RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 IGKV1-9A0A0C4DH69 117 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 SMIM27A0A1W2PRY6 76 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 A6NIN4 97 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 A6NN06 94 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 C17orf51A8MQB3 221 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 ERC2-IT1O76042 136 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 HMGN2P05204 90 aaKnown RBP2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 IFI6P09912 130 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 CD28P10747 220 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 IFI27P40305 119 aaPredicted RBP2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 RPS21P63220 83 aaKnown RBP2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 CIRBPQ14011 172 aaKnown RBP2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 RBMY1FQ15415 496 aaKnown RBP2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 SS18Q15532 418 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 RHOHQ15669 191 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 ESRGQ1W209 222 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 ATP5EP2Q5VTU8 51 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 LYPD5Q6UWN5 251 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 C16orf47Q6ZP98 133 aaPredicted RBP2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 CLECL1Q8IZS7 167 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 FAM19A2Q8N3H0 131 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 FAM216BQ8N7L0 139 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 ZNF491Q8N8L2 437 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 C11orf1Q9H5F2 150 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 RGPD8O14715 1765 aaPredicted RBP2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 RGPD5Q99666 1765 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 FER1L6Q2WGJ9 1857 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 CCDC88AQ3V6T2 1871 aa2.31□□□□□ -2.04
SPARCL1-208ENST00000535835 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 TRBV7-1A0A0A6YYK4 115 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 CTXND1A0A1B0GTU2 59 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 C3orf84H3BNL1 204 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 PEX7O00628 323 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 FUSP35637 526 aaKnown RBP eCLIP2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 RPL27AP46776 148 aaKnown RBP2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 ZNF138P52744 262 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 RBM3P98179 157 aaKnown RBP2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 ZNF816Q0VGE8 651 aaPredicted RBP2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 EIF4EBP1Q13541 118 aaPredicted RBP2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 S100A7L2Q5SY68 101 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 SPANXN1Q5VSR9 72 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 Q6JHZ5 121 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 VMO1Q7Z5L0 202 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 PRNTQ86SH4 94 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 RPRMLQ8N4K4 120 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 RNASE6Q93091 150 aaKnown RBP2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 CD163L1Q9NR16 1453 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 PLCH1Q4KWH8 1693 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 FMN2Q9NZ56 1722 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 ANKRD31Q8N7Z5 1873 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 DOCK5Q9H7D0 1870 aa2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 TDRD15B5MCY1 1934 aaKnown RBP2.3□□□□□ -2.04
SPARCL1-208ENST00000535835 CITO14578 2027 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 MYO5AQ9Y4I1 1855 aaKnown RBP2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 RGPD2P0DJD1 1756 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 TJP1Q07157 1748 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 RREB1Q92766 1687 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 THSD7AQ9UPZ6 1657 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 COL16A1Q07092 1604 aaPredicted RBP2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 DUOX1Q9NRD9 1551 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 IGLV3-10A0A075B6K4 115 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 IGLV3-32A0A0A0MS00 114 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 A0A0G2JRQ6 117 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 TRBV30A0A0K0K1B3 111 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 CRYM-AS1A6NIL9 109 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 IGHV4-34P06331 123 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 INAFM2P0DMQ5 153 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 IGHV3-43DP0DP04 118 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 SUPT4H1P63272 117 aaKnown RBP2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 PATE2Q6UY27 113 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 ZNF826PQ6ZT77 177 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 WFDC5Q8TCV5 224 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 ITLN1Q8WWA0 313 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 ITLN2Q8WWU7 325 aaPredicted RBP2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 TMEM141Q96I45 108 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 CYSTM1Q9H1C7 97 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 PRR34Q9NV39 138 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 TAC3Q9UHF0 121 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 V9GYV3 84 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 ABCA7Q8IZY2 2146 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 ALPK3Q96L96 1907 aa2.29□□□□□ -2.04
SPARCL1-208ENST00000535835 ATAD5Q96QE3 1844 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 QSER1Q2KHR3 1735 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 MON2Q7Z3U7 1717 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 UBR1Q8IWV7 1749 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 FAM208AQ9UK61 1670 aaKnown RBP2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 PAPPAQ13219 1627 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 IGHV1OR15-1A0A075B7D0 117 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 TRBV5-4A0A0C4DH59 114 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 K7ERJ3 54 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 GNRH2O43555 120 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 SH2D1AO60880 128 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 WISP3O95389 354 aaPredicted RBP2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 S100A3P33764 101 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 Q6ZRP5 223 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 FLVCR1-AS1Q8TAF5 88 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 FAM104AQ969W3 186 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 FAM167A-AS1Q96KT0 104 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 PLA2G12AQ9BZM1 189 aa2.28□□□□□ -2.04
SPARCL1-208ENST00000535835 KLK13Q9UKR3 277 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms