RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 MT-ND4LP03901 98 aa9.3□□□□□ -0.92
CHFR-210ENST00000535527 CRIP1P50238 77 aa9.3□□□□□ -0.92
CHFR-210ENST00000535527 ZNF575Q86XF7 245 aa9.3□□□□□ -0.92
CHFR-210ENST00000535527 TMEM256Q8N2U0 113 aa9.3□□□□□ -0.92
CHFR-210ENST00000535527 C11orf45Q8TAV5 145 aa9.3□□□□□ -0.92
CHFR-210ENST00000535527 TREM1Q9NP99 234 aa9.3□□□□□ -0.92
CHFR-210ENST00000535527 KLF12Q9Y4X4 402 aa9.3□□□□□ -0.92
CHFR-210ENST00000535527 LENEPQ9Y5L5 61 aa9.3□□□□□ -0.92
CHFR-210ENST00000535527 C11orf94C9JXX5 98 aa9.29□□□□□ -0.92
CHFR-210ENST00000535527 NHLRC2Q8NBF2 726 aa9.29□□□□□ -0.92
CHFR-210ENST00000535527 TMEM263Q8WUH6 116 aaKnown RBP9.29□□□□□ -0.92
CHFR-210ENST00000535527 LINC00476Q8WZB0 136 aa9.29□□□□□ -0.92
CHFR-210ENST00000535527 C11orf52Q96A22 123 aa9.29□□□□□ -0.92
CHFR-210ENST00000535527 ZC2HC1AQ96GY0 325 aa9.29□□□□□ -0.92
CHFR-210ENST00000535527 LINC00467Q9BRT7 94 aa9.29□□□□□ -0.92
CHFR-210ENST00000535527 IGHV1OR15-1A0A075B7D0 117 aa9.28□□□□□ -0.92
CHFR-210ENST00000535527 SERTM2A0A1B0GWG4 89 aa9.28□□□□□ -0.92
CHFR-210ENST00000535527 GCGP01275 180 aa9.28□□□□□ -0.92
CHFR-210ENST00000535527 BCL2P10415 239 aa9.28□□□□□ -0.92
CHFR-210ENST00000535527 RPL35P42766 123 aaKnown RBP9.28□□□□□ -0.92
CHFR-210ENST00000535527 LINC00612Q8N6U2 182 aa9.28□□□□□ -0.92
CHFR-210ENST00000535527 PHLDA1Q8WV24 401 aaPredicted RBP9.28□□□□□ -0.92
CHFR-210ENST00000535527 PYGO2Q9BRQ0 406 aa9.28□□□□□ -0.92
CHFR-210ENST00000535527 NIPSNAP3BQ9BS92 247 aa9.28□□□□□ -0.92
CHFR-210ENST00000535527 GSN-AS1Q9NRJ2 163 aa9.28□□□□□ -0.92
CHFR-210ENST00000535527 MDFICQ9P1T7 246 aa9.28□□□□□ -0.92
CHFR-210ENST00000535527 TRBV20OR9-2A0A075B6H5 130 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 LTAP01374 205 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 IGLV2-8P01709 118 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 AKR1C3P42330 323 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 SSTP61278 116 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 TMEM183BQ1AE95 376 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 ANXA2RQ3ZCQ2 193 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 FAM74A3Q4VXF1 159 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 DNLZQ5SXM8 178 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 HIST1H2BAQ96A08 127 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 C16orf74Q96GX8 76 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 NOP10Q9NPE3 64 aaKnown RBP9.27□□□□□ -0.93
CHFR-210ENST00000535527 MANBALQ9NQG1 85 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 KMT2AQ03164 3969 aa9.27□□□□□ -0.93
CHFR-210ENST00000535527 HECTD4Q9Y4D8 3996 aa9.26□□□□□ -0.93
CHFR-210ENST00000535527 TRBV6-1A0A0K0K1D8 114 aa9.26□□□□□ -0.93
CHFR-210ENST00000535527 CXorf65A6NEN9 183 aa9.26□□□□□ -0.93
CHFR-210ENST00000535527 GNRH2O43555 120 aa9.26□□□□□ -0.93
CHFR-210ENST00000535527 TYMSP04818 313 aa9.26□□□□□ -0.93
CHFR-210ENST00000535527 RHEBQ15382 184 aa9.26□□□□□ -0.93
CHFR-210ENST00000535527 ATRAIDQ6UW56 229 aa9.26□□□□□ -0.93
CHFR-210ENST00000535527 Q6ZTI0 123 aa9.26□□□□□ -0.93
CHFR-210ENST00000535527 COX8CQ7Z4L0 72 aa9.26□□□□□ -0.93
CHFR-210ENST00000535527 LINC00469Q8N7U9 141 aa9.26□□□□□ -0.93
CHFR-210ENST00000535527 DNAH6Q9C0G6 4158 aa9.26□□□□□ -0.93
CHFR-210ENST00000535527 IGKV3D-20A0A0C4DH25 116 aa9.25□□□□□ -0.93
CHFR-210ENST00000535527 PGPEP1LA6NFU8 196 aa9.25□□□□□ -0.93
CHFR-210ENST00000535527 LY6G6CO95867 125 aa9.25□□□□□ -0.93
CHFR-210ENST00000535527 TCL1AP56279 114 aa9.25□□□□□ -0.93
CHFR-210ENST00000535527 MEF2BQ02080 365 aaPredicted RBP9.25□□□□□ -0.93
CHFR-210ENST00000535527 TDRG1Q3Y452 100 aa9.25□□□□□ -0.93
CHFR-210ENST00000535527 CEMP1Q6PRD7 247 aaPredicted RBP9.25□□□□□ -0.93
CHFR-210ENST00000535527 FMC1Q96HJ9 113 aa9.25□□□□□ -0.93
CHFR-210ENST00000535527 MLST8Q9BVC4 326 aa9.25□□□□□ -0.93
CHFR-210ENST00000535527 NAGKQ9UJ70 344 aa9.25□□□□□ -0.93
CHFR-210ENST00000535527 IGHV3-16A0A0C4DH30 117 aa9.24□□□□□ -0.93
CHFR-210ENST00000535527 TMEM189A5PLL7 270 aa9.24□□□□□ -0.93
CHFR-210ENST00000535527 CBY3A6NI87 242 aa9.24□□□□□ -0.93
CHFR-210ENST00000535527 SH2D1AO60880 128 aa9.24□□□□□ -0.93
CHFR-210ENST00000535527 SPART-AS1P0CW21 52 aa9.24□□□□□ -0.93
CHFR-210ENST00000535527 PPT1P50897 306 aa9.24□□□□□ -0.93
CHFR-210ENST00000535527 TMEM183AQ8IXX5 376 aa9.24□□□□□ -0.93
CHFR-210ENST00000535527 MRPL16Q9NX20 251 aaKnown RBP9.24□□□□□ -0.93
CHFR-210ENST00000535527 TRAV21A0A0B4J279 112 aa9.23□□□□□ -0.93
CHFR-210ENST00000535527 C5orf52A6NGY3 159 aa9.23□□□□□ -0.93
CHFR-210ENST00000535527 LYRM9A8MSI8 78 aa9.23□□□□□ -0.93
CHFR-210ENST00000535527 C9JQL5 133 aa9.23□□□□□ -0.93
CHFR-210ENST00000535527 K7EQM0 130 aa9.23□□□□□ -0.93
CHFR-210ENST00000535527 PFN1P07737 140 aaKnown RBP9.23□□□□□ -0.93
CHFR-210ENST00000535527 DEFB130BP0DP73 79 aa9.23□□□□□ -0.93
CHFR-210ENST00000535527 DEFB130AP0DP74 79 aa9.23□□□□□ -0.93
CHFR-210ENST00000535527 SRSF3P84103 164 aaKnown RBP9.23□□□□□ -0.93
CHFR-210ENST00000535527 ZNF506Q5JVG8 444 aa9.23□□□□□ -0.93
CHFR-210ENST00000535527 ZNF493Q6ZR52 646 aa9.23□□□□□ -0.93
CHFR-210ENST00000535527 GAGE12BA1L429 117 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 SPINK4O60575 86 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 GAGE7O76087 117 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 GAGE12FP0CL80 117 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 GAGE12GP0CL81 117 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 GAGE12IP0CL82 117 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 RNASE3P12724 160 aaKnown RBP9.22□□□□□ -0.93
CHFR-210ENST00000535527 HOXA5P20719 270 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 UBE2G1P62253 170 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 RPL19P84098 196 aaKnown RBP9.22□□□□□ -0.93
CHFR-210ENST00000535527 DAZ2Q13117 558 aaKnown RBP9.22□□□□□ -0.93
CHFR-210ENST00000535527 ZNF674Q2M3X9 581 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 LBHQ53QV2 105 aaPredicted RBP9.22□□□□□ -0.93
CHFR-210ENST00000535527 CENPWQ5EE01 88 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 IBA57Q5T440 356 aaKnown RBP9.22□□□□□ -0.93
CHFR-210ENST00000535527 NDFIP1Q9BT67 221 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 VAX2Q9UIW0 290 aa9.22□□□□□ -0.93
CHFR-210ENST00000535527 TIMM8BQ9Y5J9 83 aaPredicted RBP9.22□□□□□ -0.93
CHFR-210ENST00000535527 RBFOX3A6NFN3 312 aa9.21□□□□□ -0.94
CHFR-210ENST00000535527 FBLL1A6NHQ2 334 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 283.8 ms