RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 CT83Q5H943 113 aa11.78□□□□□ -0.52
VAMP1-205ENST00000535927 IBA57Q5T440 356 aaKnown RBP11.78□□□□□ -0.52
VAMP1-205ENST00000535927 SBSPONQ8IVN8 264 aa11.78□□□□□ -0.52
VAMP1-205ENST00000535927 SLC7A5P1Q8MH63 180 aa11.78□□□□□ -0.52
VAMP1-205ENST00000535927 NHLRC2Q8NBF2 726 aa11.78□□□□□ -0.52
VAMP1-205ENST00000535927 ISOC2Q96AB3 205 aa11.78□□□□□ -0.52
VAMP1-205ENST00000535927 OVOL2Q9BRP0 275 aa11.78□□□□□ -0.52
VAMP1-205ENST00000535927 K7EN84 100 aa11.77□□□□□ -0.53
VAMP1-205ENST00000535927 ORM1P02763 201 aa11.77□□□□□ -0.53
VAMP1-205ENST00000535927 ERVFC1-1P60608 527 aa11.77□□□□□ -0.53
VAMP1-205ENST00000535927 ADIRFQ15847 76 aa11.77□□□□□ -0.53
VAMP1-205ENST00000535927 OR11H2Q8NH07 326 aa11.77□□□□□ -0.53
VAMP1-205ENST00000535927 TMEM263Q8WUH6 116 aaKnown RBP11.77□□□□□ -0.53
VAMP1-205ENST00000535927 C16orf74Q96GX8 76 aa11.77□□□□□ -0.53
VAMP1-205ENST00000535927 FAM231BA6NCW3 169 aa11.76□□□□□ -0.53
VAMP1-205ENST00000535927 PGPEP1LA6NFU8 196 aa11.76□□□□□ -0.53
VAMP1-205ENST00000535927 MT-ND4LP03901 98 aa11.76□□□□□ -0.53
VAMP1-205ENST00000535927 PRR27Q6MZM9 219 aa11.76□□□□□ -0.53
VAMP1-205ENST00000535927 NUDT10Q8NFP7 164 aa11.76□□□□□ -0.53
VAMP1-205ENST00000535927 ANAPC16Q96DE5 110 aa11.76□□□□□ -0.53
VAMP1-205ENST00000535927 NUDT11Q96G61 164 aa11.76□□□□□ -0.53
VAMP1-205ENST00000535927 SFRP2Q96HF1 295 aa11.76□□□□□ -0.53
VAMP1-205ENST00000535927 TEX48A0A1B0GUV7 120 aa11.75□□□□□ -0.53
VAMP1-205ENST00000535927 CBY3A6NI87 242 aa11.75□□□□□ -0.53
VAMP1-205ENST00000535927 A8MWL6 223 aa11.75□□□□□ -0.53
VAMP1-205ENST00000535927 GATCO43716 136 aaKnown RBP11.75□□□□□ -0.53
VAMP1-205ENST00000535927 RBMY1A1P0DJD3 496 aaKnown RBP11.75□□□□□ -0.53
VAMP1-205ENST00000535927 RBMY1CP0DJD4 496 aa11.75□□□□□ -0.53
VAMP1-205ENST00000535927 MED14OSP0DP75 135 aa11.75□□□□□ -0.53
VAMP1-205ENST00000535927 OR5I1Q13606 314 aa11.75□□□□□ -0.53
VAMP1-205ENST00000535927 RBMY1FQ15415 496 aaKnown RBP11.75□□□□□ -0.53
VAMP1-205ENST00000535927 SVBPQ8N300 66 aa11.75□□□□□ -0.53
VAMP1-205ENST00000535927 OR10G8Q8NGN5 311 aa11.75□□□□□ -0.53
VAMP1-205ENST00000535927 SPXQ9BT56 116 aa11.75□□□□□ -0.53
VAMP1-205ENST00000535927 NDUFAF3Q9BU61 184 aa11.75□□□□□ -0.53
VAMP1-205ENST00000535927 A0A1W2PPQ1 181 aa11.74□□□□□ -0.53
VAMP1-205ENST00000535927 ADCYAP1P18509 176 aa11.74□□□□□ -0.53
VAMP1-205ENST00000535927 PIK3CD-AS1Q5SR53 167 aa11.74□□□□□ -0.53
VAMP1-205ENST00000535927 PTH2Q96A98 100 aa11.74□□□□□ -0.53
VAMP1-205ENST00000535927 CTDSP1Q9GZU7 261 aa11.74□□□□□ -0.53
VAMP1-205ENST00000535927 GFRA4Q9GZZ7 299 aa11.74□□□□□ -0.53
VAMP1-205ENST00000535927 RPP21Q9H633 154 aaKnown RBP11.74□□□□□ -0.53
VAMP1-205ENST00000535927 TMEM242Q9NWH2 141 aa11.74□□□□□ -0.53
VAMP1-205ENST00000535927 X6R8D5 127 aa11.74□□□□□ -0.53
VAMP1-205ENST00000535927 IGHV3OR16-12A0A075B7B8 117 aa11.73□□□□□ -0.53
VAMP1-205ENST00000535927 IGKV3D-20A0A0C4DH25 116 aa11.73□□□□□ -0.53
VAMP1-205ENST00000535927 ZNF705GA8MUZ8 300 aaPredicted RBP11.73□□□□□ -0.53
VAMP1-205ENST00000535927 SNAPINO95295 136 aa11.73□□□□□ -0.53
VAMP1-205ENST00000535927 ASIPP42127 132 aa11.73□□□□□ -0.53
VAMP1-205ENST00000535927 ZNF415Q09FC8 603 aa11.73□□□□□ -0.53
VAMP1-205ENST00000535927 RHEBQ15382 184 aa11.73□□□□□ -0.53
VAMP1-205ENST00000535927 OR2D3Q8NGH3 330 aa11.73□□□□□ -0.53
VAMP1-205ENST00000535927 RNASE8Q8TDE3 154 aaKnown RBP11.73□□□□□ -0.53
VAMP1-205ENST00000535927 F2Z2F3 143 aa11.72□□□□□ -0.53
VAMP1-205ENST00000535927 ATP6V1G1O75348 118 aa11.72□□□□□ -0.53
VAMP1-205ENST00000535927 S100A4P26447 101 aaKnown RBP11.72□□□□□ -0.53
VAMP1-205ENST00000535927 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
VAMP1-205ENST00000535927 DAZ2Q13117 558 aaKnown RBP11.72□□□□□ -0.53
VAMP1-205ENST00000535927 WDR73Q6P4I2 378 aa11.72□□□□□ -0.53
VAMP1-205ENST00000535927 RNASE7Q9H1E1 156 aaKnown RBP11.72□□□□□ -0.53
VAMP1-205ENST00000535927 C11orf68Q9H3H3 251 aaKnown RBP11.72□□□□□ -0.53
VAMP1-205ENST00000535927 IL36BQ9NZH7 164 aa11.72□□□□□ -0.53
VAMP1-205ENST00000535927 C11orf21Q9P2W6 132 aa11.72□□□□□ -0.53
VAMP1-205ENST00000535927 NAGKQ9UJ70 344 aa11.72□□□□□ -0.53
VAMP1-205ENST00000535927 A0A087WWC5 75 aa11.71□□□□□ -0.53
VAMP1-205ENST00000535927 IGHV3-16A0A0C4DH30 117 aa11.71□□□□□ -0.53
VAMP1-205ENST00000535927 SNURFLB1AK76 121 aa11.71□□□□□ -0.53
VAMP1-205ENST00000535927 M0R036 132 aa11.71□□□□□ -0.53
VAMP1-205ENST00000535927 TYMSP04818 313 aa11.71□□□□□ -0.53
VAMP1-205ENST00000535927 TCL1AP56279 114 aa11.71□□□□□ -0.53
VAMP1-205ENST00000535927 LGALS9BQ3B8N2 356 aa11.71□□□□□ -0.53
VAMP1-205ENST00000535927 MUC21Q5SSG8 566 aa11.71□□□□□ -0.53
VAMP1-205ENST00000535927 TSKUQ8WUA8 353 aa11.71□□□□□ -0.53
VAMP1-205ENST00000535927 SSBP4Q9BWG4 385 aaPredicted RBP11.71□□□□□ -0.53
VAMP1-205ENST00000535927 TIMM8BQ9Y5J9 83 aaPredicted RBP11.71□□□□□ -0.53
VAMP1-205ENST00000535927 APOC3P02656 99 aa11.7□□□□□ -0.54
VAMP1-205ENST00000535927 OR5AL1P0C617 328 aa11.7□□□□□ -0.54
VAMP1-205ENST00000535927 HTN1P15515 57 aa11.7□□□□□ -0.54
VAMP1-205ENST00000535927 S100A1P23297 94 aa11.7□□□□□ -0.54
VAMP1-205ENST00000535927 Q8NAQ8 132 aa11.7□□□□□ -0.54
VAMP1-205ENST00000535927 IMMP2LQ96T52 175 aa11.7□□□□□ -0.54
VAMP1-205ENST00000535927 V9GYV3 84 aa11.7□□□□□ -0.54
VAMP1-205ENST00000535927 LYRM9A8MSI8 78 aa11.69□□□□□ -0.54
VAMP1-205ENST00000535927 GNRH2O43555 120 aa11.69□□□□□ -0.54
VAMP1-205ENST00000535927 Q6ZQT7 251 aa11.69□□□□□ -0.54
VAMP1-205ENST00000535927 C11orf72Q8NBR9 251 aa11.69□□□□□ -0.54
VAMP1-205ENST00000535927 CLRN3Q8NCR9 226 aa11.69□□□□□ -0.54
VAMP1-205ENST00000535927 KMT2CQ8NEZ4 4911 aaKnown RBP11.68□□□□□ -0.54
VAMP1-205ENST00000535927 SNAI2O43623 268 aa11.68□□□□□ -0.54
VAMP1-205ENST00000535927 RNF212Q495C1 297 aa11.68□□□□□ -0.54
VAMP1-205ENST00000535927 C9orf85Q96MD7 179 aa11.68□□□□□ -0.54
VAMP1-205ENST00000535927 SCRT2Q9NQ03 307 aa11.68□□□□□ -0.54
VAMP1-205ENST00000535927 IGHV4-28A0A0C4DH34 117 aa11.67□□□□□ -0.54
VAMP1-205ENST00000535927 M0R2P5 195 aa11.67□□□□□ -0.54
VAMP1-205ENST00000535927 CIDEAO60543 219 aa11.67□□□□□ -0.54
VAMP1-205ENST00000535927 IGLC6P0CF74 106 aa11.67□□□□□ -0.54
VAMP1-205ENST00000535927 AZU1P20160 251 aa11.67□□□□□ -0.54
VAMP1-205ENST00000535927 CACNG7P62955 275 aa11.67□□□□□ -0.54
VAMP1-205ENST00000535927 RPL19P84098 196 aaKnown RBP11.67□□□□□ -0.54
VAMP1-205ENST00000535927 ZNF575Q86XF7 245 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms