□□ 0.29
HMGA2-206ENST00000536545 SMIM15Q7Z3B0 74 aa16.87■□□□□ 0.29
HMGA2-206ENST00000536545 KIR2DL5AQ8N109 375 aa16.87■□□□□ 0.29
HMGA2-206ENST00000536545 LAMTOR2Q9Y2Q5 125 aa16.87■□□□□ 0.29
HMGA2-206ENST00000536545 CCL24O00175 119 aa16.86■□□□□ 0.29
HMGA2-206ENST00000536545 GNRH2O43555 120 aa16.86■□□□□ 0.29
HMGA2-206ENST00000536545 IGKV3-20P01619 116 aa16.86■□□□□ 0.29
HMGA2-206ENST00000536545 DEFB114Q30KQ6 69 aa16.86■□□□□ 0.29
HMGA2-206ENST00000536545 TRAV12-3A0A0B4J271 114 aa16.85■□□□□ 0.29
HMGA2-206ENST00000536545 A8MTW9 85 aa16.85■□□□□ 0.29
HMGA2-206ENST00000536545 GAS8-AS1O95177 125 aa16.85■□□□□ 0.29
HMGA2-206ENST00000536545 LOC389332A0A1B0GUA5 103 aa16.84■□□□□ 0.29
HMGA2-206ENST00000536545 NXPH4O95158 308 aa16.84■□□□□ 0.29
HMGA2-206ENST00000536545 TSPOP30536 169 aa16.84■□□□□ 0.29
HMGA2-206ENST00000536545 CDKN1BP46527 198 aa16.84■□□□□ 0.29
HMGA2-206ENST00000536545 TDRG1Q3Y452 100 aa16.84■□□□□ 0.29
HMGA2-206ENST00000536545 TCF21O43680 179 aa16.84■□□□□ 0.29
HMGA2-206ENST00000536545 BTF3P20290 206 aaKnown RBP16.84■□□□□ 0.29
HMGA2-206ENST00000536545 DEFB131AP59861 70 aa16.84■□□□□ 0.29
HMGA2-206ENST00000536545 FAM159AQ6UWV7 190 aa16.84■□□□□ 0.29
HMGA2-206ENST00000536545 LINC00173Q6ZV60 143 aa16.84■□□□□ 0.29
HMGA2-206ENST00000536545 PHLDA3Q9Y5J5 127 aa16.84■□□□□ 0.29
HMGA2-206ENST00000536545 LEPROTL1O95214 131 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms