RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 KCNS1Q96KK3 526 aa8.99□□□□□ -0.97
RTN3-207ENST00000536011 NDFIP1Q9BT67 221 aa8.99□□□□□ -0.97
RTN3-207ENST00000536011 LY96Q9Y6Y9 160 aa8.99□□□□□ -0.97
RTN3-207ENST00000536011 TRAV4A0A0B4J268 109 aa8.98□□□□□ -0.97
RTN3-207ENST00000536011 K7EQM0 130 aa8.98□□□□□ -0.97
RTN3-207ENST00000536011 M0R2P5 195 aa8.98□□□□□ -0.97
RTN3-207ENST00000536011 OR4C5Q8NGB2 326 aa8.98□□□□□ -0.97
RTN3-207ENST00000536011 OR10G9Q8NGN4 311 aa8.98□□□□□ -0.97
RTN3-207ENST00000536011 OR10G7Q8NGN6 311 aa8.98□□□□□ -0.97
RTN3-207ENST00000536011 SDF2L1Q9HCN8 221 aa8.98□□□□□ -0.97
RTN3-207ENST00000536011 TREM1Q9NP99 234 aa8.98□□□□□ -0.97
RTN3-207ENST00000536011 APOBP04114 4563 aaKnown RBP8.97□□□□□ -0.97
RTN3-207ENST00000536011 K7EQD1 137 aa8.97□□□□□ -0.97
RTN3-207ENST00000536011 SFTA3P0C7M3 94 aa8.97□□□□□ -0.97
RTN3-207ENST00000536011 GYPEP15421 78 aa8.97□□□□□ -0.97
RTN3-207ENST00000536011 EVI2AP22794 236 aa8.97□□□□□ -0.97
RTN3-207ENST00000536011 CDPF1Q6NVV7 123 aa8.97□□□□□ -0.97
RTN3-207ENST00000536011 Q6ZRN7 208 aaPredicted RBP8.97□□□□□ -0.97
RTN3-207ENST00000536011 ZNF479Q96JC4 524 aa8.97□□□□□ -0.97
RTN3-207ENST00000536011 MBP02144 154 aa8.96□□□□□ -0.98
RTN3-207ENST00000536011 CDC34P49427 236 aaPredicted RBP8.96□□□□□ -0.98
RTN3-207ENST00000536011 KRTAP10-2P60368 255 aa8.96□□□□□ -0.98
RTN3-207ENST00000536011 RAB2AP61019 212 aa8.96□□□□□ -0.98
RTN3-207ENST00000536011 Q8N1X5 172 aa8.96□□□□□ -0.98
RTN3-207ENST00000536011 C10orf126Q8N4M7 172 aa8.96□□□□□ -0.98
RTN3-207ENST00000536011 OR2G3Q8NGZ4 309 aa8.96□□□□□ -0.98
RTN3-207ENST00000536011 ASB13Q8WXK3 278 aa8.96□□□□□ -0.98
RTN3-207ENST00000536011 WFDC1Q9HC57 220 aa8.96□□□□□ -0.98
RTN3-207ENST00000536011 IGHV3-16A0A0C4DH30 117 aa8.95□□□□□ -0.98
RTN3-207ENST00000536011 F6UZH7 168 aa8.95□□□□□ -0.98
RTN3-207ENST00000536011 ARL14EPLP0DKL9 152 aa8.95□□□□□ -0.98
RTN3-207ENST00000536011 ZFP69Q49AA0 526 aa8.95□□□□□ -0.98
RTN3-207ENST00000536011 C5orf17Q8NAS9 161 aa8.95□□□□□ -0.98
RTN3-207ENST00000536011 PSMG3Q9BT73 122 aaPredicted RBP8.95□□□□□ -0.98
RTN3-207ENST00000536011 TRAV8-1A0A0A6YYK1 113 aa8.94□□□□□ -0.98
RTN3-207ENST00000536011 FBLL1A6NHQ2 334 aaKnown RBP8.94□□□□□ -0.98
RTN3-207ENST00000536011 CIDEAO60543 219 aa8.94□□□□□ -0.98
RTN3-207ENST00000536011 EIF3GO75821 320 aaKnown RBP eCLIP8.94□□□□□ -0.981e-11■■■□□ 15.7
RTN3-207ENST00000536011 DNAH10OSP0CZ25 163 aa8.94□□□□□ -0.98
RTN3-207ENST00000536011 NHLRC2Q8NBF2 726 aa8.94□□□□□ -0.98
RTN3-207ENST00000536011 KRTAP4-5Q9BYR2 181 aa8.94□□□□□ -0.98
RTN3-207ENST00000536011 SCRT2Q9NQ03 307 aa8.94□□□□□ -0.98
RTN3-207ENST00000536011 MSRB1Q9NZV6 116 aa8.94□□□□□ -0.98
RTN3-207ENST00000536011 HMGB3O15347 200 aaKnown RBP8.93□□□□□ -0.98
RTN3-207ENST00000536011 GNRH2O43555 120 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 TYMSP04818 313 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 STAG3L2P0CL84 134 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 STAG3L3P0CL85 134 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 PPT1P50897 306 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 TIRAPP58753 221 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 GNG5P63218 68 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 SERF2P84101 59 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 HSD17B11Q8NBQ5 300 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 RAB24Q969Q5 203 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 AQP10Q96PS8 301 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 BATF3Q9NR55 127 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 TMEM167BQ9NRX6 74 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 ALG5Q9Y673 324 aa8.93□□□□□ -0.98
RTN3-207ENST00000536011 TAAR5O14804 337 aa8.92□□□□□ -0.98
RTN3-207ENST00000536011 PTTG1O95997 202 aa8.92□□□□□ -0.98
RTN3-207ENST00000536011 CXorf1O96002 111 aa8.92□□□□□ -0.98
RTN3-207ENST00000536011 TCRAP04437 139 aa8.92□□□□□ -0.98
RTN3-207ENST00000536011 CRYGDP07320 174 aa8.92□□□□□ -0.98
RTN3-207ENST00000536011 GCHFRP30047 84 aa8.92□□□□□ -0.98
RTN3-207ENST00000536011 ZNF876PQ49A33 203 aa8.92□□□□□ -0.98
RTN3-207ENST00000536011 WFDC10BQ8IUB3 73 aa8.92□□□□□ -0.98
RTN3-207ENST00000536011 MED28Q9H204 178 aa8.92□□□□□ -0.98
RTN3-207ENST00000536011 GCGP01275 180 aa8.91□□□□□ -0.98
RTN3-207ENST00000536011 PFN1P07737 140 aaKnown RBP8.91□□□□□ -0.98
RTN3-207ENST00000536011 GATA1P15976 413 aaPredicted RBP8.91□□□□□ -0.98
RTN3-207ENST00000536011 SMUG1Q53HV7 270 aa8.91□□□□□ -0.98
RTN3-207ENST00000536011 CYB561D1Q8N8Q1 229 aa8.91□□□□□ -0.98
RTN3-207ENST00000536011 INO80EQ8NBZ0 244 aaPredicted RBP8.91□□□□□ -0.98
RTN3-207ENST00000536011 TVP23CQ96ET8 276 aa8.91□□□□□ -0.98
RTN3-207ENST00000536011 PRADC1Q9BSG0 188 aa8.91□□□□□ -0.98
RTN3-207ENST00000536011 ACTR3CQ9C0K3 210 aaPredicted RBP8.91□□□□□ -0.98
RTN3-207ENST00000536011 A0A087WTM6 91 aa8.9□□□□□ -0.98
RTN3-207ENST00000536011 TRAV8-6A0A0B4J262 113 aa8.9□□□□□ -0.98
RTN3-207ENST00000536011 IGHV3-38A0A0C4DH36 116 aa8.9□□□□□ -0.98
RTN3-207ENST00000536011 ATP6V0CP27449 155 aa8.9□□□□□ -0.98
RTN3-207ENST00000536011 FLI1Q01543 452 aaPredicted RBP8.9□□□□□ -0.98
RTN3-207ENST00000536011 RHOHQ15669 191 aa8.9□□□□□ -0.98
RTN3-207ENST00000536011 SAPCD1Q5SSQ6 148 aa8.9□□□□□ -0.98
RTN3-207ENST00000536011 TMEM75Q8N9X5 138 aa8.9□□□□□ -0.98
RTN3-207ENST00000536011 SUN5Q8TC36 379 aa8.9□□□□□ -0.98
RTN3-207ENST00000536011 SH3BGRL3Q9H299 93 aa8.9□□□□□ -0.98
RTN3-207ENST00000536011 TNFSF18Q9UNG2 199 aa8.9□□□□□ -0.98
RTN3-207ENST00000536011 PSG8Q9UQ74 426 aa8.9□□□□□ -0.98
RTN3-207ENST00000536011 BORCS7-ASMTA0A0B4J1R7 106 aa8.89□□□□□ -0.99
RTN3-207ENST00000536011 TRBV6-4A0A1B0GX49 114 aa8.89□□□□□ -0.99
RTN3-207ENST00000536011 PSCAO43653 123 aa8.89□□□□□ -0.99
RTN3-207ENST00000536011 SUMO1P63165 101 aaKnown RBP8.89□□□□□ -0.99
RTN3-207ENST00000536011 PTH2Q96A98 100 aa8.89□□□□□ -0.99
RTN3-207ENST00000536011 SGK494Q96LW2 274 aa8.89□□□□□ -0.99
RTN3-207ENST00000536011 EPDR1Q9UM22 224 aa8.89□□□□□ -0.99
RTN3-207ENST00000536011 TNFRSF18Q9Y5U5 241 aa8.89□□□□□ -0.99
RTN3-207ENST00000536011 A0A1W2PRE2 83 aa8.88□□□□□ -0.99
RTN3-207ENST00000536011 GGTLC3B5MD39 225 aa8.88□□□□□ -0.99
RTN3-207ENST00000536011 RS1O15537 224 aa8.88□□□□□ -0.99
RTN3-207ENST00000536011 GIPP09681 153 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms