RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 Q6ZTI0 123 aa15.46■□□□□ 0.07
SSPN-204ENST00000535504 C9orf62Q8N4C0 152 aa15.46■□□□□ 0.07
SSPN-204ENST00000535504 LINC00612Q8N6U2 182 aa15.46■□□□□ 0.07
SSPN-204ENST00000535504 TVP23CQ96ET8 276 aa15.46■□□□□ 0.07
SSPN-204ENST00000535504 ZFP30Q9Y2G7 519 aa15.46■□□□□ 0.07
SSPN-204ENST00000535504 IGLV2-11P01706 119 aa15.45■□□□□ 0.06
SSPN-204ENST00000535504 Q86TA4 180 aa15.45■□□□□ 0.06
SSPN-204ENST00000535504 TRAV1-1A0A0B4J248 108 aa15.44■□□□□ 0.06
SSPN-204ENST00000535504 SPINK4O60575 86 aa15.44■□□□□ 0.06
SSPN-204ENST00000535504 Q6ZQT7 251 aa15.44■□□□□ 0.06
SSPN-204ENST00000535504 LINC00479Q96M42 142 aa15.44■□□□□ 0.06
SSPN-204ENST00000535504 TXNDC17Q9BRA2 123 aa15.44■□□□□ 0.06
SSPN-204ENST00000535504 GNG13Q9P2W3 67 aa15.44■□□□□ 0.06
SSPN-204ENST00000535504 MRPL16Q9NX20 251 aaKnown RBP15.43■□□□□ 0.06
SSPN-204ENST00000535504 FABP5P3A8MUU1 101 aa15.42■□□□□ 0.06
SSPN-204ENST00000535504 NUDT3O95989 172 aa15.42■□□□□ 0.06
SSPN-204ENST00000535504 C18orf15Q96N68 181 aa15.42■□□□□ 0.06
SSPN-204ENST00000535504 DYNC2H1Q8NCM8 4307 aaKnown RBP15.41■□□□□ 0.06
SSPN-204ENST00000535504 A0A1B0GVG6 124 aa15.41■□□□□ 0.06
SSPN-204ENST00000535504 TYMSP04818 313 aa15.41■□□□□ 0.06
SSPN-204ENST00000535504 MDFICQ9P1T7 246 aa15.41■□□□□ 0.06
SSPN-204ENST00000535504 TRBV6-1A0A0K0K1D8 114 aa15.4■□□□□ 0.06
SSPN-204ENST00000535504 M0R2P5 195 aa15.4■□□□□ 0.06
SSPN-204ENST00000535504 S100A4P26447 101 aaKnown RBP15.4■□□□□ 0.06
SSPN-204ENST00000535504 TAGLN2P37802 199 aaKnown RBP15.4■□□□□ 0.06
SSPN-204ENST00000535504 GNRH2O43555 120 aa15.39■□□□□ 0.05
SSPN-204ENST00000535504 BLOC1S1P78537 153 aa15.39■□□□□ 0.05
SSPN-204ENST00000535504 SLAQ13239 276 aa15.39■□□□□ 0.05
SSPN-204ENST00000535504 POM121L12Q8N7R1 296 aa15.39■□□□□ 0.05
SSPN-204ENST00000535504 TRAV26-1A0A087WT03 109 aa15.38■□□□□ 0.05
SSPN-204ENST00000535504 IGHV3-16A0A0C4DH30 117 aa15.38■□□□□ 0.05
SSPN-204ENST00000535504 SCO2A0A1W2PP80 73 aa15.38■□□□□ 0.05
SSPN-204ENST00000535504 ORM1P02763 201 aa15.38■□□□□ 0.05
SSPN-204ENST00000535504 ZNF80P51504 273 aaPredicted RBP15.38■□□□□ 0.05
SSPN-204ENST00000535504 FAM162BQ5T6X4 162 aa15.38■□□□□ 0.05
SSPN-204ENST00000535504 ALMS1Q8TCU4 4167 aa15.37■□□□□ 0.05
SSPN-204ENST00000535504 LTAP01374 205 aa15.37■□□□□ 0.05
SSPN-204ENST00000535504 TRGV4A0A0C4DH28 118 aa15.36■□□□□ 0.05
SSPN-204ENST00000535504 A0A0J9YY99 117 aa15.36■□□□□ 0.05
SSPN-204ENST00000535504 IGHV3-53P01767 116 aa15.36■□□□□ 0.05
SSPN-204ENST00000535504 ASIPP42127 132 aa15.36■□□□□ 0.05
SSPN-204ENST00000535504 CCL18P55774 89 aa15.36■□□□□ 0.05
SSPN-204ENST00000535504 RNF212Q495C1 297 aa15.36■□□□□ 0.05
SSPN-204ENST00000535504 ALKAL2Q6UX46 152 aa15.36■□□□□ 0.05
SSPN-204ENST00000535504 RASL10AQ92737 203 aa15.36■□□□□ 0.05
SSPN-204ENST00000535504 B4DEV8 164 aa15.35■□□□□ 0.05
SSPN-204ENST00000535504 H3BNG1 76 aa15.35■□□□□ 0.05
SSPN-204ENST00000535504 PDE6DO43924 150 aa15.35■□□□□ 0.05
SSPN-204ENST00000535504 NKX2-5P52952 324 aaPredicted RBP15.35■□□□□ 0.05
SSPN-204ENST00000535504 BAGE2Q86Y30 109 aa15.35■□□□□ 0.05
SSPN-204ENST00000535504 FAM3BP58499 235 aaPredicted RBP15.34■□□□□ 0.05
SSPN-204ENST00000535504 CCL20P78556 96 aa15.34■□□□□ 0.05
SSPN-204ENST00000535504 MEF2BQ02080 365 aaPredicted RBP15.34■□□□□ 0.05
SSPN-204ENST00000535504 OR4C5Q8NGB2 326 aa15.34■□□□□ 0.05
SSPN-204ENST00000535504 ZC2HC1AQ96GY0 325 aa15.34■□□□□ 0.05
SSPN-204ENST00000535504 C9JCJ5 164 aa15.33■□□□□ 0.04
SSPN-204ENST00000535504 PAX4O43316 350 aa15.33■□□□□ 0.04
SSPN-204ENST00000535504 BCL2P10415 239 aa15.33■□□□□ 0.04
SSPN-204ENST00000535504 HOXA5P20719 270 aa15.33■□□□□ 0.04
SSPN-204ENST00000535504 PLECQ15149 4684 aaKnown RBP15.33■□□□□ 0.04
SSPN-204ENST00000535504 COX8CQ7Z4L0 72 aa15.33■□□□□ 0.04
SSPN-204ENST00000535504 PRO0255Q9UI72 69 aa15.33■□□□□ 0.04
SSPN-204ENST00000535504 TRAV4A0A0B4J268 109 aa15.32■□□□□ 0.04
SSPN-204ENST00000535504 SH2D1AO60880 128 aa15.32■□□□□ 0.04
SSPN-204ENST00000535504 PCNPQ8WW12 178 aaKnown RBP15.32■□□□□ 0.04
SSPN-204ENST00000535504 VAX2Q9UIW0 290 aa15.32■□□□□ 0.04
SSPN-204ENST00000535504 MUC4Q99102 2169 aa15.32■□□□□ 0.04
SSPN-204ENST00000535504 ZNF876PQ49A33 203 aa15.31■□□□□ 0.04
SSPN-204ENST00000535504 C11orf21Q9P2W6 132 aa15.31■□□□□ 0.04
SSPN-204ENST00000535504 LYSTQ99698 3801 aa15.3■□□□□ 0.04
SSPN-204ENST00000535504 M0R036 132 aa15.3■□□□□ 0.04
SSPN-204ENST00000535504 CIDEAO60543 219 aa15.3■□□□□ 0.04
SSPN-204ENST00000535504 RPL35P42766 123 aaKnown RBP15.3■□□□□ 0.04
SSPN-204ENST00000535504 ZNF674Q2M3X9 581 aa15.3■□□□□ 0.04
SSPN-204ENST00000535504 NHLRC2Q8NBF2 726 aa15.3■□□□□ 0.04
SSPN-204ENST00000535504 SYT8Q8NBV8 401 aa15.3■□□□□ 0.04
SSPN-204ENST00000535504 C11orf52Q96A22 123 aa15.3■□□□□ 0.04
SSPN-204ENST00000535504 MED9Q9NWA0 146 aa15.3■□□□□ 0.04
SSPN-204ENST00000535504 HHLA3Q9XRX5 114 aa15.3■□□□□ 0.04
SSPN-204ENST00000535504 ICOSQ9Y6W8 199 aa15.3■□□□□ 0.04
SSPN-204ENST00000535504 SACSQ9NZJ4 4579 aa15.29■□□□□ 0.04
SSPN-204ENST00000535504 C9orf85Q96MD7 179 aa15.29■□□□□ 0.04
SSPN-204ENST00000535504 BIN3Q9NQY0 253 aa15.29■□□□□ 0.04
SSPN-204ENST00000535504 IGKV3D-20A0A0C4DH25 116 aa15.28■□□□□ 0.04
SSPN-204ENST00000535504 PRR27Q6MZM9 219 aa15.28■□□□□ 0.04
SSPN-204ENST00000535504 DAZAP1Q96EP5 407 aaKnown RBP15.28■□□□□ 0.04
SSPN-204ENST00000535504 SFTA3P0C7M3 94 aa15.27■□□□□ 0.04
SSPN-204ENST00000535504 GNG4P50150 75 aa15.27■□□□□ 0.04
SSPN-204ENST00000535504 LINC01559Q495D7 138 aa15.27■□□□□ 0.04
SSPN-204ENST00000535504 PTH2Q96A98 100 aa15.27■□□□□ 0.04
SSPN-204ENST00000535504 ZNF479Q96JC4 524 aa15.27■□□□□ 0.04
SSPN-204ENST00000535504 IL36BQ9NZH7 164 aa15.27■□□□□ 0.04
SSPN-204ENST00000535504 KRBOX1C9JBD0 128 aa15.26■□□□□ 0.03
SSPN-204ENST00000535504 H3BVH4 76 aa15.26■□□□□ 0.03
SSPN-204ENST00000535504 MGST1P10620 155 aaKnown RBP15.26■□□□□ 0.03
SSPN-204ENST00000535504 FHL2Q14192 279 aa15.26■□□□□ 0.03
SSPN-204ENST00000535504 MRPL23Q16540 153 aaKnown RBP15.26■□□□□ 0.03
SSPN-204ENST00000535504 SMIM12Q96EX1 92 aa15.26■□□□□ 0.03
SSPN-204ENST00000535504 BOLA1Q9Y3E2 137 aa15.26■□□□□ 0.03
SSPN-204ENST00000535504 PHLDA3Q9Y5J5 127 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms