RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 TVP23CQ96ET8 276 aa11.26□□□□□ -0.61
CCDC180-213ENST00000534189 KCNS1Q96KK3 526 aa11.26□□□□□ -0.61
CCDC180-213ENST00000534189 UPK3BQ9BT76 320 aa11.26□□□□□ -0.61
CCDC180-213ENST00000534189 HHLA3Q9XRX5 114 aa11.26□□□□□ -0.61
CCDC180-213ENST00000534189 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
CCDC180-213ENST00000534189 ICOSQ9Y6W8 199 aa11.26□□□□□ -0.61
CCDC180-213ENST00000534189 UBR4Q5T4S7 5183 aa11.26□□□□□ -0.61
CCDC180-213ENST00000534189 TRGV4A0A0C4DH28 118 aa11.25□□□□□ -0.61
CCDC180-213ENST00000534189 CTXND1A0A1B0GTU2 59 aa11.25□□□□□ -0.61
CCDC180-213ENST00000534189 FBLL1A6NHQ2 334 aaKnown RBP11.25□□□□□ -0.61
CCDC180-213ENST00000534189 F6UZH7 168 aa11.25□□□□□ -0.61
CCDC180-213ENST00000534189 ARPC5O15511 151 aa11.25□□□□□ -0.61
CCDC180-213ENST00000534189 AKR1C8PQ5T2L2 129 aa11.25□□□□□ -0.61
CCDC180-213ENST00000534189 SGK494Q96LW2 274 aa11.25□□□□□ -0.61
CCDC180-213ENST00000534189 SDF2L1Q9HCN8 221 aa11.25□□□□□ -0.61
CCDC180-213ENST00000534189 EPDR1Q9UM22 224 aa11.25□□□□□ -0.61
CCDC180-213ENST00000534189 PSG8Q9UQ74 426 aa11.25□□□□□ -0.61
CCDC180-213ENST00000534189 A0A1W2PRE2 83 aa11.24□□□□□ -0.61
CCDC180-213ENST00000534189 GNRH2O43555 120 aa11.24□□□□□ -0.61
CCDC180-213ENST00000534189 CDK2AP2O75956 126 aa11.24□□□□□ -0.61
CCDC180-213ENST00000534189 CRYBA4P53673 196 aa11.24□□□□□ -0.61
CCDC180-213ENST00000534189 FLI1Q01543 452 aaPredicted RBP11.24□□□□□ -0.61
CCDC180-213ENST00000534189 FHL2Q14192 279 aa11.24□□□□□ -0.61
CCDC180-213ENST00000534189 CYB561D1Q8N8Q1 229 aa11.24□□□□□ -0.61
CCDC180-213ENST00000534189 C8orf49Q96NF6 230 aa11.24□□□□□ -0.61
CCDC180-213ENST00000534189 IGHV3-16A0A0C4DH30 117 aa11.23□□□□□ -0.61
CCDC180-213ENST00000534189 G3V3Q6 166 aa11.23□□□□□ -0.61
CCDC180-213ENST00000534189 M0R2P5 195 aa11.23□□□□□ -0.61
CCDC180-213ENST00000534189 MRPL23Q16540 153 aaKnown RBP11.23□□□□□ -0.61
CCDC180-213ENST00000534189 ZFP69Q49AA0 526 aa11.23□□□□□ -0.61
CCDC180-213ENST00000534189 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
CCDC180-213ENST00000534189 A0A1W2PPQ1 181 aa11.22□□□□□ -0.61
CCDC180-213ENST00000534189 GGTLC3B5MD39 225 aa11.22□□□□□ -0.61
CCDC180-213ENST00000534189 GCGP01275 180 aa11.22□□□□□ -0.61
CCDC180-213ENST00000534189 TYMSP04818 313 aa11.22□□□□□ -0.61
CCDC180-213ENST00000534189 SMUG1Q53HV7 270 aa11.22□□□□□ -0.61
CCDC180-213ENST00000534189 PRNTQ86SH4 94 aa11.22□□□□□ -0.61
CCDC180-213ENST00000534189 Q8N1X5 172 aa11.22□□□□□ -0.61
CCDC180-213ENST00000534189 TMEM75Q8N9X5 138 aa11.22□□□□□ -0.61
CCDC180-213ENST00000534189 NKX6-2Q9C056 277 aaPredicted RBP11.22□□□□□ -0.61
CCDC180-213ENST00000534189 TRAV4A0A0B4J268 109 aa11.21□□□□□ -0.61
CCDC180-213ENST00000534189 IFNA7P01567 189 aa11.21□□□□□ -0.61
CCDC180-213ENST00000534189 SFTA3P0C7M3 94 aa11.21□□□□□ -0.61
CCDC180-213ENST00000534189 PPT1P50897 306 aa11.21□□□□□ -0.61
CCDC180-213ENST00000534189 ZNF726P1Q15940 193 aa11.21□□□□□ -0.61
CCDC180-213ENST00000534189 OR4C5Q8NGB2 326 aa11.21□□□□□ -0.61
CCDC180-213ENST00000534189 PCNPQ8WW12 178 aaKnown RBP11.21□□□□□ -0.61
CCDC180-213ENST00000534189 ZNF479Q96JC4 524 aa11.21□□□□□ -0.61
CCDC180-213ENST00000534189 CYTL1Q9NRR1 136 aa11.21□□□□□ -0.61
CCDC180-213ENST00000534189 DMBT1Q9UGM3 2413 aaPredicted RBP11.21□□□□□ -0.61
CCDC180-213ENST00000534189 IGLV2-11P01706 119 aa11.2□□□□□ -0.62
CCDC180-213ENST00000534189 NEGR1Q7Z3B1 354 aa11.2□□□□□ -0.62
CCDC180-213ENST00000534189 DNAH5Q8TE73 4624 aa11.2□□□□□ -0.62
CCDC180-213ENST00000534189 SMLR1H3BR10 107 aa11.19□□□□□ -0.62
CCDC180-213ENST00000534189 ORM1P02763 201 aa11.19□□□□□ -0.62
CCDC180-213ENST00000534189 PFN1P07737 140 aaKnown RBP11.19□□□□□ -0.62
CCDC180-213ENST00000534189 BTF3P20290 206 aaKnown RBP11.19□□□□□ -0.62
CCDC180-213ENST00000534189 ZNF80P51504 273 aaPredicted RBP11.19□□□□□ -0.62
CCDC180-213ENST00000534189 UBE2G2P60604 165 aa11.19□□□□□ -0.62
CCDC180-213ENST00000534189 STOML3Q8TAV4 291 aa11.19□□□□□ -0.62
CCDC180-213ENST00000534189 MAP1LC3B2A6NCE7 125 aa11.18□□□□□ -0.62
CCDC180-213ENST00000534189 SIVA1O15304 175 aa11.18□□□□□ -0.62
CCDC180-213ENST00000534189 SRIP30626 198 aa11.18□□□□□ -0.62
CCDC180-213ENST00000534189 FGF8P55075 233 aaPredicted RBP11.18□□□□□ -0.62
CCDC180-213ENST00000534189 TNP2Q05952 138 aa11.18□□□□□ -0.62
CCDC180-213ENST00000534189 ZNF345Q14585 488 aa11.18□□□□□ -0.62
CCDC180-213ENST00000534189 KCNRGQ8N5I3 272 aa11.18□□□□□ -0.62
CCDC180-213ENST00000534189 HIST1H2BAQ96A08 127 aa11.18□□□□□ -0.62
CCDC180-213ENST00000534189 MAP1LC3BQ9GZQ8 125 aa11.18□□□□□ -0.62
CCDC180-213ENST00000534189 FAM74A7A6NL05 159 aa11.17□□□□□ -0.62
CCDC180-213ENST00000534189 HMSDA8MTL9 139 aa11.17□□□□□ -0.62
CCDC180-213ENST00000534189 C9JCJ5 164 aa11.17□□□□□ -0.62
CCDC180-213ENST00000534189 K7EQD1 137 aa11.17□□□□□ -0.62
CCDC180-213ENST00000534189 PEX7O00628 323 aa11.17□□□□□ -0.62
CCDC180-213ENST00000534189 NXPH4O95158 308 aa11.17□□□□□ -0.62
CCDC180-213ENST00000534189 GYPEP15421 78 aa11.17□□□□□ -0.62
CCDC180-213ENST00000534189 ZNF876PQ49A33 203 aa11.17□□□□□ -0.62
CCDC180-213ENST00000534189 LYPD5Q6UWN5 251 aa11.17□□□□□ -0.62
CCDC180-213ENST00000534189 LINC00479Q96M42 142 aa11.17□□□□□ -0.62
CCDC180-213ENST00000534189 C11orf21Q9P2W6 132 aa11.17□□□□□ -0.62
CCDC180-213ENST00000534189 TRAV34A0A0B4J273 112 aa11.16□□□□□ -0.62
CCDC180-213ENST00000534189 A0A0D9SG52 128 aa11.16□□□□□ -0.62
CCDC180-213ENST00000534189 CIDEAO60543 219 aa11.16□□□□□ -0.62
CCDC180-213ENST00000534189 TXNDC17Q9BRA2 123 aa11.16□□□□□ -0.62
CCDC180-213ENST00000534189 KRTAP1-5Q9BYS1 174 aa11.16□□□□□ -0.62
CCDC180-213ENST00000534189 ARL2-SNX15V9GYD0 113 aa11.16□□□□□ -0.62
CCDC180-213ENST00000534189 FABP5P3A8MUU1 101 aa11.15□□□□□ -0.62
CCDC180-213ENST00000534189 KANTRA0A1W2PQU2 76 aa11.14□□□□□ -0.63
CCDC180-213ENST00000534189 UMAD1C9J7I0 102 aa11.14□□□□□ -0.63
CCDC180-213ENST00000534189 SEC11BP0C7V7 166 aa11.14□□□□□ -0.63
CCDC180-213ENST00000534189 EIF5AP63241 154 aaKnown RBP11.14□□□□□ -0.63
CCDC180-213ENST00000534189 SH2D6Q7Z4S9 175 aa11.14□□□□□ -0.63
CCDC180-213ENST00000534189 PTH2Q96A98 100 aa11.14□□□□□ -0.63
CCDC180-213ENST00000534189 C9orf85Q96MD7 179 aa11.14□□□□□ -0.63
CCDC180-213ENST00000534189 TCEAL7Q9BRU2 100 aa11.14□□□□□ -0.63
CCDC180-213ENST00000534189 TRAV9-2A0A087WT02 112 aa11.13□□□□□ -0.63
CCDC180-213ENST00000534189 GATA1P15976 413 aaPredicted RBP11.13□□□□□ -0.63
CCDC180-213ENST00000534189 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
CCDC180-213ENST00000534189 FHITP49789 147 aa11.13□□□□□ -0.63
CCDC180-213ENST00000534189 UBE2G1P62253 170 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms