RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 MT-ND4LP03901 98 aa10.56□□□□□ -0.72
MSRB3-206ENST00000535664 RPL35AP18077 110 aaKnown RBP10.56□□□□□ -0.72
MSRB3-206ENST00000535664 RNASE4P34096 147 aaKnown RBP10.56□□□□□ -0.72
MSRB3-206ENST00000535664 CASC10Q5T4H9 136 aa10.56□□□□□ -0.72
MSRB3-206ENST00000535664 ANAPC16Q96DE5 110 aa10.56□□□□□ -0.72
MSRB3-206ENST00000535664 RPS10P5Q9NQ39 176 aa10.56□□□□□ -0.72
MSRB3-206ENST00000535664 STAB2Q8WWQ8 2551 aa10.56□□□□□ -0.72
MSRB3-206ENST00000535664 TRAV21A0A0B4J279 112 aa10.55□□□□□ -0.72
MSRB3-206ENST00000535664 PPP1R2P9O14990 202 aa10.55□□□□□ -0.72
MSRB3-206ENST00000535664 GATCO43716 136 aaKnown RBP10.55□□□□□ -0.72
MSRB3-206ENST00000535664 P01737 135 aa10.55□□□□□ -0.72
MSRB3-206ENST00000535664 AMBPP02760 352 aa10.55□□□□□ -0.72
MSRB3-206ENST00000535664 NUTF2P61970 127 aaKnown RBP10.55□□□□□ -0.72
MSRB3-206ENST00000535664 LINC01559Q495D7 138 aa10.55□□□□□ -0.72
MSRB3-206ENST00000535664 CT83Q5H943 113 aa10.55□□□□□ -0.72
MSRB3-206ENST00000535664 C15orf54Q8N8G6 183 aa10.55□□□□□ -0.72
MSRB3-206ENST00000535664 CTDSP1Q9GZU7 261 aa10.55□□□□□ -0.72
MSRB3-206ENST00000535664 RPP21Q9H633 154 aaKnown RBP10.55□□□□□ -0.72
MSRB3-206ENST00000535664 RETNQ9HD89 108 aa10.55□□□□□ -0.72
MSRB3-206ENST00000535664 TMEM242Q9NWH2 141 aa10.55□□□□□ -0.72
MSRB3-206ENST00000535664 TRAV12-3A0A0B4J271 114 aa10.54□□□□□ -0.72
MSRB3-206ENST00000535664 IGKV3D-20A0A0C4DH25 116 aa10.54□□□□□ -0.72
MSRB3-206ENST00000535664 H7BYZ3 331 aa10.54□□□□□ -0.72
MSRB3-206ENST00000535664 RPL19P84098 196 aaKnown RBP10.54□□□□□ -0.72
MSRB3-206ENST00000535664 ZNF705GA8MUZ8 300 aaPredicted RBP10.53□□□□□ -0.72
MSRB3-206ENST00000535664 SCO1O75880 301 aa10.53□□□□□ -0.72
MSRB3-206ENST00000535664 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
MSRB3-206ENST00000535664 DEFB135Q30KP9 77 aa10.53□□□□□ -0.72
MSRB3-206ENST00000535664 CSNK1G2-AS1Q8NCQ2 148 aa10.53□□□□□ -0.72
MSRB3-206ENST00000535664 DAZAP1Q96EP5 407 aaKnown RBP10.53□□□□□ -0.72
MSRB3-206ENST00000535664 C20orf144Q9BQM9 153 aa10.53□□□□□ -0.72
MSRB3-206ENST00000535664 C1QTNF4Q9BXJ3 329 aa10.53□□□□□ -0.72
MSRB3-206ENST00000535664 HUWE1Q7Z6Z7 4374 aaKnown RBP10.52□□□□□ -0.72
MSRB3-206ENST00000535664 INSP01308 110 aa10.52□□□□□ -0.73
MSRB3-206ENST00000535664 TDRG1Q3Y452 100 aa10.52□□□□□ -0.73
MSRB3-206ENST00000535664 C1orf158Q8N1D5 194 aa10.52□□□□□ -0.73
MSRB3-206ENST00000535664 OR2D3Q8NGH3 330 aa10.52□□□□□ -0.73
MSRB3-206ENST00000535664 XCL2Q9UBD3 114 aa10.52□□□□□ -0.73
MSRB3-206ENST00000535664 SMIM27A0A1W2PRY6 76 aa10.51□□□□□ -0.73
MSRB3-206ENST00000535664 TMEM189A5PLL7 270 aa10.51□□□□□ -0.73
MSRB3-206ENST00000535664 CXCL1P09341 107 aa10.51□□□□□ -0.73
MSRB3-206ENST00000535664 ANXA2RQ3ZCQ2 193 aa10.51□□□□□ -0.73
MSRB3-206ENST00000535664 CBLN2Q8IUK8 224 aa10.51□□□□□ -0.73
MSRB3-206ENST00000535664 YPEL4Q96NS1 127 aa10.51□□□□□ -0.73
MSRB3-206ENST00000535664 LINC00467Q9BRT7 94 aa10.51□□□□□ -0.73
MSRB3-206ENST00000535664 IL36BQ9NZH7 164 aa10.51□□□□□ -0.73
MSRB3-206ENST00000535664 NBEAL2Q6ZNJ1 2754 aa10.5□□□□□ -0.73
MSRB3-206ENST00000535664 TMSB15BA0A087X1C1 80 aa10.5□□□□□ -0.73
MSRB3-206ENST00000535664 ORM1P02763 201 aa10.5□□□□□ -0.73
MSRB3-206ENST00000535664 MUC21Q5SSG8 566 aa10.5□□□□□ -0.73
MSRB3-206ENST00000535664 TSKUQ8WUA8 353 aa10.5□□□□□ -0.73
MSRB3-206ENST00000535664 GTSF1Q8WW33 167 aa10.5□□□□□ -0.73
MSRB3-206ENST00000535664 IMMP2LQ96T52 175 aa10.5□□□□□ -0.73
MSRB3-206ENST00000535664 IGHV1OR15-1A0A075B7D0 117 aa10.49□□□□□ -0.73
MSRB3-206ENST00000535664 CXorf65A6NEN9 183 aa10.49□□□□□ -0.73
MSRB3-206ENST00000535664 A8MWL6 223 aa10.49□□□□□ -0.73
MSRB3-206ENST00000535664 TYMSP04818 313 aa10.49□□□□□ -0.73
MSRB3-206ENST00000535664 IGLC6P0CF74 106 aa10.49□□□□□ -0.73
MSRB3-206ENST00000535664 GZMBP10144 247 aa10.49□□□□□ -0.73
MSRB3-206ENST00000535664 RPS20P60866 119 aaKnown RBP10.49□□□□□ -0.73
MSRB3-206ENST00000535664 DNLZQ5SXM8 178 aa10.49□□□□□ -0.73
MSRB3-206ENST00000535664 TMEM88Q6PEY1 159 aa10.49□□□□□ -0.73
MSRB3-206ENST00000535664 NEU1Q99519 415 aa10.49□□□□□ -0.73
MSRB3-206ENST00000535664 GFRA4Q9GZZ7 299 aa10.49□□□□□ -0.73
MSRB3-206ENST00000535664 NAGKQ9UJ70 344 aa10.49□□□□□ -0.73
MSRB3-206ENST00000535664 GRIFINA4D1Z8 144 aa10.48□□□□□ -0.73
MSRB3-206ENST00000535664 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
MSRB3-206ENST00000535664 FOXA3P55318 350 aaPredicted RBP10.48□□□□□ -0.73
MSRB3-206ENST00000535664 ZNF705AQ6ZN79 300 aaPredicted RBP10.48□□□□□ -0.73
MSRB3-206ENST00000535664 OR11H2Q8NH07 326 aa10.48□□□□□ -0.73
MSRB3-206ENST00000535664 KCNS1Q96KK3 526 aa10.48□□□□□ -0.73
MSRB3-206ENST00000535664 PYGO2Q9BRQ0 406 aa10.48□□□□□ -0.73
MSRB3-206ENST00000535664 SMCO4Q9NRQ5 59 aa10.48□□□□□ -0.73
MSRB3-206ENST00000535664 TP53TG3Q9ULZ0 132 aa10.48□□□□□ -0.73
MSRB3-206ENST00000535664 A0A0J9YWU9 116 aa10.47□□□□□ -0.73
MSRB3-206ENST00000535664 GNRH2O43555 120 aa10.47□□□□□ -0.73
MSRB3-206ENST00000535664 MIFP14174 115 aa10.47□□□□□ -0.73
MSRB3-206ENST00000535664 TCL1AP56279 114 aa10.47□□□□□ -0.73
MSRB3-206ENST00000535664 ZFAND6Q6FIF0 208 aa10.47□□□□□ -0.73
MSRB3-206ENST00000535664 FAM159AQ6UWV7 190 aa10.47□□□□□ -0.73
MSRB3-206ENST00000535664 TMEM256Q8N2U0 113 aa10.47□□□□□ -0.73
MSRB3-206ENST00000535664 C11orf68Q9H3H3 251 aaKnown RBP10.47□□□□□ -0.73
MSRB3-206ENST00000535664 XKRY2A2RUG3 117 aa10.46□□□□□ -0.73
MSRB3-206ENST00000535664 CTRLP40313 264 aa10.46□□□□□ -0.73
MSRB3-206ENST00000535664 FAM3BP58499 235 aaPredicted RBP10.46□□□□□ -0.73
MSRB3-206ENST00000535664 ELOBQ15370 118 aa10.46□□□□□ -0.73
MSRB3-206ENST00000535664 NUP35Q8NFH5 326 aa10.46□□□□□ -0.73
MSRB3-206ENST00000535664 SSBP4Q9BWG4 385 aaPredicted RBP10.46□□□□□ -0.73
MSRB3-206ENST00000535664 IGHV3-16A0A0C4DH30 117 aa10.45□□□□□ -0.74
MSRB3-206ENST00000535664 NUPR2A6NF83 97 aa10.45□□□□□ -0.74
MSRB3-206ENST00000535664 HIGD1CA8MV81 97 aa10.45□□□□□ -0.74
MSRB3-206ENST00000535664 SNAI2O43623 268 aa10.45□□□□□ -0.74
MSRB3-206ENST00000535664 PRM2P04554 102 aa10.45□□□□□ -0.74
MSRB3-206ENST00000535664 MED14OSP0DP75 135 aa10.45□□□□□ -0.74
MSRB3-206ENST00000535664 RNASE3P12724 160 aaKnown RBP10.45□□□□□ -0.74
MSRB3-206ENST00000535664 ASIPP42127 132 aa10.45□□□□□ -0.74
MSRB3-206ENST00000535664 FER1L6-AS1Q8NA97 138 aa10.45□□□□□ -0.74
MSRB3-206ENST00000535664 LINC01587Q99440 93 aa10.45□□□□□ -0.74
MSRB3-206ENST00000535664 SCRT2Q9NQ03 307 aa10.45□□□□□ -0.74
MSRB3-206ENST00000535664 NAT8BQ9UHF3 227 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms