RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 HSD17B11Q8NBQ5 300 aa11.08□□□□□ -0.64
CLSTN3-204ENST00000535313 TRAV8-1A0A0A6YYK1 113 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 TRAV4A0A0B4J268 109 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 F6UZH7 168 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 K7EQD1 137 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 M0R2P5 195 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 ARPC5O15511 151 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 GNRH2O43555 120 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 ORM1P02763 201 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 ARL14EPLP0DKL9 152 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 GYPEP15421 78 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 GNG5P63218 68 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 OR4C5Q8NGB2 326 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 OR2G3Q8NGZ4 309 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 NDFIP1Q9BT67 221 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 SDF2L1Q9HCN8 221 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 CYTL1Q9NRR1 136 aa11.07□□□□□ -0.64
CLSTN3-204ENST00000535313 DNAH5Q8TE73 4624 aa11.06□□□□□ -0.64
CLSTN3-204ENST00000535313 TRAV9-2A0A087WT02 112 aa11.06□□□□□ -0.64
CLSTN3-204ENST00000535313 IGHV3-16A0A0C4DH30 117 aa11.06□□□□□ -0.64
CLSTN3-204ENST00000535313 SERTM2A0A1B0GWG4 89 aa11.06□□□□□ -0.64
CLSTN3-204ENST00000535313 MBP02144 154 aa11.06□□□□□ -0.64
CLSTN3-204ENST00000535313 STAG3L2P0CL84 134 aa11.06□□□□□ -0.64
CLSTN3-204ENST00000535313 STAG3L3P0CL85 134 aa11.06□□□□□ -0.64
CLSTN3-204ENST00000535313 KRTAP10-2P60368 255 aa11.06□□□□□ -0.64
CLSTN3-204ENST00000535313 TVP23CQ96ET8 276 aa11.06□□□□□ -0.64
CLSTN3-204ENST00000535313 KCNS1Q96KK3 526 aa11.06□□□□□ -0.64
CLSTN3-204ENST00000535313 PSMG3Q9BT73 122 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-204ENST00000535313 HMSDA8MTL9 139 aa11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 C9JCJ5 164 aa11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 K7EQM0 130 aa11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 EREGO14944 169 aa11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 TYMSP04818 313 aa11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 Q6ZRN7 208 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 NFE4Q86UQ8 179 aa11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 MAPKAPK5-AS1Q8N8E1 139 aa11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 C5orf17Q8NAS9 161 aa11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 RAB24Q969Q5 203 aa11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 TXNDC17Q9BRA2 123 aa11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 LY96Q9Y6Y9 160 aa11.05□□□□□ -0.64
CLSTN3-204ENST00000535313 ATP6V0CP27449 155 aa11.04□□□□□ -0.64
CLSTN3-204ENST00000535313 GCHFRP30047 84 aa11.04□□□□□ -0.64
CLSTN3-204ENST00000535313 SERF2P84101 59 aa11.04□□□□□ -0.64
CLSTN3-204ENST00000535313 RPL7L1Q6DKI1 246 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-204ENST00000535313 KCNRGQ8N5I3 272 aa11.04□□□□□ -0.64
CLSTN3-204ENST00000535313 SGK494Q96LW2 274 aa11.04□□□□□ -0.64
CLSTN3-204ENST00000535313 KRTAP4-5Q9BYR2 181 aa11.04□□□□□ -0.64
CLSTN3-204ENST00000535313 APOBP04114 4563 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-204ENST00000535313 C1QBP02746 253 aa11.03□□□□□ -0.64
CLSTN3-204ENST00000535313 TCRAP04437 139 aa11.03□□□□□ -0.64
CLSTN3-204ENST00000535313 EVI2AP22794 236 aa11.03□□□□□ -0.64
CLSTN3-204ENST00000535313 ERVFC1-1P60608 527 aa11.03□□□□□ -0.64
CLSTN3-204ENST00000535313 ZNF345Q14585 488 aa11.03□□□□□ -0.64
CLSTN3-204ENST00000535313 SH2D6Q7Z4S9 175 aa11.03□□□□□ -0.64
CLSTN3-204ENST00000535313 AKAP14Q86UN6 197 aa11.03□□□□□ -0.64
CLSTN3-204ENST00000535313 INO80EQ8NBZ0 244 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-204ENST00000535313 TMEM167BQ9NRX6 74 aa11.03□□□□□ -0.64
CLSTN3-204ENST00000535313 K7EP13 123 aa11.02□□□□□ -0.65
CLSTN3-204ENST00000535313 TAAR5O14804 337 aa11.02□□□□□ -0.65
CLSTN3-204ENST00000535313 CXorf1O96002 111 aa11.02□□□□□ -0.65
CLSTN3-204ENST00000535313 SUN5Q8TC36 379 aa11.02□□□□□ -0.65
CLSTN3-204ENST00000535313 ACTR3CQ9C0K3 210 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-204ENST00000535313 SH3BGRL3Q9H299 93 aa11.02□□□□□ -0.65
CLSTN3-204ENST00000535313 PSG8Q9UQ74 426 aa11.02□□□□□ -0.65
CLSTN3-204ENST00000535313 LGALSLQ3ZCW2 172 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-204ENST00000535313 ZFP69Q49AA0 526 aa11.01□□□□□ -0.65
CLSTN3-204ENST00000535313 WFDC10BQ8IUB3 73 aa11.01□□□□□ -0.65
CLSTN3-204ENST00000535313 NHLRC2Q8NBF2 726 aa11.01□□□□□ -0.65
CLSTN3-204ENST00000535313 PGPEP1Q9NXJ5 209 aa11.01□□□□□ -0.65
CLSTN3-204ENST00000535313 TNFRSF18Q9Y5U5 241 aa11.01□□□□□ -0.65
CLSTN3-204ENST00000535313 FBLL1A6NHQ2 334 aaKnown RBP11□□□□□ -0.65
CLSTN3-204ENST00000535313 GCGP01275 180 aa11□□□□□ -0.65
CLSTN3-204ENST00000535313 PFN1P07737 140 aaKnown RBP11□□□□□ -0.65
CLSTN3-204ENST00000535313 GATA1P15976 413 aaPredicted RBP11□□□□□ -0.65
CLSTN3-204ENST00000535313 SUMO1P63165 101 aaKnown RBP11□□□□□ -0.65
CLSTN3-204ENST00000535313 ZNF876PQ49A33 203 aa11□□□□□ -0.65
CLSTN3-204ENST00000535313 SMUG1Q53HV7 270 aa11□□□□□ -0.65
CLSTN3-204ENST00000535313 MSRB1Q9NZV6 116 aa11□□□□□ -0.65
CLSTN3-204ENST00000535313 EPDR1Q9UM22 224 aa11□□□□□ -0.65
CLSTN3-204ENST00000535313 BORCS7-ASMTA0A0B4J1R7 106 aa10.99□□□□□ -0.65
CLSTN3-204ENST00000535313 LOC100131303A0A0U1RQF7 123 aa10.99□□□□□ -0.65
CLSTN3-204ENST00000535313 GGTLC3B5MD39 225 aa10.99□□□□□ -0.65
CLSTN3-204ENST00000535313 DNAH10OSP0CZ25 163 aa10.99□□□□□ -0.65
CLSTN3-204ENST00000535313 PPT1P50897 306 aa10.99□□□□□ -0.65
CLSTN3-204ENST00000535313 ZNF80P51504 273 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-204ENST00000535313 FLI1Q01543 452 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-204ENST00000535313 TMUB2Q71RG4 321 aa10.99□□□□□ -0.65
CLSTN3-204ENST00000535313 PRNTQ86SH4 94 aa10.99□□□□□ -0.65
CLSTN3-204ENST00000535313 C10orf126Q8N4M7 172 aa10.99□□□□□ -0.65
CLSTN3-204ENST00000535313 CYB561D1Q8N8Q1 229 aa10.99□□□□□ -0.65
CLSTN3-204ENST00000535313 BCL2L11O43521 198 aa10.98□□□□□ -0.65
CLSTN3-204ENST00000535313 CIDEAO60543 219 aa10.98□□□□□ -0.65
CLSTN3-204ENST00000535313 IGLV2-11P01706 119 aa10.98□□□□□ -0.65
CLSTN3-204ENST00000535313 CRYGDP07320 174 aa10.98□□□□□ -0.65
CLSTN3-204ENST00000535313 SAPCD1Q5SSQ6 148 aa10.98□□□□□ -0.65
CLSTN3-204ENST00000535313 Q8N1X5 172 aa10.98□□□□□ -0.65
CLSTN3-204ENST00000535313 C9orf62Q8N4C0 152 aa10.98□□□□□ -0.65
CLSTN3-204ENST00000535313 TMEM75Q8N9X5 138 aa10.98□□□□□ -0.65
CLSTN3-204ENST00000535313 PRADC1Q9BSG0 188 aa10.98□□□□□ -0.65
CLSTN3-204ENST00000535313 A0A1W2PRE2 83 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms